# HG changeset patch
# User devteam
# Date 1390832823 18000
# Node ID a0c8dc671a239f3deeb9eca8cb3a0c2b3abbd237
Imported from capsule None
diff -r 000000000000 -r a0c8dc671a23 ccat_wrapper.py
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/ccat_wrapper.py Mon Jan 27 09:27:03 2014 -0500
@@ -0,0 +1,41 @@
+import sys, subprocess, tempfile, shutil, os.path
+
+CCAT_BINARY = "CCAT"
+
+def get_top_count( filename ):
+ for line in open( filename ):
+ if line.startswith( 'outputNum' ):
+ return int( line.split()[-1].strip() )
+
+def stop_err( tmp_dir, exception ):
+ print >> sys.stderr, "Error running CCAT."
+ shutil.rmtree( tmp_dir ) #some error has occurred, provide info and remove possibly non-empty temp directory
+ raise exception
+
+def main():
+ input_tag_file = sys.argv[1]
+ input_control_file = sys.argv[2]
+ chrom_info_file = sys.argv[3]
+ input_config_file = sys.argv[4]
+ project_name = sys.argv[5]
+ output_peak_file = sys.argv[6]
+ output_region_file = sys.argv[7]
+ output_top_file = sys.argv[8]
+ output_log_file = sys.argv[9]
+
+ tmp_dir = tempfile.mkdtemp()
+ try:
+ assert os.path.exists( chrom_info_file ), "The required chromosome length file does not exist."
+ proc = subprocess.Popen( args="%s %s > %s" % ( CCAT_BINARY, " ".join( map( lambda x: "'%s'" % x, [ input_tag_file, input_control_file, chrom_info_file, input_config_file, project_name ] ) ), output_log_file ), shell=True, cwd=tmp_dir )
+ proc.wait()
+ if proc.returncode:
+ raise Exception( "Error code: %i" % proc.returncode )
+ output_num = get_top_count( input_config_file )
+ shutil.move( os.path.join( tmp_dir, "%s.significant.peak" % project_name ), output_peak_file )
+ shutil.move( os.path.join( tmp_dir, "%s.significant.region" % project_name ), output_region_file )
+ shutil.move( os.path.join( tmp_dir, "%s.top%i.peak" % ( project_name, output_num ) ), output_top_file )
+ except Exception, e:
+ return stop_err( tmp_dir, e )
+ os.rmdir( tmp_dir ) #clean up empty temp working directory
+
+if __name__ == "__main__": main()
diff -r 000000000000 -r a0c8dc671a23 ccat_wrapper.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/ccat_wrapper.xml Mon Jan 27 09:27:03 2014 -0500
@@ -0,0 +1,148 @@
+
+ Control-based ChIP-seq Analysis Tool
+
+ CCAT
+
+ ccat_wrapper.py '$input_tag_file' '$input_control_file' '$chromInfo'
+ #if str( $options_type[ 'options_type_selector' ] ) == 'advanced':
+ '$input_advanced_config_file'
+ #else:
+ '${ options_type.input_config_file.fields.path }'
+ #end if
+ 'CCAT in Galaxy'
+ '$output_peak_file' '$output_region_file' '$output_top_file' '$output_log_file'
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ #if str( $options_type['options_type_selector' ] ) == 'advanced':
+fragmentSize ${options_type[ 'fragment_size' ]}
+slidingWinSize ${options_type[ 'sliding_window_size' ]}
+movingStep ${options_type[ 'moving_step' ]}
+isStrandSensitiveMode ${options_type[ 'is_strand_sensitive_mode' ]}
+minCount ${options_type[ 'min_count' ]}
+outputNum ${options_type[ 'output_num' ]}
+randomSeed ${options_type[ 'random_seed' ]}
+minScore ${options_type[ 'min_score' ]}
+bootstrapPass ${options_type[ 'bootstrap_pass' ]}
+#end if
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+**What it does**
+
+This tool allows ChIP-seq peak/region calling using CCAT.
+
+View the original CCAT documentation: http://cmb.gis.a-star.edu.sg/ChIPSeq/paperCCAT.htm.
+
+------
+
+**Citation**
+
+For the underlying tool, please cite `Xu H, Handoko L, Wei X, Ye C, Sheng J, Wei CL, Lin F, Sung WK. A signal-noise model for significance analysis of ChIP-seq with negative control. Bioinformatics. 2010 May 1;26(9):1199-204. <http://www.ncbi.nlm.nih.gov/pubmed/20371496>`_
+
+If you use this tool in Galaxy, please cite Blankenberg D, et al. *In preparation.*
+
+
+
diff -r 000000000000 -r a0c8dc671a23 test-data/1.interval
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/1.interval Mon Jan 27 09:27:03 2014 -0500
@@ -0,0 +1,5 @@
+chr1 4348187 4348589 3.70 4.90 2.55 0.24 0.46
+chr1 4488177 4488442 4.03 5.77 1.92 -0.67 0.81
+chr1 4774091 4774440 8.07 8.33 7.82 0.85 -0.40
+chr1 4800122 4800409 6.40 7.35 5.44 1.19 -0.42
+chr1 4878925 4879277 2.18 0.28 4.93 -0.96 1.24
diff -r 000000000000 -r a0c8dc671a23 test-data/1.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/1.txt Mon Jan 27 09:27:03 2014 -0500
@@ -0,0 +1,10 @@
+chr1 4225 19670
+chr10 6 8
+chr1 24417 24420
+chr6_hla_hap2 0 150
+chr2 1 5
+chr10 2 10
+chr1 30 55
+chrY 1 20
+chr1 1225979 42287290
+chr10 7 8
diff -r 000000000000 -r a0c8dc671a23 test-data/2.interval
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/2.interval Mon Jan 27 09:27:03 2014 -0500
@@ -0,0 +1,14 @@
+chrX 151117436 151117437 + 0.14351
+chrX 151117437 151117438 + 0.139843
+chrX 151117438 151117439 + 0.132509
+chrX 151117439 151117440 + 0.139843
+chrX 151117440 151117441 + 0.169179
+chrX 151117441 151117442 + 0.257185
+chrX 151117442 151117443 + 0.319523
+chrX 151117443 151117444 + 0.367193
+chrX 151117444 151117445 + 0.400195
+chrX 151117445 151117446 + 0.425864
+chrX 151117446 151117447 + 0.444198
+chrX 151117447 151117448 + 0.455199
+chrX 151117448 151117449 + 0.462533
+chrX 151117449 151117450 + 0.4662
diff -r 000000000000 -r a0c8dc671a23 test-data/2.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/2.txt Mon Jan 27 09:27:03 2014 -0500
@@ -0,0 +1,8 @@
+chr1 4225 19670
+chr10 6 8
+chr1 24417 24420
+chr6_hla_hap2 0 150
+chr2 1 5
+chr1 30 55
+chrY 1 20
+chr1 1225979 42287290
diff -r 000000000000 -r a0c8dc671a23 test-data/a.tab
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/a.tab Mon Jan 27 09:27:03 2014 -0500
@@ -0,0 +1,15 @@
+CHR SNP BP A1 TEST NMISS BETA STAT P
+1 rs1181876 3671541 T DOMDEV 958 -1.415 -3.326 0.0009161
+1 rs10492923 5092886 C ADD 1007 5.105 4.368 1.382e-05
+1 rs10492923 5092886 C DOMDEV 1007 -5.612 -4.249 2.35e-05
+1 rs10492923 5092886 C GENO_2DF 1007 NA 19.9 4.775e-05
+1 rs1801133 11778965 T ADD 1022 1.23 3.97 7.682e-05
+1 rs1801133 11778965 T GENO_2DF 1022 NA 16.07 0.0003233
+1 rs1361912 12663121 A ADD 1021 12.69 4.093 4.596e-05
+1 rs1361912 12663121 A DOMDEV 1021 -12.37 -3.945 8.533e-05
+1 rs1361912 12663121 A GENO_2DF 1021 NA 17.05 0.0001982
+1 rs1009806 19373138 G ADD 1021 -1.334 -3.756 0.0001826
+1 rs1009806 19373138 G GENO_2DF 1021 NA 19.36 6.244e-05
+1 rs873654 29550948 A DOMDEV 1012 1.526 3.6 0.0003339
+1 rs10489527 36800027 C ADD 1016 12.67 4.114 4.211e-05
+1 rs10489527 36800027 C DOMDEV 1016 -13.05 -4.02 6.249e-05
diff -r 000000000000 -r a0c8dc671a23 test-data/chipseq_enriched.bed.gz
Binary file test-data/chipseq_enriched.bed.gz has changed
diff -r 000000000000 -r a0c8dc671a23 test-data/chipseq_input.bed.gz
Binary file test-data/chipseq_input.bed.gz has changed
diff -r 000000000000 -r a0c8dc671a23 test-data/peakcalling_ccat/3.0/ccat_test_log_out_1.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/peakcalling_ccat/3.0/ccat_test_log_out_1.txt Mon Jan 27 09:27:03 2014 -0500
@@ -0,0 +1,131 @@
+chromosome length information read. chromNum = 49!
+config file read.
+fragmentSize = 200
+isStrandSensitiveMode = 0
+slidingWinSize = 500
+movingStep = 50
+outputNum = 100000
+minCount = 4
+minScore = 5.000000
+bootstrapPass = 50
+randSeed = 123456
+reading tag files......
+10000 tags in L1, 10000 tags in L2.
+tag file read.
+pre-processing......
+pre-processing finished.
+estimating noise rate......
+not enough reads for noise rate estimation.
+noise rate estimation failed. noise rate set to be 1.0
+noise rate = 1.000000
+peak-finding......
+chr1......884 candidate peaks.
+chr1_random......0 candidate peaks.
+chr10......0 candidate peaks.
+chr10_random......0 candidate peaks.
+chr11......0 candidate peaks.
+chr11_random......0 candidate peaks.
+chr12......0 candidate peaks.
+chr13......0 candidate peaks.
+chr13_random......0 candidate peaks.
+chr14......0 candidate peaks.
+chr15......0 candidate peaks.
+chr15_random......0 candidate peaks.
+chr16......0 candidate peaks.
+chr16_random......0 candidate peaks.
+chr17......0 candidate peaks.
+chr17_random......0 candidate peaks.
+chr18......0 candidate peaks.
+chr18_random......0 candidate peaks.
+chr19......0 candidate peaks.
+chr19_random......0 candidate peaks.
+chr2......0 candidate peaks.
+chr2_random......0 candidate peaks.
+chr20......0 candidate peaks.
+chr21......0 candidate peaks.
+chr21_random......0 candidate peaks.
+chr22......0 candidate peaks.
+chr22_random......0 candidate peaks.
+chr22_h2_hap1......0 candidate peaks.
+chr3......0 candidate peaks.
+chr3_random......0 candidate peaks.
+chr4......0 candidate peaks.
+chr4_random......0 candidate peaks.
+chr5......0 candidate peaks.
+chr5_random......0 candidate peaks.
+chr5_h2_hap1......0 candidate peaks.
+chr6......0 candidate peaks.
+chr6_random......0 candidate peaks.
+chr6_cox_hap1......0 candidate peaks.
+chr6_qbl_hap2......0 candidate peaks.
+chr7......0 candidate peaks.
+chr7_random......0 candidate peaks.
+chr8......0 candidate peaks.
+chr8_random......0 candidate peaks.
+chr9......0 candidate peaks.
+chr9_random......0 candidate peaks.
+chrM......0 candidate peaks.
+chrX......0 candidate peaks.
+chrX_random......0 candidate peaks.
+chrY......0 candidate peaks.
+peak-finding finished.
+Significance Analysis......
+estimating paramters......
+smoothing factor = 0.356298
+estimating local FDR.....
+FDR at the threshold 5.000000 is 0.999000. You may want to adjust the threshold by inspecting the output files.
+post-processing......
+chr1......finished.
+chr1_random......finished.
+chr10......finished.
+chr10_random......finished.
+chr11......finished.
+chr11_random......finished.
+chr12......finished.
+chr13......finished.
+chr13_random......finished.
+chr14......finished.
+chr15......finished.
+chr15_random......finished.
+chr16......finished.
+chr16_random......finished.
+chr17......finished.
+chr17_random......finished.
+chr18......finished.
+chr18_random......finished.
+chr19......finished.
+chr19_random......finished.
+chr2......finished.
+chr2_random......finished.
+chr20......finished.
+chr21......finished.
+chr21_random......finished.
+chr22......finished.
+chr22_random......finished.
+chr22_h2_hap1......finished.
+chr3......finished.
+chr3_random......finished.
+chr4......finished.
+chr4_random......finished.
+chr5......finished.
+chr5_random......finished.
+chr5_h2_hap1......finished.
+chr6......finished.
+chr6_random......finished.
+chr6_cox_hap1......finished.
+chr6_qbl_hap2......finished.
+chr7......finished.
+chr7_random......finished.
+chr8......finished.
+chr8_random......finished.
+chr9......finished.
+chr9_random......finished.
+chrM......finished.
+chrX......finished.
+chrX_random......finished.
+chrY......finished.
+post-processing finished.
+Significance analysis finished.
+saving results.......
+results saved.
+CCAT process completed!
diff -r 000000000000 -r a0c8dc671a23 test-data/peakcalling_ccat/3.0/ccat_test_log_out_2.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/peakcalling_ccat/3.0/ccat_test_log_out_2.txt Mon Jan 27 09:27:03 2014 -0500
@@ -0,0 +1,131 @@
+chromosome length information read. chromNum = 49!
+config file read.
+fragmentSize = 200
+isStrandSensitiveMode = 0
+slidingWinSize = 1000
+movingStep = 50
+outputNum = 100000
+minCount = 4
+minScore = 5.000000
+bootstrapPass = 50
+randSeed = 123456
+reading tag files......
+10000 tags in L1, 10000 tags in L2.
+tag file read.
+pre-processing......
+pre-processing finished.
+estimating noise rate......
+not enough reads for noise rate estimation.
+noise rate estimation failed. noise rate set to be 1.0
+noise rate = 1.000000
+peak-finding......
+chr1......673 candidate peaks.
+chr1_random......0 candidate peaks.
+chr10......0 candidate peaks.
+chr10_random......0 candidate peaks.
+chr11......0 candidate peaks.
+chr11_random......0 candidate peaks.
+chr12......0 candidate peaks.
+chr13......0 candidate peaks.
+chr13_random......0 candidate peaks.
+chr14......0 candidate peaks.
+chr15......0 candidate peaks.
+chr15_random......0 candidate peaks.
+chr16......0 candidate peaks.
+chr16_random......0 candidate peaks.
+chr17......0 candidate peaks.
+chr17_random......0 candidate peaks.
+chr18......0 candidate peaks.
+chr18_random......0 candidate peaks.
+chr19......0 candidate peaks.
+chr19_random......0 candidate peaks.
+chr2......0 candidate peaks.
+chr2_random......0 candidate peaks.
+chr20......0 candidate peaks.
+chr21......0 candidate peaks.
+chr21_random......0 candidate peaks.
+chr22......0 candidate peaks.
+chr22_random......0 candidate peaks.
+chr22_h2_hap1......0 candidate peaks.
+chr3......0 candidate peaks.
+chr3_random......0 candidate peaks.
+chr4......0 candidate peaks.
+chr4_random......0 candidate peaks.
+chr5......0 candidate peaks.
+chr5_random......0 candidate peaks.
+chr5_h2_hap1......0 candidate peaks.
+chr6......0 candidate peaks.
+chr6_random......0 candidate peaks.
+chr6_cox_hap1......0 candidate peaks.
+chr6_qbl_hap2......0 candidate peaks.
+chr7......0 candidate peaks.
+chr7_random......0 candidate peaks.
+chr8......0 candidate peaks.
+chr8_random......0 candidate peaks.
+chr9......0 candidate peaks.
+chr9_random......0 candidate peaks.
+chrM......0 candidate peaks.
+chrX......0 candidate peaks.
+chrX_random......0 candidate peaks.
+chrY......0 candidate peaks.
+peak-finding finished.
+Significance Analysis......
+estimating paramters......
+smoothing factor = 0.287387
+estimating local FDR.....
+FDR at the threshold 5.000000 is 0.999000. You may want to adjust the threshold by inspecting the output files.
+post-processing......
+chr1......finished.
+chr1_random......finished.
+chr10......finished.
+chr10_random......finished.
+chr11......finished.
+chr11_random......finished.
+chr12......finished.
+chr13......finished.
+chr13_random......finished.
+chr14......finished.
+chr15......finished.
+chr15_random......finished.
+chr16......finished.
+chr16_random......finished.
+chr17......finished.
+chr17_random......finished.
+chr18......finished.
+chr18_random......finished.
+chr19......finished.
+chr19_random......finished.
+chr2......finished.
+chr2_random......finished.
+chr20......finished.
+chr21......finished.
+chr21_random......finished.
+chr22......finished.
+chr22_random......finished.
+chr22_h2_hap1......finished.
+chr3......finished.
+chr3_random......finished.
+chr4......finished.
+chr4_random......finished.
+chr5......finished.
+chr5_random......finished.
+chr5_h2_hap1......finished.
+chr6......finished.
+chr6_random......finished.
+chr6_cox_hap1......finished.
+chr6_qbl_hap2......finished.
+chr7......finished.
+chr7_random......finished.
+chr8......finished.
+chr8_random......finished.
+chr9......finished.
+chr9_random......finished.
+chrM......finished.
+chrX......finished.
+chrX_random......finished.
+chrY......finished.
+post-processing finished.
+Significance analysis finished.
+saving results.......
+results saved.
+CCAT process completed!
diff -r 000000000000 -r a0c8dc671a23 test-data/peakcalling_ccat/3.0/ccat_test_peak_out_1.interval.re_match
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/peakcalling_ccat/3.0/ccat_test_peak_out_1.interval.re_match Mon Jan 27 09:27:03 2014 -0500
@@ -0,0 +1,382 @@
+chr1 4760025 4756750 4762650 128 0 399\.\d+ 0\.133000
+chr1 4761475 4756750 4762650 74 0 230\.\d+ 0\.133000
+chr1 4771725 4768050 4778800 37 0 115\.\d+ 0\.133000
+chr1 5061925 5060800 5063500 15 0 46\.\d+ 0\.133000
+chr1 5174925 5172300 5175650 15 0 46\.\d+ 0\.133000
+chr1 5198225 5193500 5203550 13 0 40\.\d+ 0\.133000
+chr1 5094525 5090900 5098600 12 0 37\.\d+ 0\.133000
+chr1 5649775 5646050 5655200 12 0 37\.\d+ 0\.133000
+chr1 4764325 4763100 4767650 11 0 34\.\d+ 0\.189000
+chr1 5250175 5247500 5252250 11 0 34\.\d+ 0\.189000
+chr1 4861125 4856150 4863100 11 0 34\.\d+ 0\.189000
+chr1 5202075 5193500 5203550 11 0 34\.\d+ 0\.189000
+chr1 4961625 4952100 4964300 11 0 34\.\d+ 0\.189000
+chr1 4830175 4828350 4831300 11 0 34\.\d+ 0\.189000
+chr1 5177075 5175750 5180950 11 0 34\.\d+ 0\.189000
+chr1 4849575 4842300 4852000 10 0 31\.\d+ 0\.189000
+chr1 4792275 4789000 4793650 10 0 31\.\d+ 0\.189000
+chr1 4996125 4991700 4999350 10 0 31\.\d+ 0\.189000
+chr1 5132325 5128000 5136550 10 0 31\.\d+ 0\.189000
+chr1 5270525 5269800 5276000 10 0 31\.\d+ 0\.189000
+chr1 4716525 4708050 4718500 10 0 31\.\d+ 0\.189000
+chr1 4766575 4763100 4767650 10 0 31\.\d+ 0\.189000
+chr1 4740375 4733200 4746750 10 0 31\.\d+ 0\.189000
+chr1 5594075 5591050 5602000 10 0 31\.\d+ 0\.189000
+chr1 4908575 4907850 4911250 10 0 31\.\d+ 0\.189000
+chr1 4806875 4800850 4808250 9 0 28\.\d+ 0\.189000
+chr1 5078275 5075400 5080200 9 0 28\.\d+ 0\.189000
+chr1 5221425 5215900 5227150 9 0 28\.\d+ 0\.189000
+chr1 5616925 5614250 5618100 9 0 28\.\d+ 0\.189000
+chr1 4811775 4809250 4818000 9 0 28\.\d+ 0\.189000
+chr1 5224375 5215900 5227150 9 0 28\.\d+ 0\.189000
+chr1 4712925 4708050 4718500 9 0 28\.\d+ 0\.189000
+chr1 4820775 4819250 4824400 9 0 28\.\d+ 0\.189000
+chr1 5510975 5510050 5511700 9 0 28\.\d+ 0\.189000
+chr1 4757975 4756750 4762650 9 0 28\.\d+ 0\.189000
+chr1 4902125 4896550 4904200 9 0 28\.\d+ 0\.189000
+chr1 4754525 4746800 4756450 9 0 28\.\d+ 0\.189000
+chr1 4752925 4746800 4756450 9 0 28\.\d+ 0\.189000
+chr1 4663075 4662250 4664800 9 0 28\.\d+ 0\.189000
+chr1 4747475 4746800 4756450 9 0 28\.\d+ 0\.189000
+chr1 5726225 5725050 5728250 9 0 28\.\d+ 0\.189000
+chr1 4666125 4665400 4667400 9 0 28\.\d+ 0\.189000
+chr1 5311275 5309550 5312000 9 0 28\.\d+ 0\.189000
+chr1 5653625 5646050 5655200 9 0 28\.\d+ 0\.189000
+chr1 5267625 5265900 5268400 9 0 28\.\d+ 0\.189000
+chr1 5648725 5646050 5655200 9 0 28\.\d+ 0\.189000
+chr1 4732075 4728950 4732850 9 0 28\.\d+ 0\.189000
+chr1 4955725 4952100 4964300 9 0 28\.\d+ 0\.189000
+chr1 4892675 4889250 4896100 9 0 28\.\d+ 0\.189000
+chr1 4891925 4889250 4896100 9 0 28\.\d+ 0\.189000
+chr1 5306625 5303150 5309300 9 0 28\.\d+ 0\.189000
+chr1 4337575 4337150 4338250 54 2 25\.\d+ 0\.193000
+chr1 5208725 5206650 5210650 8 0 24\.\d+ 0\.193000
+chr1 5217175 5215900 5227150 8 0 24\.\d+ 0\.193000
+chr1 5305275 5303150 5309300 8 0 24\.\d+ 0\.193000
+chr1 5429675 5427700 5430400 8 0 24\.\d+ 0\.193000
+chr1 4714325 4708050 4718500 8 0 24\.\d+ 0\.193000
+chr1 4743875 4733200 4746750 8 0 24\.\d+ 0\.193000
+chr1 5412375 5411500 5413450 8 0 24\.\d+ 0\.193000
+chr1 4882725 4879050 4885000 8 0 24\.\d+ 0\.193000
+chr1 4927275 4924450 4935350 8 0 24\.\d+ 0\.193000
+chr1 4844075 4842300 4852000 8 0 24\.\d+ 0\.193000
+chr1 4915625 4913050 4924250 8 0 24\.\d+ 0\.193000
+chr1 4918175 4913050 4924250 8 0 24\.\d+ 0\.193000
+chr1 4691975 4687200 4694150 8 0 24\.\d+ 0\.193000
+chr1 4967025 4965550 4970250 8 0 24\.\d+ 0\.193000
+chr1 4960075 4952100 4964300 8 0 24\.\d+ 0\.193000
+chr1 4957475 4952100 4964300 8 0 24\.\d+ 0\.193000
+chr1 4928675 4924450 4935350 8 0 24\.\d+ 0\.193000
+chr1 4934125 4924450 4935350 8 0 24\.\d+ 0\.193000
+chr1 4936125 4935500 4937950 8 0 24\.\d+ 0\.193000
+chr1 5122725 5122100 5123350 8 0 24\.\d+ 0\.193000
+chr1 5129925 5128000 5136550 8 0 24\.\d+ 0\.193000
+chr1 4833925 4831400 4840050 8 0 24\.\d+ 0\.193000
+chr1 5114275 5113600 5116850 8 0 24\.\d+ 0\.193000
+chr1 5045775 5044700 5048150 8 0 24\.\d+ 0\.193000
+chr1 4809925 4809250 4818000 8 0 24\.\d+ 0\.193000
+chr1 5055525 5053900 5058050 8 0 24\.\d+ 0\.193000
+chr1 4944975 4944400 4947700 7 0 21\.\d+ 0\.193000
+chr1 4893575 4889250 4896100 7 0 21\.\d+ 0\.193000
+chr1 5314975 5312250 5316300 7 0 21\.\d+ 0\.193000
+chr1 4899675 4896550 4904200 7 0 21\.\d+ 0\.193000
+chr1 4905925 4905100 4907750 7 0 21\.\d+ 0\.193000
+chr1 4917125 4913050 4924250 7 0 21\.\d+ 0\.193000
+chr1 5365125 5363650 5365850 7 0 21\.\d+ 0\.193000
+chr1 4890875 4889250 4896100 7 0 21\.\d+ 0\.193000
+chr1 4765275 4763100 4767650 7 0 21\.\d+ 0\.193000
+chr1 4880925 4879050 4885000 7 0 21\.\d+ 0\.193000
+chr1 4874225 4871650 4875600 7 0 21\.\d+ 0\.193000
+chr1 5212225 5210850 5215150 7 0 21\.\d+ 0\.193000
+chr1 4801975 4800850 4808250 7 0 21\.\d+ 0\.193000
+chr1 5017525 5015500 5020500 7 0 21\.\d+ 0\.193000
+chr1 5018825 5015500 5020500 7 0 21\.\d+ 0\.193000
+chr1 5178875 5175750 5180950 7 0 21\.\d+ 0\.193000
+chr1 4804975 4800850 4808250 7 0 21\.\d+ 0\.193000
+chr1 5059325 5058600 5060000 7 0 21\.\d+ 0\.193000
+chr1 4835275 4831400 4840050 7 0 21\.\d+ 0\.193000
+chr1 5223575 5215900 5227150 7 0 21\.\d+ 0\.193000
+chr1 4998775 4991700 4999350 7 0 21\.\d+ 0\.193000
+chr1 4775325 4768050 4778800 7 0 21\.\d+ 0\.193000
+chr1 4872275 4871650 4875600 7 0 21\.\d+ 0\.193000
+chr1 4963075 4952100 4964300 7 0 21\.\d+ 0\.193000
+chr1 5004175 5001700 5010700 7 0 21\.\d+ 0\.193000
+chr1 4794975 4794200 4797900 7 0 21\.\d+ 0\.193000
+chr1 4789675 4789000 4793650 7 0 21\.\d+ 0\.193000
+chr1 5229975 5229250 5231850 7 0 21\.\d+ 0\.193000
+chr1 4734375 4733200 4746750 7 0 21\.\d+ 0\.193000
+chr1 5448175 5447500 5449550 7 0 21\.\d+ 0\.193000
+chr1 4736675 4733200 4746750 7 0 21\.\d+ 0\.193000
+chr1 4696225 4694250 4697100 7 0 21\.\d+ 0\.193000
+chr1 5679225 5678650 5681350 7 0 21\.\d+ 0\.193000
+chr1 4688525 4687200 4694150 7 0 21\.\d+ 0\.193000
+chr1 5570575 5569100 5573050 7 0 21\.\d+ 0\.193000
+chr1 5651925 5646050 5655200 7 0 21\.\d+ 0\.193000
+chr1 5568475 5567950 5569000 7 0 21\.\d+ 0\.193000
+chr1 5400875 5399200 5403500 7 0 21\.\d+ 0\.193000
+chr1 4744975 4733200 4746750 7 0 21\.\d+ 0\.193000
+chr1 5386625 5385650 5387700 7 0 21\.\d+ 0\.193000
+chr1 4749875 4746800 4756450 7 0 21\.\d+ 0\.193000
+chr1 5384325 5383800 5385000 7 0 21\.\d+ 0\.193000
+chr1 4508175 4507350 4508650 41 2 19\.\d+ 0\.193000
+chr1 5612875 5610500 5613650 6 0 18\.\d+ 0\.193000
+chr1 5006175 5001700 5010700 6 0 18\.\d+ 0\.193000
+chr1 4718025 4708050 4718500 6 0 18\.\d+ 0\.193000
+chr1 4678925 4678250 4679650 6 0 18\.\d+ 0\.193000
+chr1 5203125 5193500 5203550 6 0 18\.\d+ 0\.193000
+chr1 5533875 5531900 5534450 6 0 18\.\d+ 0\.193000
+chr1 5532625 5531900 5534450 6 0 18\.\d+ 0\.193000
+chr1 4670175 4668300 4670850 6 0 18\.\d+ 0\.193000
+chr1 4954225 4952100 4964300 6 0 18\.\d+ 0\.193000
+chr1 5220175 5215900 5227150 6 0 18\.\d+ 0\.193000
+chr1 5106325 5105550 5109300 6 0 18\.\d+ 0\.193000
+chr1 5512575 5511900 5513200 6 0 18\.\d+ 0\.193000
+chr1 5011925 5010800 5015150 6 0 18\.\d+ 0\.193000
+chr1 4845975 4842300 4852000 6 0 18\.\d+ 0\.193000
+chr1 4799975 4799000 4800750 6 0 18\.\d+ 0\.193000
+chr1 5581475 5575800 5590800 6 0 18\.\d+ 0\.193000
+chr1 5014425 5010800 5015150 6 0 18\.\d+ 0\.193000
+chr1 5614875 5614250 5618100 6 0 18\.\d+ 0\.193000
+chr1 4858375 4856150 4863100 6 0 18\.\d+ 0\.193000
+chr1 5134825 5128000 5136550 6 0 18\.\d+ 0\.193000
+chr1 5577775 5575800 5590800 6 0 18\.\d+ 0\.193000
+chr1 4968175 4965550 4970250 6 0 18\.\d+ 0\.193000
+chr1 5151525 5150800 5156200 6 0 18\.\d+ 0\.193000
+chr1 5751675 5751000 5752900 6 0 18\.\d+ 0\.193000
+chr1 5571625 5569100 5573050 6 0 18\.\d+ 0\.193000
+chr1 4981675 4979400 4983450 6 0 18\.\d+ 0\.193000
+chr1 4813825 4809250 4818000 6 0 18\.\d+ 0\.193000
+chr1 5125975 5124950 5127600 6 0 18\.\d+ 0\.193000
+chr1 5549025 5548350 5551750 6 0 18\.\d+ 0\.193000
+chr1 4865525 4864400 4866300 6 0 18\.\d+ 0\.193000
+chr1 5196775 5193500 5203550 6 0 18\.\d+ 0\.193000
+chr1 5646825 5646050 5655200 6 0 18\.\d+ 0\.193000
+chr1 5167125 5165800 5169800 6 0 18\.\d+ 0\.193000
+chr1 5024625 5020800 5026100 6 0 18\.\d+ 0\.193000
+chr1 4751325 4746800 4756450 6 0 18\.\d+ 0\.193000
+chr1 5168375 5165800 5169800 6 0 18\.\d+ 0\.193000
+chr1 5225975 5215900 5227150 6 0 18\.\d+ 0\.193000
+chr1 5295475 5294850 5299450 6 0 18\.\d+ 0\.193000
+chr1 4910325 4907850 4911250 6 0 18\.\d+ 0\.193000
+chr1 5718675 5716950 5719450 6 0 18\.\d+ 0\.193000
+chr1 5065525 5063900 5068050 6 0 18\.\d+ 0\.193000
+chr1 5745875 5743300 5747400 6 0 18\.\d+ 0\.193000
+chr1 5279825 5279200 5281050 6 0 18\.\d+ 0\.193000
+chr1 5277575 5276150 5279150 6 0 18\.\d+ 0\.193000
+chr1 5590125 5575800 5590800 6 0 18\.\d+ 0\.193000
+chr1 5285775 5285150 5287400 6 0 18\.\d+ 0\.193000
+chr1 5409525 5407000 5411350 6 0 18\.\d+ 0\.193000
+chr1 5057325 5053900 5058050 6 0 18\.\d+ 0\.193000
+chr1 5324825 5323050 5329500 6 0 18\.\d+ 0\.193000
+chr1 4738225 4733200 4746750 6 0 18\.\d+ 0\.193000
+chr1 4769325 4768050 4778800 6 0 18\.\d+ 0\.193000
+chr1 5596625 5591050 5602000 6 0 18\.\d+ 0\.193000
+chr1 5442275 5441650 5444200 6 0 18\.\d+ 0\.193000
+chr1 3218225 3217950 3218650 6 0 18\.\d+ 0\.193000
+chr1 5348875 5348250 5349450 6 0 18\.\d+ 0\.193000
+chr1 5075925 5075400 5080200 6 0 18\.\d+ 0\.193000
+chr1 4776975 4768050 4778800 6 0 18\.\d+ 0\.193000
+chr1 5240125 5239500 5241650 6 0 18\.\d+ 0\.193000
+chr1 4693475 4687200 4694150 6 0 18\.\d+ 0\.193000
+chr1 5088175 5082600 5090800 6 0 18\.\d+ 0\.193000
+chr1 4697725 4697150 4699850 6 0 18\.\d+ 0\.193000
+chr1 4790975 4789000 4793650 6 0 18\.\d+ 0\.193000
+chr1 4689325 4687200 4694150 6 0 18\.\d+ 0\.193000
+chr1 4787025 4786400 4787800 6 0 18\.\d+ 0\.193000
+chr1 5586075 5575800 5590800 6 0 18\.\d+ 0\.193000
+chr1 5706275 5704550 5709600 6 0 18\.\d+ 0\.193000
+chr1 5265025 5264250 5265800 6 0 18\.\d+ 0\.193000
+chr1 5077225 5075400 5080200 6 0 18\.\d+ 0\.193000
+chr1 5453725 5451600 5457500 6 0 18\.\d+ 0\.193000
+chr1 5697075 5696100 5697750 6 0 18\.\d+ 0\.193000
+chr1 5588975 5575800 5590800 6 0 18\.\d+ 0\.193000
+chr1 4926425 4924450 4935350 6 0 18\.\d+ 0\.193000
+chr1 5256375 5255600 5256950 6 0 18\.\d+ 0\.193000
+chr1 4921425 4913050 4924250 6 0 18\.\d+ 0\.193000
+chr1 4408225 4407650 4408750 81 5 16\.\d+ 0\.193000
+chr1 5714575 5714000 5716900 5 0 15\.\d+ 0\.193000
+chr1 4925175 4924450 4935350 5 0 15\.\d+ 0\.193000
+chr1 5716125 5714000 5716900 5 0 15\.\d+ 0\.193000
+chr1 4885925 4885150 4886550 5 0 15\.\d+ 0\.193000
+chr1 4931325 4924450 4935350 5 0 15\.\d+ 0\.193000
+chr1 3832625 3831950 3833100 5 0 15\.\d+ 0\.193000
+chr1 5680325 5678650 5681350 5 0 15\.\d+ 0\.193000
+chr1 5606575 5604350 5609750 5 0 15\.\d+ 0\.193000
+chr1 4668925 4668300 4670850 5 0 15\.\d+ 0\.193000
+chr1 4894525 4889250 4896100 5 0 15\.\d+ 0\.193000
+chr1 5022225 5020800 5026100 5 0 15\.\d+ 0\.193000
+chr1 4843075 4842300 4852000 5 0 15\.\d+ 0\.193000
+chr1 5746675 5743300 5747400 5 0 15\.\d+ 0\.193000
+chr1 5023175 5020800 5026100 5 0 15\.\d+ 0\.193000
+chr1 5727525 5725050 5728250 5 0 15\.\d+ 0\.193000
+chr1 3054875 3054500 3055300 5 0 15\.\d+ 0\.193000
+chr1 5019775 5015500 5020500 5 0 15\.\d+ 0\.193000
+chr1 4897525 4896550 4904200 5 0 15\.\d+ 0\.193000
+chr1 5742225 5741500 5743250 5 0 15\.\d+ 0\.193000
+chr1 4932625 4924450 4935350 5 0 15\.\d+ 0\.193000
+chr1 4687675 4687200 4694150 5 0 15\.\d+ 0\.193000
+chr1 4997775 4991700 4999350 5 0 15\.\d+ 0\.193000
+chr1 4855025 4854250 4856100 5 0 15\.\d+ 0\.193000
+chr1 5633525 5631850 5636000 5 0 15\.\d+ 0\.193000
+chr1 5621725 5621000 5622450 5 0 15\.\d+ 0\.193000
+chr1 4857375 4856150 4863100 5 0 15\.\d+ 0\.193000
+chr1 4993025 4991700 4999350 5 0 15\.\d+ 0\.193000
+chr1 4994875 4991700 4999350 5 0 15\.\d+ 0\.193000
+chr1 4979975 4979400 4983450 5 0 15\.\d+ 0\.193000
+chr1 4681775 4679750 4684100 5 0 15\.\d+ 0\.193000
+chr1 4674175 4673500 4675550 5 0 15\.\d+ 0\.193000
+chr1 5013425 5010800 5015150 5 0 15\.\d+ 0\.193000
+chr1 5666675 5666250 5667300 5 0 15\.\d+ 0\.193000
+chr1 4092425 4091800 4092950 5 0 15\.\d+ 0\.193000
+chr1 4879825 4879050 4885000 5 0 15\.\d+ 0\.193000
+chr1 5655975 5655300 5656700 5 0 15\.\d+ 0\.193000
+chr1 3139075 3138350 3139350 5 0 15\.\d+ 0\.193000
+chr1 4947075 4944400 4947700 5 0 15\.\d+ 0\.193000
+chr1 4952725 4952100 4964300 5 0 15\.\d+ 0\.193000
+chr1 5497825 5495700 5499250 5 0 15\.\d+ 0\.193000
+chr1 4730925 4728950 4732850 5 0 15\.\d+ 0\.193000
+chr1 4727375 4725950 4728150 5 0 15\.\d+ 0\.193000
+chr1 5506125 5501700 5509950 5 0 15\.\d+ 0\.193000
+chr1 5251175 5247500 5252250 5 0 15\.\d+ 0\.193000
+chr1 5253325 5252750 5255300 5 0 15\.\d+ 0\.193000
+chr1 5487775 5487100 5488500 5 0 15\.\d+ 0\.193000
+chr1 5475625 5475100 5477300 5 0 15\.\d+ 0\.193000
+chr1 5540175 5539550 5541750 5 0 15\.\d+ 0\.193000
+chr1 5201025 5193500 5203550 5 0 15\.\d+ 0\.193000
+chr1 5194175 5193500 5203550 5 0 15\.\d+ 0\.193000
+chr1 5195025 5193500 5203550 5 0 15\.\d+ 0\.193000
+chr1 5214375 5210850 5215150 5 0 15\.\d+ 0\.193000
+chr1 5514725 5514000 5516700 5 0 15\.\d+ 0\.193000
+chr1 5207425 5206650 5210650 5 0 15\.\d+ 0\.193000
+chr1 5213475 5210850 5215150 5 0 15\.\d+ 0\.193000
+chr1 5254725 5252750 5255300 5 0 15\.\d+ 0\.193000
+chr1 4735825 4733200 4746750 5 0 15\.\d+ 0\.193000
+chr1 5313175 5312250 5316300 5 0 15\.\d+ 0\.193000
+chr1 5308675 5303150 5309300 5 0 15\.\d+ 0\.193000
+chr1 5310025 5309550 5312000 5 0 15\.\d+ 0\.193000
+chr1 4755875 4746800 4756450 5 0 15\.\d+ 0\.193000
+chr1 5370725 5369000 5375550 5 0 15\.\d+ 0\.193000
+chr1 4768525 4768050 4778800 5 0 15\.\d+ 0\.193000
+chr1 5356225 5353400 5357000 5 0 15\.\d+ 0\.193000
+chr1 5273575 5269800 5276000 5 0 15\.\d+ 0\.193000
+chr1 5275375 5269800 5276000 5 0 15\.\d+ 0\.193000
+chr1 4773725 4768050 4778800 5 0 15\.\d+ 0\.193000
+chr1 5456175 5451600 5457500 5 0 15\.\d+ 0\.193000
+chr1 5297375 5294850 5299450 5 0 15\.\d+ 0\.193000
+chr1 5303725 5303150 5309300 5 0 15\.\d+ 0\.193000
+chr1 5288675 5288100 5291550 5 0 15\.\d+ 0\.193000
+chr1 5292275 5291650 5293450 5 0 15\.\d+ 0\.193000
+chr1 4699075 4697150 4699850 5 0 15\.\d+ 0\.193000
+chr1 5119075 5118350 5121050 5 0 15\.\d+ 0\.193000
+chr1 5112175 5109600 5112950 5 0 15\.\d+ 0\.193000
+chr1 4822725 4819250 4824400 5 0 15\.\d+ 0\.193000
+chr1 5576875 5575800 5590800 5 0 15\.\d+ 0\.193000
+chr1 5579775 5575800 5590800 5 0 15\.\d+ 0\.193000
+chr1 5128575 5128000 5136550 5 0 15\.\d+ 0\.193000
+chr1 5110675 5109600 5112950 5 0 15\.\d+ 0\.193000
+chr1 5600275 5591050 5602000 5 0 15\.\d+ 0\.193000
+chr1 5047475 5044700 5048150 5 0 15\.\d+ 0\.193000
+chr1 4694975 4694250 4697100 5 0 15\.\d+ 0\.193000
+chr1 4839525 4831400 4840050 5 0 15\.\d+ 0\.193000
+chr1 5097975 5090900 5098600 5 0 15\.\d+ 0\.193000
+chr1 5092875 5090900 5098600 5 0 15\.\d+ 0\.193000
+chr1 5086475 5082600 5090800 5 0 15\.\d+ 0\.193000
+chr1 4816925 4809250 4818000 5 0 15\.\d+ 0\.193000
+chr1 5154075 5150800 5156200 5 0 15\.\d+ 0\.193000
+chr1 5155225 5150800 5156200 5 0 15\.\d+ 0\.193000
+chr1 5142775 5141600 5144200 5 0 15\.\d+ 0\.193000
+chr1 5148625 5148200 5150600 5 0 15\.\d+ 0\.193000
+chr1 5569825 5569100 5573050 5 0 15\.\d+ 0\.193000
+chr1 4710975 4708050 4718500 5 0 15\.\d+ 0\.193000
+chr1 4709675 4708050 4718500 5 0 15\.\d+ 0\.193000
+chr1 5164475 5163800 5165200 5 0 15\.\d+ 0\.193000
+chr1 4815475 4809250 4818000 5 0 15\.\d+ 0\.193000
+chr1 5137425 5136800 5138000 5 0 15\.\d+ 0\.193000
+chr1 4832075 4831400 4840050 4 0 12\.\d+ 0\.193000
+chr1 4887025 4886600 4887750 4 0 12\.\d+ 0\.193000
+chr1 4729725 4728950 4732850 4 0 12\.\d+ 0\.193000
+chr1 4784375 4783850 4785000 4 0 12\.\d+ 0\.193000
+chr1 4856725 4856150 4863100 4 0 12\.\d+ 0\.193000
+chr1 4841375 4840600 4842150 4 0 12\.\d+ 0\.193000
+chr1 4781125 4780750 4781850 4 0 12\.\d+ 0\.193000
+chr1 4847075 4842300 4852000 4 0 12\.\d+ 0\.193000
+chr1 4823725 4819250 4824400 4 0 12\.\d+ 0\.193000
+chr1 4796325 4794200 4797900 4 0 12\.\d+ 0\.193000
+chr1 4877275 4876500 4878000 4 0 12\.\d+ 0\.193000
+chr1 4828975 4828350 4831300 4 0 12\.\d+ 0\.193000
+chr1 4680375 4679750 4684100 4 0 12\.\d+ 0\.193000
+chr1 4726475 4725950 4728150 4 0 12\.\d+ 0\.193000
+chr1 4852675 4852100 4853850 4 0 12\.\d+ 0\.193000
+chr1 5372275 5369000 5375550 4 0 12\.\d+ 0\.193000
+chr1 5373925 5369000 5375550 4 0 12\.\d+ 0\.193000
+chr1 5374875 5369000 5375550 4 0 12\.\d+ 0\.193000
+chr1 5354075 5353400 5357000 4 0 12\.\d+ 0\.193000
+chr1 5364075 5363650 5365850 4 0 12\.\d+ 0\.193000
+chr1 5369775 5369000 5375550 4 0 12\.\d+ 0\.193000
+chr1 5396675 5396050 5398750 4 0 12\.\d+ 0\.193000
+chr1 5407575 5407000 5411350 4 0 12\.\d+ 0\.193000
+chr1 5431675 5430850 5433300 4 0 12\.\d+ 0\.193000
+chr1 5381625 5381000 5383200 4 0 12\.\d+ 0\.193000
+chr1 5382825 5381000 5383200 4 0 12\.\d+ 0\.193000
+chr1 5395225 5394650 5396000 4 0 12\.\d+ 0\.193000
+chr1 5234475 5233800 5237550 4 0 12\.\d+ 0\.193000
+chr1 5235825 5233800 5237550 4 0 12\.\d+ 0\.193000
+chr1 5241075 5239500 5241650 4 0 12\.\d+ 0\.193000
+chr1 5218925 5215900 5227150 4 0 12\.\d+ 0\.193000
+chr1 5231075 5229250 5231850 4 0 12\.\d+ 0\.193000
+chr1 5232925 5232400 5233500 4 0 12\.\d+ 0\.193000
+chr1 5317175 5316400 5318750 4 0 12\.\d+ 0\.193000
+chr1 5323675 5323050 5329500 4 0 12\.\d+ 0\.193000
+chr1 5327625 5323050 5329500 4 0 12\.\d+ 0\.193000
+chr1 5249175 5247500 5252250 4 0 12\.\d+ 0\.193000
+chr1 5257475 5257000 5258200 4 0 12\.\d+ 0\.193000
+chr1 5290925 5288100 5291550 4 0 12\.\d+ 0\.193000
+chr1 3196025 3195750 3196350 4 0 12\.\d+ 0\.193000
+chr1 5632475 5631850 5636000 4 0 12\.\d+ 0\.193000
+chr1 5657525 5657150 5658300 4 0 12\.\d+ 0\.193000
+chr1 5599225 5591050 5602000 4 0 12\.\d+ 0\.193000
+chr1 5603725 5602100 5604250 4 0 12\.\d+ 0\.193000
+chr1 5611875 5610500 5613650 4 0 12\.\d+ 0\.193000
+chr1 5712725 5712200 5713300 4 0 12\.\d+ 0\.193000
+chr1 3062525 3062250 3062900 4 0 12\.\d+ 0\.193000
+chr1 5744775 5743300 5747400 4 0 12\.\d+ 0\.193000
+chr1 3118025 3117750 3118550 4 0 12\.\d+ 0\.193000
+chr1 5660625 5659950 5661050 4 0 12\.\d+ 0\.193000
+chr1 5694925 5694400 5696050 4 0 12\.\d+ 0\.193000
+chr1 5496975 5495700 5499250 4 0 12\.\d+ 0\.193000
+chr1 5508775 5501700 5509950 4 0 12\.\d+ 0\.193000
+chr1 5515525 5514000 5516700 4 0 12\.\d+ 0\.193000
+chr1 5434275 5433650 5434750 4 0 12\.\d+ 0\.193000
+chr1 5440025 5439250 5440800 4 0 12\.\d+ 0\.193000
+chr1 5452325 5451600 5457500 4 0 12\.\d+ 0\.193000
+chr1 5550025 5548350 5551750 4 0 12\.\d+ 0\.193000
+chr1 5551125 5548350 5551750 4 0 12\.\d+ 0\.193000
+chr1 5587975 5575800 5590800 4 0 12\.\d+ 0\.193000
+chr1 5524325 5523650 5525000 4 0 12\.\d+ 0\.193000
+chr1 5529975 5529250 5531450 4 0 12\.\d+ 0\.193000
+chr1 5541075 5539550 5541750 4 0 12\.\d+ 0\.193000
+chr1 5205775 5205150 5206300 4 0 12\.\d+ 0\.193000
+chr1 4958925 4952100 4964300 4 0 12\.\d+ 0\.193000
+chr1 5090025 5082600 5090800 4 0 12\.\d+ 0\.193000
+chr1 5083375 5082600 5090800 4 0 12\.\d+ 0\.193000
+chr1 5133575 5128000 5136550 4 0 12\.\d+ 0\.193000
+chr1 4914225 4913050 4924250 4 0 12\.\d+ 0\.193000
+chr1 5116325 5113600 5116850 4 0 12\.\d+ 0\.193000
+chr1 5074275 5073700 5074850 4 0 12\.\d+ 0\.193000
+chr1 4975375 4974700 4976400 4 0 12\.\d+ 0\.193000
+chr1 5002325 5001700 5010700 4 0 12\.\d+ 0\.193000
+chr1 4997125 4991700 4999350 4 0 12\.\d+ 0\.193000
+chr1 5016275 5015500 5020500 4 0 12\.\d+ 0\.193000
+chr1 5010075 5001700 5010700 4 0 12\.\d+ 0\.193000
+chr1 5008625 5001700 5010700 4 0 12\.\d+ 0\.193000
+chr1 5135925 5128000 5136550 4 0 12\.\d+ 0\.193000
+chr1 5161975 5161200 5162750 4 0 12\.\d+ 0\.193000
+chr1 4919225 4913050 4924250 4 0 12\.\d+ 0\.193000
+chr1 5139025 5138250 5139800 4 0 12\.\d+ 0\.193000
+chr1 4895575 4889250 4896100 4 0 12\.\d+ 0\.193000
+chr1 4323875 4323250 4324550 47 4 11\.\d+ 1\.000000
+chr1 4629425 4629150 4629700 9 1 7\.\d+ 1\.000000
+chr1 3462625 3462250 3463300 8 1 6\.\d+ 1\.000000
+chr1 3559825 3559550 3560150 7 1 5\.\d+ 1\.000000
+chr1 3677375 3677100 3677700 7 1 5\.\d+ 1\.000000
+chr1 4247375 4247100 4247650 11 2 5\.\d+ 1\.000000
diff -r 000000000000 -r a0c8dc671a23 test-data/peakcalling_ccat/3.0/ccat_test_peak_out_2.interval.re_match
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/peakcalling_ccat/3.0/ccat_test_peak_out_2.interval.re_match Mon Jan 27 09:27:03 2014 -0500
@@ -0,0 +1,272 @@
+chr1 4760225 4725450 4779800 139 0 507\.\d+ 0\.025000
+chr1 4761625 4725450 4779800 87 0 318\.\d+ 0\.025000
+chr1 4771925 4725450 4779800 48 0 175\.\d+ 0\.025000
+chr1 5061725 5053400 5068550 19 0 69\.\d+ 0\.025000
+chr1 5174775 5163300 5181450 19 0 69\.\d+ 0\.025000
+chr1 5094825 5080750 5101500 19 0 69\.\d+ 0\.025000
+chr1 5593825 5575300 5618600 17 0 62\.\d+ 0\.025000
+chr1 5198075 5193000 5227900 17 0 62\.\d+ 0\.025000
+chr1 5177325 5163300 5181450 17 0 62\.\d+ 0\.025000
+chr1 4740175 4725450 4779800 16 0 58\.\d+ 0\.025000
+chr1 4716275 4707550 4722700 16 0 58\.\d+ 0\.025000
+chr1 4961575 4951600 4964800 15 0 54\.\d+ 0\.025000
+chr1 4996075 4990250 5026600 15 0 54\.\d+ 0\.025000
+chr1 5201925 5193000 5227900 15 0 54\.\d+ 0\.025000
+chr1 5132075 5121600 5140300 14 0 51\.\d+ 0\.025000
+chr1 4820975 4818750 4863650 14 0 51\.\d+ 0\.025000
+chr1 4902375 4888750 4938450 14 0 51\.\d+ 0\.025000
+chr1 4811575 4798500 4818650 14 0 51\.\d+ 0\.025000
+chr1 4792775 4788500 4798400 14 0 51\.\d+ 0\.025000
+chr1 4830375 4818750 4863650 14 0 51\.\d+ 0\.025000
+chr1 4892125 4888750 4938450 14 0 51\.\d+ 0\.025000
+chr1 4745275 4725450 4779800 14 0 51\.\d+ 0\.025000
+chr1 5220875 5193000 5227900 13 0 47\.\d+ 0\.025000
+chr1 4908725 4888750 4938450 13 0 47\.\d+ 0\.025000
+chr1 5224025 5193000 5227900 13 0 47\.\d+ 0\.025000
+chr1 4744125 4725450 4779800 13 0 47\.\d+ 0\.025000
+chr1 4666375 4662050 4671350 13 0 47\.\d+ 0\.025000
+chr1 4747725 4725450 4779800 13 0 47\.\d+ 0\.025000
+chr1 5130175 5121600 5140300 13 0 47\.\d+ 0\.025000
+chr1 4933975 4888750 4938450 13 0 47\.\d+ 0\.025000
+chr1 5078525 5073200 5080700 13 0 47\.\d+ 0\.025000
+chr1 4849775 4818750 4863650 13 0 47\.\d+ 0\.025000
+chr1 4861025 4818750 4863650 13 0 47\.\d+ 0\.025000
+chr1 5649475 5645550 5668850 13 0 47\.\d+ 0\.025000
+chr1 5208475 5193000 5227900 13 0 47\.\d+ 0\.025000
+chr1 5249925 5247000 5258700 13 0 47\.\d+ 0\.025000
+chr1 4766525 4725450 4779800 12 0 43\.\d+ 0\.025000
+chr1 4872625 4871150 4888250 12 0 43\.\d+ 0\.025000
+chr1 4955475 4951600 4964800 12 0 43\.\d+ 0\.025000
+chr1 4764075 4725450 4779800 12 0 43\.\d+ 0\.025000
+chr1 4906075 4888750 4938450 12 0 43\.\d+ 0\.025000
+chr1 4915375 4888750 4938450 12 0 43\.\d+ 0\.025000
+chr1 5510825 5501200 5517200 12 0 43\.\d+ 0\.025000
+chr1 5306825 5300700 5319250 12 0 43\.\d+ 0\.025000
+chr1 4917725 4888750 4938450 12 0 43\.\d+ 0\.025000
+chr1 4967025 4965050 4970850 12 0 43\.\d+ 0\.025000
+chr1 4926725 4888750 4938450 12 0 43\.\d+ 0\.025000
+chr1 4753075 4725450 4779800 12 0 43\.\d+ 0\.025000
+chr1 4714125 4707550 4722700 12 0 43\.\d+ 0\.025000
+chr1 4998375 4990250 5026600 12 0 43\.\d+ 0\.025000
+chr1 4936475 4888750 4938450 12 0 43\.\d+ 0\.025000
+chr1 4734675 4725450 4779800 12 0 43\.\d+ 0\.025000
+chr1 4662925 4662050 4671350 12 0 43\.\d+ 0\.025000
+chr1 5106525 5105050 5117450 11 0 40\.\d+ 0\.034000
+chr1 4712625 4707550 4722700 11 0 40\.\d+ 0\.034000
+chr1 5653275 5645550 5668850 11 0 40\.\d+ 0\.034000
+chr1 5429475 5427200 5435250 11 0 40\.\d+ 0\.034000
+chr1 4806725 4798500 4818650 11 0 40\.\d+ 0\.034000
+chr1 5412475 5406500 5414000 11 0 40\.\d+ 0\.034000
+chr1 4692075 4673000 4701600 11 0 40\.\d+ 0\.034000
+chr1 5179175 5163300 5181450 11 0 40\.\d+ 0\.034000
+chr1 5726025 5720500 5731000 11 0 40\.\d+ 0\.034000
+chr1 4899375 4888750 4938450 11 0 40\.\d+ 0\.034000
+chr1 4844375 4818750 4863650 11 0 40\.\d+ 0\.034000
+chr1 4834175 4818750 4863650 11 0 40\.\d+ 0\.034000
+chr1 5386675 5368500 5389350 11 0 40\.\d+ 0\.034000
+chr1 4696075 4673000 4701600 11 0 40\.\d+ 0\.034000
+chr1 5004175 4990250 5026600 11 0 40\.\d+ 0\.034000
+chr1 4736575 4725450 4779800 11 0 40\.\d+ 0\.034000
+chr1 5286125 5282250 5299950 11 0 40\.\d+ 0\.034000
+chr1 4750225 4725450 4779800 11 0 40\.\d+ 0\.034000
+chr1 5616675 5575300 5618600 11 0 40\.\d+ 0\.034000
+chr1 5570325 5567450 5573850 11 0 40\.\d+ 0\.034000
+chr1 4769675 4725450 4779800 11 0 40\.\d+ 0\.034000
+chr1 5270275 5269300 5281550 11 0 40\.\d+ 0\.034000
+chr1 5045675 5044200 5048700 11 0 40\.\d+ 0\.034000
+chr1 5532875 5521900 5536850 11 0 40\.\d+ 0\.034000
+chr1 4981425 4978900 4987150 10 0 36\.\d+ 0\.034000
+chr1 5311175 5300700 5319250 10 0 36\.\d+ 0\.034000
+chr1 5267725 5263750 5268900 10 0 36\.\d+ 0\.034000
+chr1 4882475 4871150 4888250 10 0 36\.\d+ 0\.034000
+chr1 5019075 4990250 5026600 10 0 36\.\d+ 0\.034000
+chr1 4921725 4888750 4938450 10 0 36\.\d+ 0\.034000
+chr1 4669975 4662050 4671350 10 0 36\.\d+ 0\.034000
+chr1 4754675 4725450 4779800 10 0 36\.\d+ 0\.034000
+chr1 4945325 4943900 4949650 10 0 36\.\d+ 0\.034000
+chr1 4858075 4818750 4863650 10 0 36\.\d+ 0\.034000
+chr1 4687925 4673000 4701600 10 0 36\.\d+ 0\.034000
+chr1 5442625 5438750 5445150 10 0 36\.\d+ 0\.034000
+chr1 5151825 5140350 5157200 10 0 36\.\d+ 0\.034000
+chr1 4874625 4871150 4888250 10 0 36\.\d+ 0\.034000
+chr1 4963275 4951600 4964800 10 0 36\.\d+ 0\.034000
+chr1 4795025 4788500 4798400 10 0 36\.\d+ 0\.034000
+chr1 4732225 4725450 4779800 10 0 36\.\d+ 0\.034000
+chr1 4805025 4798500 4818650 10 0 36\.\d+ 0\.034000
+chr1 5057075 5053400 5068550 10 0 36\.\d+ 0\.034000
+chr1 5216925 5193000 5227900 10 0 36\.\d+ 0\.034000
+chr1 5211875 5193000 5227900 10 0 36\.\d+ 0\.034000
+chr1 5167425 5163300 5181450 10 0 36\.\d+ 0\.034000
+chr1 5305425 5300700 5319250 10 0 36\.\d+ 0\.034000
+chr1 5277575 5269300 5281550 9 0 32\.\d+ 0\.034000
+chr1 5289075 5282250 5299950 9 0 32\.\d+ 0\.034000
+chr1 5292575 5282250 5299950 9 0 32\.\d+ 0\.034000
+chr1 5114025 5105050 5117450 9 0 32\.\d+ 0\.034000
+chr1 5213875 5193000 5227900 9 0 32\.\d+ 0\.034000
+chr1 4880375 4871150 4888250 9 0 32\.\d+ 0\.034000
+chr1 5585925 5575300 5618600 9 0 32\.\d+ 0\.034000
+chr1 5122775 5121600 5140300 9 0 32\.\d+ 0\.034000
+chr1 4727125 4725450 4779800 9 0 32\.\d+ 0\.034000
+chr1 5571725 5567450 5573850 9 0 32\.\d+ 0\.034000
+chr1 5577575 5575300 5618600 9 0 32\.\d+ 0\.034000
+chr1 5581825 5575300 5618600 9 0 32\.\d+ 0\.034000
+chr1 5651825 5645550 5668850 9 0 32\.\d+ 0\.034000
+chr1 5014125 4990250 5026600 9 0 32\.\d+ 0\.034000
+chr1 5746175 5741000 5748200 9 0 32\.\d+ 0\.034000
+chr1 5012025 4990250 5026600 9 0 32\.\d+ 0\.034000
+chr1 5024225 4990250 5026600 9 0 32\.\d+ 0\.034000
+chr1 4953925 4951600 4964800 9 0 32\.\d+ 0\.034000
+chr1 5017375 4990250 5026600 9 0 32\.\d+ 0\.034000
+chr1 5055275 5053400 5068550 9 0 32\.\d+ 0\.034000
+chr1 5409325 5406500 5414000 9 0 32\.\d+ 0\.034000
+chr1 4815475 4798500 4818650 9 0 32\.\d+ 0\.034000
+chr1 5448375 5445350 5450050 9 0 32\.\d+ 0\.034000
+chr1 4865425 4863900 4870300 9 0 32\.\d+ 0\.034000
+chr1 5195375 5193000 5227900 9 0 32\.\d+ 0\.034000
+chr1 4839075 4818750 4863650 9 0 32\.\d+ 0\.034000
+chr1 5064875 5053400 5068550 9 0 32\.\d+ 0\.034000
+chr1 4789875 4788500 4798400 9 0 32\.\d+ 0\.034000
+chr1 4775475 4725450 4779800 9 0 32\.\d+ 0\.034000
+chr1 5148975 5140350 5157200 9 0 32\.\d+ 0\.034000
+chr1 4801775 4798500 4818650 9 0 32\.\d+ 0\.034000
+chr1 5134725 5121600 5140300 8 0 29\.\d+ 0\.034000
+chr1 5153825 5140350 5157200 8 0 29\.\d+ 0\.034000
+chr1 5125725 5121600 5140300 8 0 29\.\d+ 0\.034000
+chr1 4910475 4888750 4938450 8 0 29\.\d+ 0\.034000
+chr1 5568875 5567450 5573850 8 0 29\.\d+ 0\.034000
+chr1 5579625 5575300 5618600 8 0 29\.\d+ 0\.034000
+chr1 5612475 5575300 5618600 8 0 29\.\d+ 0\.034000
+chr1 5530525 5521900 5536850 8 0 29\.\d+ 0\.034000
+chr1 4799975 4798500 4818650 8 0 29\.\d+ 0\.034000
+chr1 5059225 5053400 5068550 8 0 29\.\d+ 0\.034000
+chr1 4776725 4725450 4779800 8 0 29\.\d+ 0\.034000
+chr1 5614975 5575300 5618600 8 0 29\.\d+ 0\.034000
+chr1 5706725 5703650 5710750 8 0 29\.\d+ 0\.034000
+chr1 5022575 4990250 5026600 8 0 29\.\d+ 0\.034000
+chr1 4681875 4673000 4701600 8 0 29\.\d+ 0\.034000
+chr1 4697975 4673000 4701600 8 0 29\.\d+ 0\.034000
+chr1 5647075 5645550 5668850 8 0 29\.\d+ 0\.034000
+chr1 4711275 4707550 4722700 8 0 29\.\d+ 0\.034000
+chr1 5679325 5675600 5681850 8 0 29\.\d+ 0\.034000
+chr1 5401025 5390850 5406350 8 0 29\.\d+ 0\.034000
+chr1 5313325 5300700 5319250 8 0 29\.\d+ 0\.034000
+chr1 5315275 5300700 5319250 8 0 29\.\d+ 0\.034000
+chr1 5324575 5322550 5334750 8 0 29\.\d+ 0\.034000
+chr1 5295575 5282250 5299950 8 0 29\.\d+ 0\.034000
+chr1 5229925 5228750 5242150 8 0 29\.\d+ 0\.034000
+chr1 5253675 5247000 5258700 8 0 29\.\d+ 0\.034000
+chr1 5264925 5263750 5268900 8 0 29\.\d+ 0\.034000
+chr1 5364775 5357550 5366350 8 0 29\.\d+ 0\.034000
+chr1 5370375 5368500 5389350 8 0 29\.\d+ 0\.034000
+chr1 5384575 5368500 5389350 8 0 29\.\d+ 0\.034000
+chr1 4817175 4798500 4818650 8 0 29\.\d+ 0\.034000
+chr1 5088225 5080750 5101500 8 0 29\.\d+ 0\.034000
+chr1 5112225 5105050 5117450 7 0 25\.\d+ 0\.135000
+chr1 4993575 4990250 5026600 7 0 25\.\d+ 0\.135000
+chr1 5086225 5080750 5101500 7 0 25\.\d+ 0\.135000
+chr1 5110775 5105050 5117450 7 0 25\.\d+ 0\.135000
+chr1 5550725 5547250 5552250 7 0 25\.\d+ 0\.135000
+chr1 5588325 5575300 5618600 7 0 25\.\d+ 0\.135000
+chr1 5596475 5575300 5618600 7 0 25\.\d+ 0\.135000
+chr1 5548775 5547250 5552250 7 0 25\.\d+ 0\.135000
+chr1 5496625 5495200 5499750 7 0 25\.\d+ 0\.135000
+chr1 4787225 4783350 4788300 7 0 25\.\d+ 0\.135000
+chr1 5515275 5501200 5517200 7 0 25\.\d+ 0\.135000
+chr1 4709775 4707550 4722700 7 0 25\.\d+ 0\.135000
+chr1 4678725 4673000 4701600 7 0 25\.\d+ 0\.135000
+chr1 5742375 5741000 5748200 7 0 25\.\d+ 0\.135000
+chr1 5751925 5749150 5753500 7 0 25\.\d+ 0\.135000
+chr1 5718625 5711700 5719950 7 0 25\.\d+ 0\.135000
+chr1 5695175 5693900 5701400 7 0 25\.\d+ 0\.135000
+chr1 5696975 5693900 5701400 7 0 25\.\d+ 0\.135000
+chr1 5716025 5711700 5719950 7 0 25\.\d+ 0\.135000
+chr1 5453625 5450900 5458700 7 0 25\.\d+ 0\.135000
+chr1 5297125 5282250 5299950 7 0 25\.\d+ 0\.135000
+chr1 5317425 5300700 5319250 7 0 25\.\d+ 0\.135000
+chr1 5280075 5269300 5281550 7 0 25\.\d+ 0\.135000
+chr1 5240425 5228750 5242150 7 0 25\.\d+ 0\.135000
+chr1 5256175 5247000 5258700 7 0 25\.\d+ 0\.135000
+chr1 5327875 5322550 5334750 7 0 25\.\d+ 0\.135000
+chr1 4931075 4888750 4938450 7 0 25\.\d+ 0\.135000
+chr1 5355975 5352900 5357500 7 0 25\.\d+ 0\.135000
+chr1 5143275 5140350 5157200 7 0 25\.\d+ 0\.135000
+chr1 4855175 4818750 4863650 7 0 25\.\d+ 0\.135000
+chr1 4897425 4888750 4938450 6 0 21\.\d+ 0\.135000
+chr1 5008925 4990250 5026600 6 0 21\.\d+ 0\.135000
+chr1 4853125 4818750 4863650 6 0 21\.\d+ 0\.135000
+chr1 4841375 4818750 4863650 6 0 21\.\d+ 0\.135000
+chr1 4975525 4974200 4976900 6 0 21\.\d+ 0\.135000
+chr1 4885775 4871150 4888250 6 0 21\.\d+ 0\.135000
+chr1 5002675 4990250 5026600 6 0 21\.\d+ 0\.135000
+chr1 5505875 5501200 5517200 6 0 21\.\d+ 0\.135000
+chr1 5331125 5322550 5334750 6 0 21\.\d+ 0\.135000
+chr1 5138925 5121600 5140300 6 0 21\.\d+ 0\.135000
+chr1 5632975 5631350 5638100 6 0 21\.\d+ 0\.135000
+chr1 5354175 5352900 5357500 6 0 21\.\d+ 0\.135000
+chr1 5361225 5357550 5366350 6 0 21\.\d+ 0\.135000
+chr1 5348875 5347750 5349950 6 0 21\.\d+ 0\.135000
+chr1 5656025 5645550 5668850 6 0 21\.\d+ 0\.135000
+chr1 5236125 5228750 5242150 6 0 21\.\d+ 0\.135000
+chr1 5234575 5228750 5242150 6 0 21\.\d+ 0\.135000
+chr1 5273425 5269300 5281550 6 0 21\.\d+ 0\.135000
+chr1 5539925 5538950 5542250 6 0 21\.\d+ 0\.135000
+chr1 5606225 5575300 5618600 6 0 21\.\d+ 0\.135000
+chr1 5621625 5618950 5622950 6 0 21\.\d+ 0\.135000
+chr1 5507675 5501200 5517200 6 0 21\.\d+ 0\.135000
+chr1 5164425 5163300 5181450 6 0 21\.\d+ 0\.135000
+chr1 5119225 5117850 5121550 6 0 21\.\d+ 0\.135000
+chr1 5456475 5450900 5458700 6 0 21\.\d+ 0\.135000
+chr1 5487825 5482700 5489150 6 0 21\.\d+ 0\.135000
+chr1 5374275 5368500 5389350 6 0 21\.\d+ 0\.135000
+chr1 5440025 5438750 5445150 6 0 21\.\d+ 0\.135000
+chr1 5431425 5427200 5435250 6 0 21\.\d+ 0\.135000
+chr1 5744425 5741000 5748200 6 0 21\.\d+ 0\.135000
+chr1 5083325 5080750 5101500 6 0 21\.\d+ 0\.135000
+chr1 5666375 5645550 5668850 6 0 21\.\d+ 0\.135000
+chr1 5688775 5687300 5691900 6 0 21\.\d+ 0\.135000
+chr1 5372525 5368500 5389350 6 0 21\.\d+ 0\.135000
+chr1 5092375 5080750 5101500 6 0 21\.\d+ 0\.135000
+chr1 5097675 5080750 5101500 6 0 21\.\d+ 0\.135000
+chr1 4507925 4507250 4509100 44 2 20\.\d+ 0\.199000
+chr1 5524125 5521900 5536850 5 0 18\.\d+ 0\.199000
+chr1 5283375 5282250 5299950 5 0 18\.\d+ 0\.199000
+chr1 4877125 4871150 4888250 5 0 18\.\d+ 0\.199000
+chr1 4784575 4783350 4788300 5 0 18\.\d+ 0\.199000
+chr1 5475625 5474600 5479600 5 0 18\.\d+ 0\.199000
+chr1 5502325 5501200 5517200 5 0 18\.\d+ 0\.199000
+chr1 5396875 5390850 5406350 5 0 18\.\d+ 0\.199000
+chr1 4781325 4780250 4782350 5 0 18\.\d+ 0\.199000
+chr1 5395375 5390850 5406350 5 0 18\.\d+ 0\.199000
+chr1 4729475 4725450 4779800 5 0 18\.\d+ 0\.199000
+chr1 5664225 5645550 5668850 5 0 18\.\d+ 0\.199000
+chr1 5137425 5121600 5140300 5 0 18\.\d+ 0\.199000
+chr1 5635025 5631350 5638100 5 0 18\.\d+ 0\.199000
+chr1 5039275 5037850 5040800 5 0 18\.\d+ 0\.199000
+chr1 5722875 5720500 5731000 5 0 18\.\d+ 0\.199000
+chr1 5116025 5105050 5117450 5 0 18\.\d+ 0\.199000
+chr1 4674175 4673000 4701600 5 0 18\.\d+ 0\.199000
+chr1 5603475 5575300 5618600 5 0 18\.\d+ 0\.199000
+chr1 5598575 5575300 5618600 5 0 18\.\d+ 0\.199000
+chr1 5591875 5575300 5618600 5 0 18\.\d+ 0\.199000
+chr1 5232775 5228750 5242150 5 0 18\.\d+ 0\.199000
+chr1 5205575 5193000 5227900 5 0 18\.\d+ 0\.199000
+chr1 5161725 5159000 5163250 5 0 18\.\d+ 0\.199000
+chr1 4337875 4336700 4338600 60 4 14\.\d+ 0\.199000
+chr1 4676625 4673000 4701600 4 0 14\.\d+ 1\.000000
+chr1 5564125 5562650 5566050 4 0 14\.\d+ 1\.000000
+chr1 3023575 3022750 3024750 4 0 14\.\d+ 1\.000000
+chr1 5584125 5575300 5618600 4 0 14\.\d+ 1\.000000
+chr1 5660675 5645550 5668850 4 0 14\.\d+ 1\.000000
+chr1 5637125 5631350 5638100 4 0 14\.\d+ 1\.000000
+chr1 5699925 5693900 5701400 4 0 14\.\d+ 1\.000000
+chr1 5485175 5482700 5489150 4 0 14\.\d+ 1\.000000
+chr1 5712725 5711700 5719950 4 0 14\.\d+ 1\.000000
+chr1 5434275 5427200 5435250 4 0 14\.\d+ 1\.000000
+chr1 5377125 5368500 5389350 4 0 14\.\d+ 1\.000000
+chr1 5237875 5228750 5242150 4 0 14\.\d+ 1\.000000
+chr1 4984925 4978900 4987150 4 0 14\.\d+ 1\.000000
+chr1 5302025 5300700 5319250 4 0 14\.\d+ 1\.000000
+chr1 5381625 5368500 5389350 4 0 14\.\d+ 1\.000000
+chr1 5033175 5032000 5036100 4 0 14\.\d+ 1\.000000
+chr1 4408525 4407200 4409200 88 13 6\.\d+ 1\.000000
+chr1 4324025 4322650 4324900 48 7 6\.\d+ 1\.000000
diff -r 000000000000 -r a0c8dc671a23 test-data/peakcalling_ccat/3.0/ccat_test_region_out_1.interval.re_match
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/peakcalling_ccat/3.0/ccat_test_region_out_1.interval.re_match Mon Jan 27 09:27:03 2014 -0500
@@ -0,0 +1,183 @@
+chr1 4760025 4756750 4762650 128 0 399\.\d+ 0\.133000
+chr1 4771725 4768050 4778800 37 0 115\.\d+ 0\.133000
+chr1 5061925 5060800 5063500 15 0 46\.\d+ 0\.133000
+chr1 5174925 5172300 5175650 15 0 46\.\d+ 0\.133000
+chr1 5198225 5193500 5203550 13 0 40\.\d+ 0\.133000
+chr1 5094525 5090900 5098600 12 0 37\.\d+ 0\.133000
+chr1 5649775 5646050 5655200 12 0 37\.\d+ 0\.133000
+chr1 5250175 5247500 5252250 11 0 34\.\d+ 0\.189000
+chr1 4861125 4856150 4863100 11 0 34\.\d+ 0\.189000
+chr1 4830175 4828350 4831300 11 0 34\.\d+ 0\.189000
+chr1 4764325 4763100 4767650 11 0 34\.\d+ 0\.189000
+chr1 5177075 5175750 5180950 11 0 34\.\d+ 0\.189000
+chr1 4961625 4952100 4964300 11 0 34\.\d+ 0\.189000
+chr1 4849575 4842300 4852000 10 0 31\.\d+ 0\.189000
+chr1 4908575 4907850 4911250 10 0 31\.\d+ 0\.189000
+chr1 4792275 4789000 4793650 10 0 31\.\d+ 0\.189000
+chr1 4996125 4991700 4999350 10 0 31\.\d+ 0\.189000
+chr1 5270525 5269800 5276000 10 0 31\.\d+ 0\.189000
+chr1 5594075 5591050 5602000 10 0 31\.\d+ 0\.189000
+chr1 4740375 4733200 4746750 10 0 31\.\d+ 0\.189000
+chr1 4716525 4708050 4718500 10 0 31\.\d+ 0\.189000
+chr1 5132325 5128000 5136550 10 0 31\.\d+ 0\.189000
+chr1 4666125 4665400 4667400 9 0 28\.\d+ 0\.189000
+chr1 4806875 4800850 4808250 9 0 28\.\d+ 0\.189000
+chr1 5306625 5303150 5309300 9 0 28\.\d+ 0\.189000
+chr1 4747475 4746800 4756450 9 0 28\.\d+ 0\.189000
+chr1 5616925 5614250 5618100 9 0 28\.\d+ 0\.189000
+chr1 4732075 4728950 4732850 9 0 28\.\d+ 0\.189000
+chr1 5311275 5309550 5312000 9 0 28\.\d+ 0\.189000
+chr1 4811775 4809250 4818000 9 0 28\.\d+ 0\.189000
+chr1 5078275 5075400 5080200 9 0 28\.\d+ 0\.189000
+chr1 5510975 5510050 5511700 9 0 28\.\d+ 0\.189000
+chr1 5267625 5265900 5268400 9 0 28\.\d+ 0\.189000
+chr1 4902125 4896550 4904200 9 0 28\.\d+ 0\.189000
+chr1 4891925 4889250 4896100 9 0 28\.\d+ 0\.189000
+chr1 5726225 5725050 5728250 9 0 28\.\d+ 0\.189000
+chr1 5221425 5215900 5227150 9 0 28\.\d+ 0\.189000
+chr1 4820775 4819250 4824400 9 0 28\.\d+ 0\.189000
+chr1 4663075 4662250 4664800 9 0 28\.\d+ 0\.189000
+chr1 4337575 4337150 4338250 54 2 25\.\d+ 0\.193000
+chr1 4882725 4879050 4885000 8 0 24\.\d+ 0\.193000
+chr1 4833925 4831400 4840050 8 0 24\.\d+ 0\.193000
+chr1 4936125 4935500 4937950 8 0 24\.\d+ 0\.193000
+chr1 4927275 4924450 4935350 8 0 24\.\d+ 0\.193000
+chr1 4915625 4913050 4924250 8 0 24\.\d+ 0\.193000
+chr1 5208725 5206650 5210650 8 0 24\.\d+ 0\.193000
+chr1 5045775 5044700 5048150 8 0 24\.\d+ 0\.193000
+chr1 4691975 4687200 4694150 8 0 24\.\d+ 0\.193000
+chr1 5055525 5053900 5058050 8 0 24\.\d+ 0\.193000
+chr1 5122725 5122100 5123350 8 0 24\.\d+ 0\.193000
+chr1 5429675 5427700 5430400 8 0 24\.\d+ 0\.193000
+chr1 4967025 4965550 4970250 8 0 24\.\d+ 0\.193000
+chr1 5412375 5411500 5413450 8 0 24\.\d+ 0\.193000
+chr1 5114275 5113600 5116850 8 0 24\.\d+ 0\.193000
+chr1 5384325 5383800 5385000 7 0 21\.\d+ 0\.193000
+chr1 5017525 5015500 5020500 7 0 21\.\d+ 0\.193000
+chr1 5386625 5385650 5387700 7 0 21\.\d+ 0\.193000
+chr1 5400875 5399200 5403500 7 0 21\.\d+ 0\.193000
+chr1 4872275 4871650 4875600 7 0 21\.\d+ 0\.193000
+chr1 5059325 5058600 5060000 7 0 21\.\d+ 0\.193000
+chr1 5229975 5229250 5231850 7 0 21\.\d+ 0\.193000
+chr1 5212225 5210850 5215150 7 0 21\.\d+ 0\.193000
+chr1 5314975 5312250 5316300 7 0 21\.\d+ 0\.193000
+chr1 5679225 5678650 5681350 7 0 21\.\d+ 0\.193000
+chr1 4696225 4694250 4697100 7 0 21\.\d+ 0\.193000
+chr1 5568475 5567950 5569000 7 0 21\.\d+ 0\.193000
+chr1 4905925 4905100 4907750 7 0 21\.\d+ 0\.193000
+chr1 5448175 5447500 5449550 7 0 21\.\d+ 0\.193000
+chr1 5570575 5569100 5573050 7 0 21\.\d+ 0\.193000
+chr1 5365125 5363650 5365850 7 0 21\.\d+ 0\.193000
+chr1 5004175 5001700 5010700 7 0 21\.\d+ 0\.193000
+chr1 4794975 4794200 4797900 7 0 21\.\d+ 0\.193000
+chr1 4944975 4944400 4947700 7 0 21\.\d+ 0\.193000
+chr1 4508175 4507350 4508650 41 2 19\.\d+ 0\.193000
+chr1 5125975 5124950 5127600 6 0 18\.\d+ 0\.193000
+chr1 5697075 5696100 5697750 6 0 18\.\d+ 0\.193000
+chr1 5256375 5255600 5256950 6 0 18\.\d+ 0\.193000
+chr1 5106325 5105550 5109300 6 0 18\.\d+ 0\.193000
+chr1 5706275 5704550 5709600 6 0 18\.\d+ 0\.193000
+chr1 5151525 5150800 5156200 6 0 18\.\d+ 0\.193000
+chr1 5167125 5165800 5169800 6 0 18\.\d+ 0\.193000
+chr1 4981675 4979400 4983450 6 0 18\.\d+ 0\.193000
+chr1 5011925 5010800 5015150 6 0 18\.\d+ 0\.193000
+chr1 5088175 5082600 5090800 6 0 18\.\d+ 0\.193000
+chr1 5240125 5239500 5241650 6 0 18\.\d+ 0\.193000
+chr1 5024625 5020800 5026100 6 0 18\.\d+ 0\.193000
+chr1 5065525 5063900 5068050 6 0 18\.\d+ 0\.193000
+chr1 4678925 4678250 4679650 6 0 18\.\d+ 0\.193000
+chr1 4670175 4668300 4670850 6 0 18\.\d+ 0\.193000
+chr1 5612875 5610500 5613650 6 0 18\.\d+ 0\.193000
+chr1 4697725 4697150 4699850 6 0 18\.\d+ 0\.193000
+chr1 3218225 3217950 3218650 6 0 18\.\d+ 0\.193000
+chr1 5348875 5348250 5349450 6 0 18\.\d+ 0\.193000
+chr1 5745875 5743300 5747400 6 0 18\.\d+ 0\.193000
+chr1 5512575 5511900 5513200 6 0 18\.\d+ 0\.193000
+chr1 5577775 5575800 5590800 6 0 18\.\d+ 0\.193000
+chr1 5442275 5441650 5444200 6 0 18\.\d+ 0\.193000
+chr1 5453725 5451600 5457500 6 0 18\.\d+ 0\.193000
+chr1 5549025 5548350 5551750 6 0 18\.\d+ 0\.193000
+chr1 5409525 5407000 5411350 6 0 18\.\d+ 0\.193000
+chr1 5751675 5751000 5752900 6 0 18\.\d+ 0\.193000
+chr1 5532625 5531900 5534450 6 0 18\.\d+ 0\.193000
+chr1 5295475 5294850 5299450 6 0 18\.\d+ 0\.193000
+chr1 4799975 4799000 4800750 6 0 18\.\d+ 0\.193000
+chr1 4865525 4864400 4866300 6 0 18\.\d+ 0\.193000
+chr1 5718675 5716950 5719450 6 0 18\.\d+ 0\.193000
+chr1 5285775 5285150 5287400 6 0 18\.\d+ 0\.193000
+chr1 5279825 5279200 5281050 6 0 18\.\d+ 0\.193000
+chr1 5277575 5276150 5279150 6 0 18\.\d+ 0\.193000
+chr1 5324825 5323050 5329500 6 0 18\.\d+ 0\.193000
+chr1 4787025 4786400 4787800 6 0 18\.\d+ 0\.193000
+chr1 5265025 5264250 5265800 6 0 18\.\d+ 0\.193000
+chr1 4408225 4407650 4408750 81 5 16\.\d+ 0\.193000
+chr1 5119075 5118350 5121050 5 0 15\.\d+ 0\.193000
+chr1 4855025 4854250 4856100 5 0 15\.\d+ 0\.193000
+chr1 5514725 5514000 5516700 5 0 15\.\d+ 0\.193000
+chr1 5110675 5109600 5112950 5 0 15\.\d+ 0\.193000
+chr1 4885925 4885150 4886550 5 0 15\.\d+ 0\.193000
+chr1 5540175 5539550 5541750 5 0 15\.\d+ 0\.193000
+chr1 5621725 5621000 5622450 5 0 15\.\d+ 0\.193000
+chr1 4681775 4679750 4684100 5 0 15\.\d+ 0\.193000
+chr1 3832625 3831950 3833100 5 0 15\.\d+ 0\.193000
+chr1 5655975 5655300 5656700 5 0 15\.\d+ 0\.193000
+chr1 4727375 4725950 4728150 5 0 15\.\d+ 0\.193000
+chr1 5633525 5631850 5636000 5 0 15\.\d+ 0\.193000
+chr1 4674175 4673500 4675550 5 0 15\.\d+ 0\.193000
+chr1 5497825 5495700 5499250 5 0 15\.\d+ 0\.193000
+chr1 4092425 4091800 4092950 5 0 15\.\d+ 0\.193000
+chr1 5506125 5501700 5509950 5 0 15\.\d+ 0\.193000
+chr1 5487775 5487100 5488500 5 0 15\.\d+ 0\.193000
+chr1 5666675 5666250 5667300 5 0 15\.\d+ 0\.193000
+chr1 5606575 5604350 5609750 5 0 15\.\d+ 0\.193000
+chr1 5137425 5136800 5138000 5 0 15\.\d+ 0\.193000
+chr1 5370725 5369000 5375550 5 0 15\.\d+ 0\.193000
+chr1 5714575 5714000 5716900 5 0 15\.\d+ 0\.193000
+chr1 5356225 5353400 5357000 5 0 15\.\d+ 0\.193000
+chr1 5253325 5252750 5255300 5 0 15\.\d+ 0\.193000
+chr1 5164475 5163800 5165200 5 0 15\.\d+ 0\.193000
+chr1 5148625 5148200 5150600 5 0 15\.\d+ 0\.193000
+chr1 3139075 3138350 3139350 5 0 15\.\d+ 0\.193000
+chr1 5142775 5141600 5144200 5 0 15\.\d+ 0\.193000
+chr1 5475625 5475100 5477300 5 0 15\.\d+ 0\.193000
+chr1 5292275 5291650 5293450 5 0 15\.\d+ 0\.193000
+chr1 5742225 5741500 5743250 5 0 15\.\d+ 0\.193000
+chr1 5288675 5288100 5291550 5 0 15\.\d+ 0\.193000
+chr1 3054875 3054500 3055300 5 0 15\.\d+ 0\.193000
+chr1 3118025 3117750 3118550 4 0 12\.\d+ 0\.193000
+chr1 5603725 5602100 5604250 4 0 12\.\d+ 0\.193000
+chr1 5205775 5205150 5206300 4 0 12\.\d+ 0\.193000
+chr1 5395225 5394650 5396000 4 0 12\.\d+ 0\.193000
+chr1 5396675 5396050 5398750 4 0 12\.\d+ 0\.193000
+chr1 5431675 5430850 5433300 4 0 12\.\d+ 0\.193000
+chr1 5660625 5659950 5661050 4 0 12\.\d+ 0\.193000
+chr1 5161975 5161200 5162750 4 0 12\.\d+ 0\.193000
+chr1 5657525 5657150 5658300 4 0 12\.\d+ 0\.193000
+chr1 4975375 4974700 4976400 4 0 12\.\d+ 0\.193000
+chr1 4887025 4886600 4887750 4 0 12\.\d+ 0\.193000
+chr1 3196025 3195750 3196350 4 0 12\.\d+ 0\.193000
+chr1 5257475 5257000 5258200 4 0 12\.\d+ 0\.193000
+chr1 4852675 4852100 4853850 4 0 12\.\d+ 0\.193000
+chr1 4877275 4876500 4878000 4 0 12\.\d+ 0\.193000
+chr1 5317175 5316400 5318750 4 0 12\.\d+ 0\.193000
+chr1 4781125 4780750 4781850 4 0 12\.\d+ 0\.193000
+chr1 4841375 4840600 4842150 4 0 12\.\d+ 0\.193000
+chr1 5232925 5232400 5233500 4 0 12\.\d+ 0\.193000
+chr1 5712725 5712200 5713300 4 0 12\.\d+ 0\.193000
+chr1 4784375 4783850 4785000 4 0 12\.\d+ 0\.193000
+chr1 5381625 5381000 5383200 4 0 12\.\d+ 0\.193000
+chr1 5234475 5233800 5237550 4 0 12\.\d+ 0\.193000
+chr1 3062525 3062250 3062900 4 0 12\.\d+ 0\.193000
+chr1 5440025 5439250 5440800 4 0 12\.\d+ 0\.193000
+chr1 5694925 5694400 5696050 4 0 12\.\d+ 0\.193000
+chr1 5139025 5138250 5139800 4 0 12\.\d+ 0\.193000
+chr1 5529975 5529250 5531450 4 0 12\.\d+ 0\.193000
+chr1 5434275 5433650 5434750 4 0 12\.\d+ 0\.193000
+chr1 5074275 5073700 5074850 4 0 12\.\d+ 0\.193000
+chr1 5524325 5523650 5525000 4 0 12\.\d+ 0\.193000
+chr1 4323875 4323250 4324550 47 4 11\.\d+ 1\.000000
+chr1 4629425 4629150 4629700 9 1 7\.\d+ 1\.000000
+chr1 3462625 3462250 3463300 8 1 6\.\d+ 1\.000000
+chr1 3677375 3677100 3677700 7 1 5\.\d+ 1\.000000
+chr1 3559825 3559550 3560150 7 1 5\.\d+ 1\.000000
+chr1 4247375 4247100 4247650 11 2 5\.\d+ 1\.000000
diff -r 000000000000 -r a0c8dc671a23 test-data/peakcalling_ccat/3.0/ccat_test_region_out_2.interval.re_match
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/peakcalling_ccat/3.0/ccat_test_region_out_2.interval.re_match Mon Jan 27 09:27:03 2014 -0500
@@ -0,0 +1,74 @@
+chr1 4760225 4725450 4779800 139 0 507\.\d+ 0\.025000
+chr1 5061725 5053400 5068550 19 0 69\.\d+ 0\.025000
+chr1 5094825 5080750 5101500 19 0 69\.\d+ 0\.025000
+chr1 5174775 5163300 5181450 19 0 69\.\d+ 0\.025000
+chr1 5198075 5193000 5227900 17 0 62\.\d+ 0\.025000
+chr1 5593825 5575300 5618600 17 0 62\.\d+ 0\.025000
+chr1 4716275 4707550 4722700 16 0 58\.\d+ 0\.025000
+chr1 4961575 4951600 4964800 15 0 54\.\d+ 0\.025000
+chr1 4996075 4990250 5026600 15 0 54\.\d+ 0\.025000
+chr1 4792775 4788500 4798400 14 0 51\.\d+ 0\.025000
+chr1 4820975 4818750 4863650 14 0 51\.\d+ 0\.025000
+chr1 4892125 4888750 4938450 14 0 51\.\d+ 0\.025000
+chr1 4811575 4798500 4818650 14 0 51\.\d+ 0\.025000
+chr1 5132075 5121600 5140300 14 0 51\.\d+ 0\.025000
+chr1 5078525 5073200 5080700 13 0 47\.\d+ 0\.025000
+chr1 5249925 5247000 5258700 13 0 47\.\d+ 0\.025000
+chr1 4666375 4662050 4671350 13 0 47\.\d+ 0\.025000
+chr1 5649475 5645550 5668850 13 0 47\.\d+ 0\.025000
+chr1 4872625 4871150 4888250 12 0 43\.\d+ 0\.025000
+chr1 5510825 5501200 5517200 12 0 43\.\d+ 0\.025000
+chr1 4967025 4965050 4970850 12 0 43\.\d+ 0\.025000
+chr1 5306825 5300700 5319250 12 0 43\.\d+ 0\.025000
+chr1 5270275 5269300 5281550 11 0 40\.\d+ 0\.034000
+chr1 5570325 5567450 5573850 11 0 40\.\d+ 0\.034000
+chr1 5106525 5105050 5117450 11 0 40\.\d+ 0\.034000
+chr1 5045675 5044200 5048700 11 0 40\.\d+ 0\.034000
+chr1 5532875 5521900 5536850 11 0 40\.\d+ 0\.034000
+chr1 5429475 5427200 5435250 11 0 40\.\d+ 0\.034000
+chr1 5726025 5720500 5731000 11 0 40\.\d+ 0\.034000
+chr1 5386675 5368500 5389350 11 0 40\.\d+ 0\.034000
+chr1 4692075 4673000 4701600 11 0 40\.\d+ 0\.034000
+chr1 5286125 5282250 5299950 11 0 40\.\d+ 0\.034000
+chr1 5412475 5406500 5414000 11 0 40\.\d+ 0\.034000
+chr1 5151825 5140350 5157200 10 0 36\.\d+ 0\.034000
+chr1 4945325 4943900 4949650 10 0 36\.\d+ 0\.034000
+chr1 5267725 5263750 5268900 10 0 36\.\d+ 0\.034000
+chr1 5442625 5438750 5445150 10 0 36\.\d+ 0\.034000
+chr1 4981425 4978900 4987150 10 0 36\.\d+ 0\.034000
+chr1 5746175 5741000 5748200 9 0 32\.\d+ 0\.034000
+chr1 4865425 4863900 4870300 9 0 32\.\d+ 0\.034000
+chr1 5448375 5445350 5450050 9 0 32\.\d+ 0\.034000
+chr1 5706725 5703650 5710750 8 0 29\.\d+ 0\.034000
+chr1 5679325 5675600 5681850 8 0 29\.\d+ 0\.034000
+chr1 5229925 5228750 5242150 8 0 29\.\d+ 0\.034000
+chr1 5364775 5357550 5366350 8 0 29\.\d+ 0\.034000
+chr1 5401025 5390850 5406350 8 0 29\.\d+ 0\.034000
+chr1 5324575 5322550 5334750 8 0 29\.\d+ 0\.034000
+chr1 5355975 5352900 5357500 7 0 25\.\d+ 0\.135000
+chr1 5548775 5547250 5552250 7 0 25\.\d+ 0\.135000
+chr1 5716025 5711700 5719950 7 0 25\.\d+ 0\.135000
+chr1 5496625 5495200 5499750 7 0 25\.\d+ 0\.135000
+chr1 5695175 5693900 5701400 7 0 25\.\d+ 0\.135000
+chr1 4787225 4783350 4788300 7 0 25\.\d+ 0\.135000
+chr1 5751925 5749150 5753500 7 0 25\.\d+ 0\.135000
+chr1 5453625 5450900 5458700 7 0 25\.\d+ 0\.135000
+chr1 5688775 5687300 5691900 6 0 21\.\d+ 0\.135000
+chr1 5632975 5631350 5638100 6 0 21\.\d+ 0\.135000
+chr1 4975525 4974200 4976900 6 0 21\.\d+ 0\.135000
+chr1 5487825 5482700 5489150 6 0 21\.\d+ 0\.135000
+chr1 5539925 5538950 5542250 6 0 21\.\d+ 0\.135000
+chr1 5348875 5347750 5349950 6 0 21\.\d+ 0\.135000
+chr1 5621625 5618950 5622950 6 0 21\.\d+ 0\.135000
+chr1 5119225 5117850 5121550 6 0 21\.\d+ 0\.135000
+chr1 4507925 4507250 4509100 44 2 20\.\d+ 0\.199000
+chr1 5161725 5159000 5163250 5 0 18\.\d+ 0\.199000
+chr1 4781325 4780250 4782350 5 0 18\.\d+ 0\.199000
+chr1 5475625 5474600 5479600 5 0 18\.\d+ 0\.199000
+chr1 5039275 5037850 5040800 5 0 18\.\d+ 0\.199000
+chr1 4337875 4336700 4338600 60 4 14\.\d+ 0\.199000
+chr1 3023575 3022750 3024750 4 0 14\.\d+ 1\.000000
+chr1 5033175 5032000 5036100 4 0 14\.\d+ 1\.000000
+chr1 5564125 5562650 5566050 4 0 14\.\d+ 1\.000000
+chr1 4408525 4407200 4409200 88 13 6\.\d+ 1\.000000
+chr1 4324025 4322650 4324900 48 7 6\.\d+ 1\.000000
diff -r 000000000000 -r a0c8dc671a23 test-data/peakcalling_ccat/3.0/ccat_test_top_out_1.interval.sorted.re_match
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/peakcalling_ccat/3.0/ccat_test_top_out_1.interval.sorted.re_match Mon Jan 27 09:27:03 2014 -0500
@@ -0,0 +1,884 @@
+chr1 3002975 3002975 3002975 4 5 0\.\d+ 1\.000000
+chr1 3018775 3018775 3018775 4 7 0\.\d+ 1\.000000
+chr1 3021225 3021225 3021225 8 6 1\.\d+ 1\.000000
+chr1 3026925 3026925 3026925 4 2 1\.\d+ 1\.000000
+chr1 3035625 3035625 3035625 4 6 0\.\d+ 1\.000000
+chr1 3037175 3037175 3037175 4 5 0\.\d+ 1\.000000
+chr1 3038725 3038725 3038725 6 7 0\.\d+ 1\.000000
+chr1 3041075 3041075 3041075 4 2 1\.\d+ 1\.000000
+chr1 3054875 3054500 3055300 5 0 15\.\d+ 0\.193000
+chr1 3062525 3062250 3062900 4 0 12\.\d+ 0\.193000
+chr1 3063225 3063225 3063225 4 3 1\.\d+ 1\.000000
+chr1 3066125 3066125 3066125 4 6 0\.\d+ 1\.000000
+chr1 3071275 3071275 3071275 4 7 0\.\d+ 1\.000000
+chr1 3086425 3086425 3086425 11 15 0\.\d+ 1\.000000
+chr1 3089625 3089625 3089625 5 4 1\.\d+ 1\.000000
+chr1 3095475 3095475 3095475 7 8 0\.\d+ 1\.000000
+chr1 3104975 3104975 3104975 5 9 0\.\d+ 1\.000000
+chr1 3107075 3107075 3107075 6 8 0\.\d+ 1\.000000
+chr1 3108325 3108325 3108325 4 5 0\.\d+ 1\.000000
+chr1 3110425 3110425 3110425 10 2 4\.\d+ 1\.000000
+chr1 3111975 3111975 3111975 5 4 1\.\d+ 1\.000000
+chr1 3118025 3117750 3118550 4 0 12\.\d+ 0\.193000
+chr1 3119725 3119725 3119725 5 7 0\.\d+ 1\.000000
+chr1 3122475 3122475 3122475 5 6 0\.\d+ 1\.000000
+chr1 3124625 3124625 3124625 4 3 1\.\d+ 1\.000000
+chr1 3139075 3138350 3139350 5 0 15\.\d+ 0\.193000
+chr1 3156575 3156575 3156575 6 7 0\.\d+ 1\.000000
+chr1 3157575 3157575 3157575 5 2 2\.\d+ 1\.000000
+chr1 3161625 3161625 3161625 6 4 1\.\d+ 1\.000000
+chr1 3168825 3168825 3168825 6 8 0\.\d+ 1\.000000
+chr1 3173725 3173725 3173725 4 3 1\.\d+ 1\.000000
+chr1 3180775 3180775 3180775 5 4 1\.\d+ 1\.000000
+chr1 3187175 3187175 3187175 6 6 1\.\d+ 1\.000000
+chr1 3188725 3188725 3188725 8 9 0\.\d+ 1\.000000
+chr1 3192225 3192225 3192225 5 5 1\.\d+ 1\.000000
+chr1 3196025 3195750 3196350 4 0 12\.\d+ 0\.193000
+chr1 3201775 3201775 3201775 6 6 1\.\d+ 1\.000000
+chr1 3204725 3204725 3204725 4 3 1\.\d+ 1\.000000
+chr1 3207225 3207225 3207225 9 4 2\.\d+ 1\.000000
+chr1 3208925 3208925 3208925 8 3 2\.\d+ 1\.000000
+chr1 3210775 3210775 3210775 5 1 4\.\d+ 1\.000000
+chr1 3212525 3212525 3212525 6 3 1\.\d+ 1\.000000
+chr1 3213675 3213675 3213675 6 13 0\.\d+ 1\.000000
+chr1 3215275 3215275 3215275 4 4 1\.\d+ 1\.000000
+chr1 3218225 3217950 3218650 6 0 18\.\d+ 0\.193000
+chr1 3219225 3219225 3219225 8 4 2\.\d+ 1\.000000
+chr1 3237925 3237925 3237925 4 6 0\.\d+ 1\.000000
+chr1 3238975 3238975 3238975 5 4 1\.\d+ 1\.000000
+chr1 3239825 3239825 3239825 6 6 1\.\d+ 1\.000000
+chr1 3242375 3242375 3242375 6 12 0\.\d+ 1\.000000
+chr1 3243175 3243175 3243175 7 4 1\.\d+ 1\.000000
+chr1 3244675 3244675 3244675 5 5 1\.\d+ 1\.000000
+chr1 3246325 3246325 3246325 6 3 1\.\d+ 1\.000000
+chr1 3248375 3248375 3248375 5 2 2\.\d+ 1\.000000
+chr1 3255375 3255375 3255375 5 4 1\.\d+ 1\.000000
+chr1 3256175 3256175 3256175 6 3 1\.\d+ 1\.000000
+chr1 3257625 3257625 3257625 5 5 1\.\d+ 1\.000000
+chr1 3259775 3259775 3259775 4 4 1\.\d+ 1\.000000
+chr1 3274825 3274825 3274825 5 3 1\.\d+ 1\.000000
+chr1 3281275 3281275 3281275 8 3 2\.\d+ 1\.000000
+chr1 3288225 3288225 3288225 6 3 1\.\d+ 1\.000000
+chr1 3290775 3290775 3290775 4 3 1\.\d+ 1\.000000
+chr1 3292625 3292625 3292625 7 4 1\.\d+ 1\.000000
+chr1 3302575 3302575 3302575 5 4 1\.\d+ 1\.000000
+chr1 3309275 3309275 3309275 5 4 1\.\d+ 1\.000000
+chr1 3310775 3310775 3310775 6 8 0\.\d+ 1\.000000
+chr1 3312075 3312075 3312075 5 4 1\.\d+ 1\.000000
+chr1 3312925 3312925 3312925 5 13 0\.\d+ 1\.000000
+chr1 3314975 3314975 3314975 4 9 0\.\d+ 1\.000000
+chr1 3316675 3316675 3316675 4 5 0\.\d+ 1\.000000
+chr1 3317425 3317425 3317425 4 4 1\.\d+ 1\.000000
+chr1 3323275 3323275 3323275 4 3 1\.\d+ 1\.000000
+chr1 3324125 3324125 3324125 5 3 1\.\d+ 1\.000000
+chr1 3325075 3325075 3325075 7 10 0\.\d+ 1\.000000
+chr1 3346775 3346775 3346775 6 4 1\.\d+ 1\.000000
+chr1 3353075 3353075 3353075 8 10 0\.\d+ 1\.000000
+chr1 3354625 3354625 3354625 6 2 2\.\d+ 1\.000000
+chr1 3355875 3355875 3355875 8 9 0\.\d+ 1\.000000
+chr1 3357375 3357375 3357375 5 2 2\.\d+ 1\.000000
+chr1 3358275 3358275 3358275 6 6 1\.\d+ 1\.000000
+chr1 3359425 3359425 3359425 6 11 0\.\d+ 1\.000000
+chr1 3361575 3361575 3361575 7 6 1\.\d+ 1\.000000
+chr1 3365375 3365375 3365375 4 6 0\.\d+ 1\.000000
+chr1 3368825 3368825 3368825 4 3 1\.\d+ 1\.000000
+chr1 3370275 3370275 3370275 5 8 0\.\d+ 1\.000000
+chr1 3371375 3371375 3371375 6 6 1\.\d+ 1\.000000
+chr1 3373625 3373625 3373625 4 3 1\.\d+ 1\.000000
+chr1 3379625 3379625 3379625 4 6 0\.\d+ 1\.000000
+chr1 3383075 3383075 3383075 7 9 0\.\d+ 1\.000000
+chr1 3388625 3388625 3388625 6 9 0\.\d+ 1\.000000
+chr1 3390925 3390925 3390925 5 7 0\.\d+ 1\.000000
+chr1 3391925 3391925 3391925 4 5 0\.\d+ 1\.000000
+chr1 3395925 3395925 3395925 5 8 0\.\d+ 1\.000000
+chr1 3397525 3397525 3397525 4 4 1\.\d+ 1\.000000
+chr1 3400325 3400325 3400325 4 8 0\.\d+ 1\.000000
+chr1 3402375 3402375 3402375 9 12 0\.\d+ 1\.000000
+chr1 3404975 3404975 3404975 6 7 0\.\d+ 1\.000000
+chr1 3408175 3408175 3408175 5 6 0\.\d+ 1\.000000
+chr1 3409625 3409625 3409625 5 7 0\.\d+ 1\.000000
+chr1 3412375 3412375 3412375 4 4 1\.\d+ 1\.000000
+chr1 3413725 3413725 3413725 5 1 4\.\d+ 1\.000000
+chr1 3415525 3415525 3415525 8 4 2\.\d+ 1\.000000
+chr1 3418975 3418975 3418975 4 3 1\.\d+ 1\.000000
+chr1 3421775 3421775 3421775 4 5 0\.\d+ 1\.000000
+chr1 3422925 3422925 3422925 4 6 0\.\d+ 1\.000000
+chr1 3423725 3423725 3423725 4 4 1\.\d+ 1\.000000
+chr1 3425225 3425225 3425225 6 8 0\.\d+ 1\.000000
+chr1 3426425 3426425 3426425 4 8 0\.\d+ 1\.000000
+chr1 3430425 3430425 3430425 4 6 0\.\d+ 1\.000000
+chr1 3435975 3435975 3435975 5 6 0\.\d+ 1\.000000
+chr1 3436825 3436825 3436825 4 1 3\.\d+ 1\.000000
+chr1 3439675 3439675 3439675 11 5 2\.\d+ 1\.000000
+chr1 3441125 3441125 3441125 6 6 1\.\d+ 1\.000000
+chr1 3452475 3452475 3452475 6 3 1\.\d+ 1\.000000
+chr1 3454725 3454725 3454725 9 8 1\.\d+ 1\.000000
+chr1 3458825 3458825 3458825 9 2 4\.\d+ 1\.000000
+chr1 3461075 3461075 3461075 7 7 1\.\d+ 1\.000000
+chr1 3462625 3462250 3463300 8 1 6\.\d+ 1\.000000
+chr1 3466275 3466275 3466275 4 7 0\.\d+ 1\.000000
+chr1 3472425 3472425 3472425 4 1 3\.\d+ 1\.000000
+chr1 3474925 3474925 3474925 5 5 1\.\d+ 1\.000000
+chr1 3478075 3478075 3478075 6 5 1\.\d+ 1\.000000
+chr1 3479375 3479375 3479375 4 2 1\.\d+ 1\.000000
+chr1 3484475 3484475 3484475 8 4 2\.\d+ 1\.000000
+chr1 3487075 3487075 3487075 4 10 0\.\d+ 1\.000000
+chr1 3489175 3489175 3489175 6 6 1\.\d+ 1\.000000
+chr1 3489975 3489975 3489975 5 9 0\.\d+ 1\.000000
+chr1 3495075 3495075 3495075 5 4 1\.\d+ 1\.000000
+chr1 3499625 3499625 3499625 8 9 0\.\d+ 1\.000000
+chr1 3504975 3504975 3504975 4 6 0\.\d+ 1\.000000
+chr1 3506375 3506375 3506375 8 7 1\.\d+ 1\.000000
+chr1 3507625 3507625 3507625 9 6 1\.\d+ 1\.000000
+chr1 3509475 3509475 3509475 9 7 1\.\d+ 1\.000000
+chr1 3514575 3514575 3514575 4 9 0\.\d+ 1\.000000
+chr1 3515375 3515375 3515375 4 3 1\.\d+ 1\.000000
+chr1 3518775 3518775 3518775 4 2 1\.\d+ 1\.000000
+chr1 3529775 3529775 3529775 6 3 1\.\d+ 1\.000000
+chr1 3532075 3532075 3532075 6 4 1\.\d+ 1\.000000
+chr1 3534725 3534725 3534725 7 5 1\.\d+ 1\.000000
+chr1 3536025 3536025 3536025 5 4 1\.\d+ 1\.000000
+chr1 3536975 3536975 3536975 7 11 0\.\d+ 1\.000000
+chr1 3540425 3540425 3540425 5 7 0\.\d+ 1\.000000
+chr1 3542925 3542925 3542925 4 6 0\.\d+ 1\.000000
+chr1 3544025 3544025 3544025 6 7 0\.\d+ 1\.000000
+chr1 3545075 3545075 3545075 7 7 1\.\d+ 1\.000000
+chr1 3546275 3546275 3546275 5 5 1\.\d+ 1\.000000
+chr1 3550875 3550875 3550875 5 4 1\.\d+ 1\.000000
+chr1 3552025 3552025 3552025 5 8 0\.\d+ 1\.000000
+chr1 3559825 3559550 3560150 7 1 5\.\d+ 1\.000000
+chr1 3561475 3561475 3561475 4 5 0\.\d+ 1\.000000
+chr1 3563025 3563025 3563025 7 5 1\.\d+ 1\.000000
+chr1 3565325 3565325 3565325 5 3 1\.\d+ 1\.000000
+chr1 3566525 3566525 3566525 5 3 1\.\d+ 1\.000000
+chr1 3567375 3567375 3567375 4 3 1\.\d+ 1\.000000
+chr1 3568675 3568675 3568675 4 4 1\.\d+ 1\.000000
+chr1 3570975 3570975 3570975 6 7 0\.\d+ 1\.000000
+chr1 3572225 3572225 3572225 6 8 0\.\d+ 1\.000000
+chr1 3573125 3573125 3573125 6 5 1\.\d+ 1\.000000
+chr1 3574175 3574175 3574175 9 6 1\.\d+ 1\.000000
+chr1 3574825 3574825 3574825 8 2 3\.\d+ 1\.000000
+chr1 3577325 3577325 3577325 6 1 4\.\d+ 1\.000000
+chr1 3581825 3581825 3581825 4 5 0\.\d+ 1\.000000
+chr1 3583175 3583175 3583175 6 3 1\.\d+ 1\.000000
+chr1 3585225 3585225 3585225 5 8 0\.\d+ 1\.000000
+chr1 3586475 3586475 3586475 5 11 0\.\d+ 1\.000000
+chr1 3587275 3587275 3587275 5 4 1\.\d+ 1\.000000
+chr1 3589175 3589175 3589175 5 2 2\.\d+ 1\.000000
+chr1 3593025 3593025 3593025 4 5 0\.\d+ 1\.000000
+chr1 3594125 3594125 3594125 6 3 1\.\d+ 1\.000000
+chr1 3596275 3596275 3596275 4 9 0\.\d+ 1\.000000
+chr1 3599125 3599125 3599125 4 3 1\.\d+ 1\.000000
+chr1 3601375 3601375 3601375 5 4 1\.\d+ 1\.000000
+chr1 3602675 3602675 3602675 6 6 1\.\d+ 1\.000000
+chr1 3621275 3621275 3621275 8 11 0\.\d+ 1\.000000
+chr1 3622775 3622775 3622775 5 3 1\.\d+ 1\.000000
+chr1 3625975 3625975 3625975 5 5 1\.\d+ 1\.000000
+chr1 3628175 3628175 3628175 6 7 0\.\d+ 1\.000000
+chr1 3629475 3629475 3629475 4 3 1\.\d+ 1\.000000
+chr1 3632275 3632275 3632275 6 7 0\.\d+ 1\.000000
+chr1 3633525 3633525 3633525 11 5 2\.\d+ 1\.000000
+chr1 3636525 3636525 3636525 8 8 1\.\d+ 1\.000000
+chr1 3637925 3637925 3637925 4 3 1\.\d+ 1\.000000
+chr1 3639225 3639225 3639225 4 8 0\.\d+ 1\.000000
+chr1 3640825 3640825 3640825 5 11 0\.\d+ 1\.000000
+chr1 3642775 3642775 3642775 8 9 0\.\d+ 1\.000000
+chr1 3648925 3648925 3648925 4 1 3\.\d+ 1\.000000
+chr1 3650075 3650075 3650075 5 8 0\.\d+ 1\.000000
+chr1 3651475 3651475 3651475 4 3 1\.\d+ 1\.000000
+chr1 3653175 3653175 3653175 4 3 1\.\d+ 1\.000000
+chr1 3654175 3654175 3654175 5 4 1\.\d+ 1\.000000
+chr1 3656075 3656075 3656075 4 3 1\.\d+ 1\.000000
+chr1 3658425 3658425 3658425 5 7 0\.\d+ 1\.000000
+chr1 3660425 3660425 3660425 5 8 0\.\d+ 1\.000000
+chr1 3661925 3661925 3661925 9 5 1\.\d+ 1\.000000
+chr1 3663775 3663775 3663775 4 4 1\.\d+ 1\.000000
+chr1 3666125 3666125 3666125 5 2 2\.\d+ 1\.000000
+chr1 3671725 3671725 3671725 4 3 1\.\d+ 1\.000000
+chr1 3672875 3672875 3672875 4 3 1\.\d+ 1\.000000
+chr1 3677375 3677100 3677700 7 1 5\.\d+ 1\.000000
+chr1 3680575 3680575 3680575 7 7 1\.\d+ 1\.000000
+chr1 3683375 3683375 3683375 7 3 2\.\d+ 1\.000000
+chr1 3698525 3698525 3698525 6 3 1\.\d+ 1\.000000
+chr1 3702175 3702175 3702175 5 7 0\.\d+ 1\.000000
+chr1 3703975 3703975 3703975 6 6 1\.\d+ 1\.000000
+chr1 3706375 3706375 3706375 5 4 1\.\d+ 1\.000000
+chr1 3712225 3712225 3712225 7 3 2\.\d+ 1\.000000
+chr1 3714275 3714275 3714275 5 6 0\.\d+ 1\.000000
+chr1 3715125 3715125 3715125 4 4 1\.\d+ 1\.000000
+chr1 3717425 3717425 3717425 4 3 1\.\d+ 1\.000000
+chr1 3720175 3720175 3720175 5 7 0\.\d+ 1\.000000
+chr1 3721575 3721575 3721575 6 3 1\.\d+ 1\.000000
+chr1 3723275 3723275 3723275 5 6 0\.\d+ 1\.000000
+chr1 3733125 3733125 3733125 6 6 1\.\d+ 1\.000000
+chr1 3737375 3737375 3737375 5 2 2\.\d+ 1\.000000
+chr1 3742975 3742975 3742975 4 4 1\.\d+ 1\.000000
+chr1 3744475 3744475 3744475 6 9 0\.\d+ 1\.000000
+chr1 3745425 3745425 3745425 4 4 1\.\d+ 1\.000000
+chr1 3748275 3748275 3748275 8 7 1\.\d+ 1\.000000
+chr1 3750175 3750175 3750175 7 7 1\.\d+ 1\.000000
+chr1 3751525 3751525 3751525 4 6 0\.\d+ 1\.000000
+chr1 3755275 3755275 3755275 4 4 1\.\d+ 1\.000000
+chr1 3763775 3763775 3763775 4 4 1\.\d+ 1\.000000
+chr1 3764625 3764625 3764625 4 2 1\.\d+ 1\.000000
+chr1 3768675 3768675 3768675 4 3 1\.\d+ 1\.000000
+chr1 3771975 3771975 3771975 6 5 1\.\d+ 1\.000000
+chr1 3776325 3776325 3776325 6 4 1\.\d+ 1\.000000
+chr1 3777775 3777775 3777775 5 1 4\.\d+ 1\.000000
+chr1 3778775 3778775 3778775 7 3 2\.\d+ 1\.000000
+chr1 3779925 3779925 3779925 6 9 0\.\d+ 1\.000000
+chr1 3781925 3781925 3781925 6 6 1\.\d+ 1\.000000
+chr1 3784375 3784375 3784375 7 2 3\.\d+ 1\.000000
+chr1 3785825 3785825 3785825 5 8 0\.\d+ 1\.000000
+chr1 3786925 3786925 3786925 4 8 0\.\d+ 1\.000000
+chr1 3788625 3788625 3788625 4 4 1\.\d+ 1\.000000
+chr1 3789475 3789475 3789475 4 2 1\.\d+ 1\.000000
+chr1 3803325 3803325 3803325 5 8 0\.\d+ 1\.000000
+chr1 3804375 3804375 3804375 7 7 1\.\d+ 1\.000000
+chr1 3805275 3805275 3805275 4 1 3\.\d+ 1\.000000
+chr1 3813675 3813675 3813675 4 5 0\.\d+ 1\.000000
+chr1 3823825 3823825 3823825 7 4 1\.\d+ 1\.000000
+chr1 3826875 3826875 3826875 5 5 1\.\d+ 1\.000000
+chr1 3829025 3829025 3829025 5 5 1\.\d+ 1\.000000
+chr1 3832625 3831950 3833100 5 0 15\.\d+ 0\.193000
+chr1 3833625 3833625 3833625 4 3 1\.\d+ 1\.000000
+chr1 3847575 3847575 3847575 4 7 0\.\d+ 1\.000000
+chr1 3850575 3850575 3850575 5 3 1\.\d+ 1\.000000
+chr1 3852575 3852575 3852575 4 3 1\.\d+ 1\.000000
+chr1 3855575 3855575 3855575 5 6 0\.\d+ 1\.000000
+chr1 3857625 3857625 3857625 7 7 1\.\d+ 1\.000000
+chr1 3858575 3858575 3858575 7 3 2\.\d+ 1\.000000
+chr1 3864625 3864625 3864625 4 5 0\.\d+ 1\.000000
+chr1 3870125 3870125 3870125 4 2 1\.\d+ 1\.000000
+chr1 3884825 3884825 3884825 5 1 4\.\d+ 1\.000000
+chr1 3889925 3889925 3889925 4 5 0\.\d+ 1\.000000
+chr1 3892125 3892125 3892125 8 7 1\.\d+ 1\.000000
+chr1 3895825 3895825 3895825 7 8 0\.\d+ 1\.000000
+chr1 3897225 3897225 3897225 6 7 0\.\d+ 1\.000000
+chr1 3900725 3900725 3900725 5 6 0\.\d+ 1\.000000
+chr1 3902625 3902625 3902625 6 10 0\.\d+ 1\.000000
+chr1 3904225 3904225 3904225 11 9 1\.\d+ 1\.000000
+chr1 3905225 3905225 3905225 8 2 3\.\d+ 1\.000000
+chr1 3907075 3907075 3907075 6 4 1\.\d+ 1\.000000
+chr1 3908425 3908425 3908425 5 9 0\.\d+ 1\.000000
+chr1 3912525 3912525 3912525 4 4 1\.\d+ 1\.000000
+chr1 3916725 3916725 3916725 4 2 1\.\d+ 1\.000000
+chr1 3919125 3919125 3919125 4 9 0\.\d+ 1\.000000
+chr1 3920525 3920525 3920525 4 1 3\.\d+ 1\.000000
+chr1 3922575 3922575 3922575 5 8 0\.\d+ 1\.000000
+chr1 3924025 3924025 3924025 4 8 0\.\d+ 1\.000000
+chr1 3926075 3926075 3926075 7 7 1\.\d+ 1\.000000
+chr1 3929475 3929475 3929475 5 2 2\.\d+ 1\.000000
+chr1 3931525 3931525 3931525 9 9 1\.\d+ 1\.000000
+chr1 3933125 3933125 3933125 4 5 0\.\d+ 1\.000000
+chr1 3935325 3935325 3935325 6 2 2\.\d+ 1\.000000
+chr1 3941725 3941725 3941725 7 8 0\.\d+ 1\.000000
+chr1 3943325 3943325 3943325 5 5 1\.\d+ 1\.000000
+chr1 3946225 3946225 3946225 4 2 1\.\d+ 1\.000000
+chr1 3947575 3947575 3947575 5 2 2\.\d+ 1\.000000
+chr1 3959925 3959925 3959925 7 4 1\.\d+ 1\.000000
+chr1 3962175 3962175 3962175 5 2 2\.\d+ 1\.000000
+chr1 3963125 3963125 3963125 5 7 0\.\d+ 1\.000000
+chr1 3964275 3964275 3964275 5 1 4\.\d+ 1\.000000
+chr1 3980975 3980975 3980975 4 4 1\.\d+ 1\.000000
+chr1 3983775 3983775 3983775 9 5 1\.\d+ 1\.000000
+chr1 3984775 3984775 3984775 4 4 1\.\d+ 1\.000000
+chr1 3988375 3988375 3988375 4 7 0\.\d+ 1\.000000
+chr1 3998125 3998125 3998125 4 9 0\.\d+ 1\.000000
+chr1 4000825 4000825 4000825 6 1 4\.\d+ 1\.000000
+chr1 4002725 4002725 4002725 4 5 0\.\d+ 1\.000000
+chr1 4006825 4006825 4006825 10 10 1\.\d+ 1\.000000
+chr1 4008275 4008275 4008275 7 6 1\.\d+ 1\.000000
+chr1 4016275 4016275 4016275 5 8 0\.\d+ 1\.000000
+chr1 4020825 4020825 4020825 7 5 1\.\d+ 1\.000000
+chr1 4022975 4022975 4022975 4 6 0\.\d+ 1\.000000
+chr1 4024525 4024525 4024525 5 6 0\.\d+ 1\.000000
+chr1 4027125 4027125 4027125 7 7 1\.\d+ 1\.000000
+chr1 4036625 4036625 4036625 4 6 0\.\d+ 1\.000000
+chr1 4039475 4039475 4039475 4 4 1\.\d+ 1\.000000
+chr1 4046275 4046275 4046275 7 8 0\.\d+ 1\.000000
+chr1 4047575 4047575 4047575 7 9 0\.\d+ 1\.000000
+chr1 4049025 4049025 4049025 5 9 0\.\d+ 1\.000000
+chr1 4050075 4050075 4050075 6 2 2\.\d+ 1\.000000
+chr1 4054625 4054625 4054625 4 5 0\.\d+ 1\.000000
+chr1 4058475 4058475 4058475 4 3 1\.\d+ 1\.000000
+chr1 4059775 4059775 4059775 6 7 0\.\d+ 1\.000000
+chr1 4068675 4068675 4068675 4 2 1\.\d+ 1\.000000
+chr1 4077975 4077975 4077975 5 3 1\.\d+ 1\.000000
+chr1 4078925 4078925 4078925 4 2 1\.\d+ 1\.000000
+chr1 4080725 4080725 4080725 6 4 1\.\d+ 1\.000000
+chr1 4085175 4085175 4085175 4 5 0\.\d+ 1\.000000
+chr1 4086275 4086275 4086275 6 3 1\.\d+ 1\.000000
+chr1 4087325 4087325 4087325 7 6 1\.\d+ 1\.000000
+chr1 4088475 4088475 4088475 6 6 1\.\d+ 1\.000000
+chr1 4089775 4089775 4089775 6 6 1\.\d+ 1\.000000
+chr1 4092425 4091800 4092950 5 0 15\.\d+ 0\.193000
+chr1 4094775 4094775 4094775 4 6 0\.\d+ 1\.000000
+chr1 4095725 4095725 4095725 4 9 0\.\d+ 1\.000000
+chr1 4102775 4102775 4102775 5 2 2\.\d+ 1\.000000
+chr1 4104275 4104275 4104275 5 8 0\.\d+ 1\.000000
+chr1 4105675 4105675 4105675 5 4 1\.\d+ 1\.000000
+chr1 4106675 4106675 4106675 7 9 0\.\d+ 1\.000000
+chr1 4111325 4111325 4111325 4 1 3\.\d+ 1\.000000
+chr1 4113375 4113375 4113375 5 4 1\.\d+ 1\.000000
+chr1 4115575 4115575 4115575 8 8 1\.\d+ 1\.000000
+chr1 4118175 4118175 4118175 5 2 2\.\d+ 1\.000000
+chr1 4125825 4125825 4125825 5 8 0\.\d+ 1\.000000
+chr1 4128725 4128725 4128725 12 8 1\.\d+ 1\.000000
+chr1 4130575 4130575 4130575 10 9 1\.\d+ 1\.000000
+chr1 4131375 4131375 4131375 9 3 2\.\d+ 1\.000000
+chr1 4132275 4132275 4132275 7 6 1\.\d+ 1\.000000
+chr1 4134175 4134175 4134175 24 5 4\.\d+ 1\.000000
+chr1 4138975 4138975 4138975 4 5 0\.\d+ 1\.000000
+chr1 4141325 4141325 4141325 6 6 1\.\d+ 1\.000000
+chr1 4147075 4147075 4147075 4 2 1\.\d+ 1\.000000
+chr1 4155075 4155075 4155075 5 3 1\.\d+ 1\.000000
+chr1 4156925 4156925 4156925 5 5 1\.\d+ 1\.000000
+chr1 4158125 4158125 4158125 4 3 1\.\d+ 1\.000000
+chr1 4160825 4160825 4160825 5 5 1\.\d+ 1\.000000
+chr1 4161575 4161575 4161575 4 5 0\.\d+ 1\.000000
+chr1 4165275 4165275 4165275 4 4 1\.\d+ 1\.000000
+chr1 4176475 4176475 4176475 5 5 1\.\d+ 1\.000000
+chr1 4178375 4178375 4178375 4 2 1\.\d+ 1\.000000
+chr1 4185675 4185675 4185675 5 9 0\.\d+ 1\.000000
+chr1 4187675 4187675 4187675 6 2 2\.\d+ 1\.000000
+chr1 4189025 4189025 4189025 5 3 1\.\d+ 1\.000000
+chr1 4192875 4192875 4192875 5 2 2\.\d+ 1\.000000
+chr1 4196375 4196375 4196375 5 4 1\.\d+ 1\.000000
+chr1 4197175 4197175 4197175 8 8 1\.\d+ 1\.000000
+chr1 4200325 4200325 4200325 4 6 0\.\d+ 1\.000000
+chr1 4213525 4213525 4213525 7 6 1\.\d+ 1\.000000
+chr1 4216275 4216275 4216275 6 4 1\.\d+ 1\.000000
+chr1 4217925 4217925 4217925 7 6 1\.\d+ 1\.000000
+chr1 4219775 4219775 4219775 9 3 2\.\d+ 1\.000000
+chr1 4234475 4234475 4234475 5 5 1\.\d+ 1\.000000
+chr1 4236025 4236025 4236025 8 11 0\.\d+ 1\.000000
+chr1 4237225 4237225 4237225 4 5 0\.\d+ 1\.000000
+chr1 4247375 4247100 4247650 11 2 5\.\d+ 1\.000000
+chr1 4250325 4250325 4250325 7 8 0\.\d+ 1\.000000
+chr1 4251325 4251325 4251325 10 6 1\.\d+ 1\.000000
+chr1 4259225 4259225 4259225 4 5 0\.\d+ 1\.000000
+chr1 4260025 4260025 4260025 4 6 0\.\d+ 1\.000000
+chr1 4264275 4264275 4264275 4 3 1\.\d+ 1\.000000
+chr1 4266325 4266325 4266325 4 6 0\.\d+ 1\.000000
+chr1 4268125 4268125 4268125 6 5 1\.\d+ 1\.000000
+chr1 4269575 4269575 4269575 5 5 1\.\d+ 1\.000000
+chr1 4272225 4272225 4272225 7 7 1\.\d+ 1\.000000
+chr1 4278925 4278925 4278925 6 1 4\.\d+ 1\.000000
+chr1 4281125 4281125 4281125 6 4 1\.\d+ 1\.000000
+chr1 4290775 4290775 4290775 4 3 1\.\d+ 1\.000000
+chr1 4293275 4293275 4293275 6 8 0\.\d+ 1\.000000
+chr1 4295575 4295575 4295575 5 3 1\.\d+ 1\.000000
+chr1 4300875 4300875 4300875 5 1 4\.\d+ 1\.000000
+chr1 4307025 4307025 4307025 5 3 1\.\d+ 1\.000000
+chr1 4308275 4308275 4308275 4 6 0\.\d+ 1\.000000
+chr1 4309125 4309125 4309125 5 3 1\.\d+ 1\.000000
+chr1 4318375 4318375 4318375 7 9 0\.\d+ 1\.000000
+chr1 4320275 4320275 4320275 4 3 1\.\d+ 1\.000000
+chr1 4323875 4323250 4324550 47 4 11\.\d+ 1\.000000
+chr1 4326275 4326275 4326275 7 8 0\.\d+ 1\.000000
+chr1 4337575 4337150 4338250 54 2 25\.\d+ 0\.193000
+chr1 4340525 4340525 4340525 7 10 0\.\d+ 1\.000000
+chr1 4342075 4342075 4342075 5 4 1\.\d+ 1\.000000
+chr1 4343625 4343625 4343625 10 9 1\.\d+ 1\.000000
+chr1 4346125 4346125 4346125 10 10 1\.\d+ 1\.000000
+chr1 4347825 4347825 4347825 4 2 1\.\d+ 1\.000000
+chr1 4349225 4349225 4349225 5 7 0\.\d+ 1\.000000
+chr1 4350525 4350525 4350525 6 8 0\.\d+ 1\.000000
+chr1 4353825 4353825 4353825 6 7 0\.\d+ 1\.000000
+chr1 4355875 4355875 4355875 5 8 0\.\d+ 1\.000000
+chr1 4356925 4356925 4356925 6 8 0\.\d+ 1\.000000
+chr1 4360525 4360525 4360525 8 12 0\.\d+ 1\.000000
+chr1 4362225 4362225 4362225 5 9 0\.\d+ 1\.000000
+chr1 4363575 4363575 4363575 6 7 0\.\d+ 1\.000000
+chr1 4374925 4374925 4374925 13 13 1\.\d+ 1\.000000
+chr1 4376575 4376575 4376575 9 5 1\.\d+ 1\.000000
+chr1 4381525 4381525 4381525 4 5 0\.\d+ 1\.000000
+chr1 4384975 4384975 4384975 4 7 0\.\d+ 1\.000000
+chr1 4393775 4393775 4393775 4 1 3\.\d+ 1\.000000
+chr1 4395725 4395725 4395725 7 6 1\.\d+ 1\.000000
+chr1 4397325 4397325 4397325 8 9 0\.\d+ 1\.000000
+chr1 4400425 4400425 4400425 9 9 1\.\d+ 1\.000000
+chr1 4402525 4402525 4402525 5 5 1\.\d+ 1\.000000
+chr1 4403675 4403675 4403675 6 8 0\.\d+ 1\.000000
+chr1 4406425 4406425 4406425 8 11 0\.\d+ 1\.000000
+chr1 4408225 4407650 4408750 81 5 16\.\d+ 0\.193000
+chr1 4410975 4410975 4410975 6 7 0\.\d+ 1\.000000
+chr1 4412175 4412175 4412175 7 5 1\.\d+ 1\.000000
+chr1 4413675 4413675 4413675 12 9 1\.\d+ 1\.000000
+chr1 4415175 4415175 4415175 7 6 1\.\d+ 1\.000000
+chr1 4417025 4417025 4417025 9 10 0\.\d+ 1\.000000
+chr1 4418575 4418575 4418575 6 6 1\.\d+ 1\.000000
+chr1 4423975 4423975 4423975 6 6 1\.\d+ 1\.000000
+chr1 4426025 4426025 4426025 9 11 0\.\d+ 1\.000000
+chr1 4442075 4442075 4442075 7 5 1\.\d+ 1\.000000
+chr1 4443825 4443825 4443825 8 2 3\.\d+ 1\.000000
+chr1 4445875 4445875 4445875 7 6 1\.\d+ 1\.000000
+chr1 4447825 4447825 4447825 8 8 1\.\d+ 1\.000000
+chr1 4448825 4448825 4448825 6 4 1\.\d+ 1\.000000
+chr1 4449875 4449875 4449875 10 9 1\.\d+ 1\.000000
+chr1 4451275 4451275 4451275 5 5 1\.\d+ 1\.000000
+chr1 4453325 4453325 4453325 4 5 0\.\d+ 1\.000000
+chr1 4454175 4454175 4454175 6 11 0\.\d+ 1\.000000
+chr1 4457925 4457925 4457925 4 4 1\.\d+ 1\.000000
+chr1 4460575 4460575 4460575 7 6 1\.\d+ 1\.000000
+chr1 4462325 4462325 4462325 7 5 1\.\d+ 1\.000000
+chr1 4463025 4463025 4463025 9 8 1\.\d+ 1\.000000
+chr1 4465525 4465525 4465525 8 6 1\.\d+ 1\.000000
+chr1 4467875 4467875 4467875 5 2 2\.\d+ 1\.000000
+chr1 4471275 4471275 4471275 5 1 4\.\d+ 1\.000000
+chr1 4473275 4473275 4473275 7 7 1\.\d+ 1\.000000
+chr1 4474375 4474375 4474375 5 4 1\.\d+ 1\.000000
+chr1 4479275 4479275 4479275 6 9 0\.\d+ 1\.000000
+chr1 4480525 4480525 4480525 6 11 0\.\d+ 1\.000000
+chr1 4481875 4481875 4481875 7 5 1\.\d+ 1\.000000
+chr1 4484725 4484725 4484725 5 2 2\.\d+ 1\.000000
+chr1 4485725 4485725 4485725 12 3 3\.\d+ 1\.000000
+chr1 4487725 4487725 4487725 9 4 2\.\d+ 1\.000000
+chr1 4489375 4489375 4489375 7 7 1\.\d+ 1\.000000
+chr1 4491925 4491925 4491925 5 3 1\.\d+ 1\.000000
+chr1 4493825 4493825 4493825 9 14 0\.\d+ 1\.000000
+chr1 4495175 4495175 4495175 6 4 1\.\d+ 1\.000000
+chr1 4496725 4496725 4496725 9 4 2\.\d+ 1\.000000
+chr1 4498825 4498825 4498825 9 5 1\.\d+ 1\.000000
+chr1 4500425 4500425 4500425 4 3 1\.\d+ 1\.000000
+chr1 4501475 4501475 4501475 5 6 0\.\d+ 1\.000000
+chr1 4505575 4505575 4505575 7 5 1\.\d+ 1\.000000
+chr1 4508175 4507350 4508650 41 2 19\.\d+ 0\.193000
+chr1 4509475 4509475 4509475 7 16 0\.\d+ 1\.000000
+chr1 4510625 4510625 4510625 12 4 3\.\d+ 1\.000000
+chr1 4512925 4512925 4512925 5 11 0\.\d+ 1\.000000
+chr1 4514425 4514425 4514425 4 4 1\.\d+ 1\.000000
+chr1 4516225 4516225 4516225 6 5 1\.\d+ 1\.000000
+chr1 4518725 4518725 4518725 6 5 1\.\d+ 1\.000000
+chr1 4521525 4521525 4521525 4 10 0\.\d+ 1\.000000
+chr1 4524175 4524175 4524175 10 7 1\.\d+ 1\.000000
+chr1 4525125 4525125 4525125 4 10 0\.\d+ 1\.000000
+chr1 4526325 4526325 4526325 10 4 2\.\d+ 1\.000000
+chr1 4527225 4527225 4527225 10 3 3\.\d+ 1\.000000
+chr1 4528975 4528975 4528975 9 9 1\.\d+ 1\.000000
+chr1 4532475 4532475 4532475 6 10 0\.\d+ 1\.000000
+chr1 4534325 4534325 4534325 7 9 0\.\d+ 1\.000000
+chr1 4535625 4535625 4535625 11 4 2\.\d+ 1\.000000
+chr1 4537275 4537275 4537275 7 9 0\.\d+ 1\.000000
+chr1 4538525 4538525 4538525 10 4 2\.\d+ 1\.000000
+chr1 4540975 4540975 4540975 5 6 0\.\d+ 1\.000000
+chr1 4542925 4542925 4542925 5 3 1\.\d+ 1\.000000
+chr1 4545775 4545775 4545775 4 4 1\.\d+ 1\.000000
+chr1 4560275 4560275 4560275 6 2 2\.\d+ 1\.000000
+chr1 4561925 4561925 4561925 6 4 1\.\d+ 1\.000000
+chr1 4562825 4562825 4562825 7 3 2\.\d+ 1\.000000
+chr1 4564875 4564875 4564875 5 3 1\.\d+ 1\.000000
+chr1 4566625 4566625 4566625 9 12 0\.\d+ 1\.000000
+chr1 4568075 4568075 4568075 5 3 1\.\d+ 1\.000000
+chr1 4569175 4569175 4569175 7 15 0\.\d+ 1\.000000
+chr1 4571225 4571225 4571225 12 8 1\.\d+ 1\.000000
+chr1 4574325 4574325 4574325 5 4 1\.\d+ 1\.000000
+chr1 4576675 4576675 4576675 4 4 1\.\d+ 1\.000000
+chr1 4577675 4577675 4577675 6 11 0\.\d+ 1\.000000
+chr1 4578925 4578925 4578925 6 8 0\.\d+ 1\.000000
+chr1 4580325 4580325 4580325 4 4 1\.\d+ 1\.000000
+chr1 4582325 4582325 4582325 5 9 0\.\d+ 1\.000000
+chr1 4583625 4583625 4583625 7 2 3\.\d+ 1\.000000
+chr1 4585425 4585425 4585425 5 3 1\.\d+ 1\.000000
+chr1 4586775 4586775 4586775 4 5 0\.\d+ 1\.000000
+chr1 4587975 4587975 4587975 4 5 0\.\d+ 1\.000000
+chr1 4589025 4589025 4589025 6 7 0\.\d+ 1\.000000
+chr1 4589925 4589925 4589925 8 11 0\.\d+ 1\.000000
+chr1 4592175 4592175 4592175 7 9 0\.\d+ 1\.000000
+chr1 4593625 4593625 4593625 9 7 1\.\d+ 1\.000000
+chr1 4595525 4595525 4595525 12 8 1\.\d+ 1\.000000
+chr1 4597275 4597275 4597275 4 14 0\.\d+ 1\.000000
+chr1 4600075 4600075 4600075 6 7 0\.\d+ 1\.000000
+chr1 4604075 4604075 4604075 4 3 1\.\d+ 1\.000000
+chr1 4604975 4604975 4604975 6 7 0\.\d+ 1\.000000
+chr1 4607425 4607425 4607425 7 10 0\.\d+ 1\.000000
+chr1 4608875 4608875 4608875 7 7 1\.\d+ 1\.000000
+chr1 4610275 4610275 4610275 6 11 0\.\d+ 1\.000000
+chr1 4611375 4611375 4611375 5 3 1\.\d+ 1\.000000
+chr1 4613325 4613325 4613325 6 5 1\.\d+ 1\.000000
+chr1 4615525 4615525 4615525 5 10 0\.\d+ 1\.000000
+chr1 4617175 4617175 4617175 6 6 1\.\d+ 1\.000000
+chr1 4619175 4619175 4619175 7 6 1\.\d+ 1\.000000
+chr1 4622175 4622175 4622175 5 5 1\.\d+ 1\.000000
+chr1 4629425 4629150 4629700 9 1 7\.\d+ 1\.000000
+chr1 4630825 4630825 4630825 6 9 0\.\d+ 1\.000000
+chr1 4631775 4631775 4631775 7 4 1\.\d+ 1\.000000
+chr1 4635325 4635325 4635325 7 6 1\.\d+ 1\.000000
+chr1 4637875 4637875 4637875 8 4 2\.\d+ 1\.000000
+chr1 4638975 4638975 4638975 6 6 1\.\d+ 1\.000000
+chr1 4641875 4641875 4641875 6 7 0\.\d+ 1\.000000
+chr1 4644125 4644125 4644125 6 5 1\.\d+ 1\.000000
+chr1 4645825 4645825 4645825 6 5 1\.\d+ 1\.000000
+chr1 4646875 4646875 4646875 6 12 0\.\d+ 1\.000000
+chr1 4647725 4647725 4647725 4 7 0\.\d+ 1\.000000
+chr1 4652325 4652325 4652325 5 4 1\.\d+ 1\.000000
+chr1 4658275 4658275 4658275 6 6 1\.\d+ 1\.000000
+chr1 4660225 4660225 4660225 7 4 1\.\d+ 1\.000000
+chr1 4661325 4661325 4661325 4 5 0\.\d+ 1\.000000
+chr1 4662075 4662075 4662075 5 2 2\.\d+ 1\.000000
+chr1 4663075 4662250 4664800 9 0 28\.\d+ 0\.189000
+chr1 4666125 4665400 4667400 9 0 28\.\d+ 0\.189000
+chr1 4668925 4668300 4670850 5 0 15\.\d+ 0\.193000
+chr1 4670175 4668300 4670850 6 0 18\.\d+ 0\.193000
+chr1 4674175 4673500 4675550 5 0 15\.\d+ 0\.193000
+chr1 4678925 4678250 4679650 6 0 18\.\d+ 0\.193000
+chr1 4680375 4679750 4684100 4 0 12\.\d+ 0\.193000
+chr1 4681775 4679750 4684100 5 0 15\.\d+ 0\.193000
+chr1 4687675 4687200 4694150 5 0 15\.\d+ 0\.193000
+chr1 4688525 4687200 4694150 7 0 21\.\d+ 0\.193000
+chr1 4689325 4687200 4694150 6 0 18\.\d+ 0\.193000
+chr1 4691975 4687200 4694150 8 0 24\.\d+ 0\.193000
+chr1 4693475 4687200 4694150 6 0 18\.\d+ 0\.193000
+chr1 4694975 4694250 4697100 5 0 15\.\d+ 0\.193000
+chr1 4696225 4694250 4697100 7 0 21\.\d+ 0\.193000
+chr1 4697725 4697150 4699850 6 0 18\.\d+ 0\.193000
+chr1 4699075 4697150 4699850 5 0 15\.\d+ 0\.193000
+chr1 4709675 4708050 4718500 5 0 15\.\d+ 0\.193000
+chr1 4710975 4708050 4718500 5 0 15\.\d+ 0\.193000
+chr1 4712925 4708050 4718500 9 0 28\.\d+ 0\.189000
+chr1 4714325 4708050 4718500 8 0 24\.\d+ 0\.193000
+chr1 4716525 4708050 4718500 10 0 31\.\d+ 0\.189000
+chr1 4718025 4708050 4718500 6 0 18\.\d+ 0\.193000
+chr1 4726475 4725950 4728150 4 0 12\.\d+ 0\.193000
+chr1 4727375 4725950 4728150 5 0 15\.\d+ 0\.193000
+chr1 4729725 4728950 4732850 4 0 12\.\d+ 0\.193000
+chr1 4730925 4728950 4732850 5 0 15\.\d+ 0\.193000
+chr1 4732075 4728950 4732850 9 0 28\.\d+ 0\.189000
+chr1 4734375 4733200 4746750 7 0 21\.\d+ 0\.193000
+chr1 4735825 4733200 4746750 5 0 15\.\d+ 0\.193000
+chr1 4736675 4733200 4746750 7 0 21\.\d+ 0\.193000
+chr1 4738225 4733200 4746750 6 0 18\.\d+ 0\.193000
+chr1 4740375 4733200 4746750 10 0 31\.\d+ 0\.189000
+chr1 4743875 4733200 4746750 8 0 24\.\d+ 0\.193000
+chr1 4744975 4733200 4746750 7 0 21\.\d+ 0\.193000
+chr1 4747475 4746800 4756450 9 0 28\.\d+ 0\.189000
+chr1 4749875 4746800 4756450 7 0 21\.\d+ 0\.193000
+chr1 4751325 4746800 4756450 6 0 18\.\d+ 0\.193000
+chr1 4752925 4746800 4756450 9 0 28\.\d+ 0\.189000
+chr1 4754525 4746800 4756450 9 0 28\.\d+ 0\.189000
+chr1 4755875 4746800 4756450 5 0 15\.\d+ 0\.193000
+chr1 4757975 4756750 4762650 9 0 28\.\d+ 0\.189000
+chr1 4760025 4756750 4762650 128 0 399\.\d+ 0\.133000
+chr1 4761475 4756750 4762650 74 0 230\.\d+ 0\.133000
+chr1 4764325 4763100 4767650 11 0 34\.\d+ 0\.189000
+chr1 4765275 4763100 4767650 7 0 21\.\d+ 0\.193000
+chr1 4766575 4763100 4767650 10 0 31\.\d+ 0\.189000
+chr1 4768525 4768050 4778800 5 0 15\.\d+ 0\.193000
+chr1 4769325 4768050 4778800 6 0 18\.\d+ 0\.193000
+chr1 4771725 4768050 4778800 37 0 115\.\d+ 0\.133000
+chr1 4773725 4768050 4778800 5 0 15\.\d+ 0\.193000
+chr1 4775325 4768050 4778800 7 0 21\.\d+ 0\.193000
+chr1 4776975 4768050 4778800 6 0 18\.\d+ 0\.193000
+chr1 4781125 4780750 4781850 4 0 12\.\d+ 0\.193000
+chr1 4784375 4783850 4785000 4 0 12\.\d+ 0\.193000
+chr1 4787025 4786400 4787800 6 0 18\.\d+ 0\.193000
+chr1 4789675 4789000 4793650 7 0 21\.\d+ 0\.193000
+chr1 4790975 4789000 4793650 6 0 18\.\d+ 0\.193000
+chr1 4792275 4789000 4793650 10 0 31\.\d+ 0\.189000
+chr1 4794975 4794200 4797900 7 0 21\.\d+ 0\.193000
+chr1 4796325 4794200 4797900 4 0 12\.\d+ 0\.193000
+chr1 4799975 4799000 4800750 6 0 18\.\d+ 0\.193000
+chr1 4801975 4800850 4808250 7 0 21\.\d+ 0\.193000
+chr1 4804975 4800850 4808250 7 0 21\.\d+ 0\.193000
+chr1 4806875 4800850 4808250 9 0 28\.\d+ 0\.189000
+chr1 4809925 4809250 4818000 8 0 24\.\d+ 0\.193000
+chr1 4811775 4809250 4818000 9 0 28\.\d+ 0\.189000
+chr1 4813825 4809250 4818000 6 0 18\.\d+ 0\.193000
+chr1 4815475 4809250 4818000 5 0 15\.\d+ 0\.193000
+chr1 4816925 4809250 4818000 5 0 15\.\d+ 0\.193000
+chr1 4820775 4819250 4824400 9 0 28\.\d+ 0\.189000
+chr1 4822725 4819250 4824400 5 0 15\.\d+ 0\.193000
+chr1 4823725 4819250 4824400 4 0 12\.\d+ 0\.193000
+chr1 4828975 4828350 4831300 4 0 12\.\d+ 0\.193000
+chr1 4830175 4828350 4831300 11 0 34\.\d+ 0\.189000
+chr1 4832075 4831400 4840050 4 0 12\.\d+ 0\.193000
+chr1 4833925 4831400 4840050 8 0 24\.\d+ 0\.193000
+chr1 4835275 4831400 4840050 7 0 21\.\d+ 0\.193000
+chr1 4839525 4831400 4840050 5 0 15\.\d+ 0\.193000
+chr1 4841375 4840600 4842150 4 0 12\.\d+ 0\.193000
+chr1 4843075 4842300 4852000 5 0 15\.\d+ 0\.193000
+chr1 4844075 4842300 4852000 8 0 24\.\d+ 0\.193000
+chr1 4845975 4842300 4852000 6 0 18\.\d+ 0\.193000
+chr1 4847075 4842300 4852000 4 0 12\.\d+ 0\.193000
+chr1 4849575 4842300 4852000 10 0 31\.\d+ 0\.189000
+chr1 4852675 4852100 4853850 4 0 12\.\d+ 0\.193000
+chr1 4855025 4854250 4856100 5 0 15\.\d+ 0\.193000
+chr1 4856725 4856150 4863100 4 0 12\.\d+ 0\.193000
+chr1 4857375 4856150 4863100 5 0 15\.\d+ 0\.193000
+chr1 4858375 4856150 4863100 6 0 18\.\d+ 0\.193000
+chr1 4861125 4856150 4863100 11 0 34\.\d+ 0\.189000
+chr1 4865525 4864400 4866300 6 0 18\.\d+ 0\.193000
+chr1 4872275 4871650 4875600 7 0 21\.\d+ 0\.193000
+chr1 4874225 4871650 4875600 7 0 21\.\d+ 0\.193000
+chr1 4877275 4876500 4878000 4 0 12\.\d+ 0\.193000
+chr1 4879825 4879050 4885000 5 0 15\.\d+ 0\.193000
+chr1 4880925 4879050 4885000 7 0 21\.\d+ 0\.193000
+chr1 4882725 4879050 4885000 8 0 24\.\d+ 0\.193000
+chr1 4885925 4885150 4886550 5 0 15\.\d+ 0\.193000
+chr1 4887025 4886600 4887750 4 0 12\.\d+ 0\.193000
+chr1 4890875 4889250 4896100 7 0 21\.\d+ 0\.193000
+chr1 4891925 4889250 4896100 9 0 28\.\d+ 0\.189000
+chr1 4892675 4889250 4896100 9 0 28\.\d+ 0\.189000
+chr1 4893575 4889250 4896100 7 0 21\.\d+ 0\.193000
+chr1 4894525 4889250 4896100 5 0 15\.\d+ 0\.193000
+chr1 4895575 4889250 4896100 4 0 12\.\d+ 0\.193000
+chr1 4897525 4896550 4904200 5 0 15\.\d+ 0\.193000
+chr1 4899675 4896550 4904200 7 0 21\.\d+ 0\.193000
+chr1 4902125 4896550 4904200 9 0 28\.\d+ 0\.189000
+chr1 4905925 4905100 4907750 7 0 21\.\d+ 0\.193000
+chr1 4908575 4907850 4911250 10 0 31\.\d+ 0\.189000
+chr1 4910325 4907850 4911250 6 0 18\.\d+ 0\.193000
+chr1 4914225 4913050 4924250 4 0 12\.\d+ 0\.193000
+chr1 4915625 4913050 4924250 8 0 24\.\d+ 0\.193000
+chr1 4917125 4913050 4924250 7 0 21\.\d+ 0\.193000
+chr1 4918175 4913050 4924250 8 0 24\.\d+ 0\.193000
+chr1 4919225 4913050 4924250 4 0 12\.\d+ 0\.193000
+chr1 4921425 4913050 4924250 6 0 18\.\d+ 0\.193000
+chr1 4925175 4924450 4935350 5 0 15\.\d+ 0\.193000
+chr1 4926425 4924450 4935350 6 0 18\.\d+ 0\.193000
+chr1 4927275 4924450 4935350 8 0 24\.\d+ 0\.193000
+chr1 4928675 4924450 4935350 8 0 24\.\d+ 0\.193000
+chr1 4931325 4924450 4935350 5 0 15\.\d+ 0\.193000
+chr1 4932625 4924450 4935350 5 0 15\.\d+ 0\.193000
+chr1 4934125 4924450 4935350 8 0 24\.\d+ 0\.193000
+chr1 4936125 4935500 4937950 8 0 24\.\d+ 0\.193000
+chr1 4944975 4944400 4947700 7 0 21\.\d+ 0\.193000
+chr1 4947075 4944400 4947700 5 0 15\.\d+ 0\.193000
+chr1 4952725 4952100 4964300 5 0 15\.\d+ 0\.193000
+chr1 4954225 4952100 4964300 6 0 18\.\d+ 0\.193000
+chr1 4955725 4952100 4964300 9 0 28\.\d+ 0\.189000
+chr1 4957475 4952100 4964300 8 0 24\.\d+ 0\.193000
+chr1 4958925 4952100 4964300 4 0 12\.\d+ 0\.193000
+chr1 4960075 4952100 4964300 8 0 24\.\d+ 0\.193000
+chr1 4961625 4952100 4964300 11 0 34\.\d+ 0\.189000
+chr1 4963075 4952100 4964300 7 0 21\.\d+ 0\.193000
+chr1 4967025 4965550 4970250 8 0 24\.\d+ 0\.193000
+chr1 4968175 4965550 4970250 6 0 18\.\d+ 0\.193000
+chr1 4975375 4974700 4976400 4 0 12\.\d+ 0\.193000
+chr1 4979975 4979400 4983450 5 0 15\.\d+ 0\.193000
+chr1 4981675 4979400 4983450 6 0 18\.\d+ 0\.193000
+chr1 4993025 4991700 4999350 5 0 15\.\d+ 0\.193000
+chr1 4994875 4991700 4999350 5 0 15\.\d+ 0\.193000
+chr1 4996125 4991700 4999350 10 0 31\.\d+ 0\.189000
+chr1 4997125 4991700 4999350 4 0 12\.\d+ 0\.193000
+chr1 4997775 4991700 4999350 5 0 15\.\d+ 0\.193000
+chr1 4998775 4991700 4999350 7 0 21\.\d+ 0\.193000
+chr1 5002325 5001700 5010700 4 0 12\.\d+ 0\.193000
+chr1 5004175 5001700 5010700 7 0 21\.\d+ 0\.193000
+chr1 5006175 5001700 5010700 6 0 18\.\d+ 0\.193000
+chr1 5008625 5001700 5010700 4 0 12\.\d+ 0\.193000
+chr1 5010075 5001700 5010700 4 0 12\.\d+ 0\.193000
+chr1 5011925 5010800 5015150 6 0 18\.\d+ 0\.193000
+chr1 5013425 5010800 5015150 5 0 15\.\d+ 0\.193000
+chr1 5014425 5010800 5015150 6 0 18\.\d+ 0\.193000
+chr1 5016275 5015500 5020500 4 0 12\.\d+ 0\.193000
+chr1 5017525 5015500 5020500 7 0 21\.\d+ 0\.193000
+chr1 5018825 5015500 5020500 7 0 21\.\d+ 0\.193000
+chr1 5019775 5015500 5020500 5 0 15\.\d+ 0\.193000
+chr1 5022225 5020800 5026100 5 0 15\.\d+ 0\.193000
+chr1 5023175 5020800 5026100 5 0 15\.\d+ 0\.193000
+chr1 5024625 5020800 5026100 6 0 18\.\d+ 0\.193000
+chr1 5045775 5044700 5048150 8 0 24\.\d+ 0\.193000
+chr1 5047475 5044700 5048150 5 0 15\.\d+ 0\.193000
+chr1 5055525 5053900 5058050 8 0 24\.\d+ 0\.193000
+chr1 5057325 5053900 5058050 6 0 18\.\d+ 0\.193000
+chr1 5059325 5058600 5060000 7 0 21\.\d+ 0\.193000
+chr1 5061925 5060800 5063500 15 0 46\.\d+ 0\.133000
+chr1 5065525 5063900 5068050 6 0 18\.\d+ 0\.193000
+chr1 5074275 5073700 5074850 4 0 12\.\d+ 0\.193000
+chr1 5075925 5075400 5080200 6 0 18\.\d+ 0\.193000
+chr1 5077225 5075400 5080200 6 0 18\.\d+ 0\.193000
+chr1 5078275 5075400 5080200 9 0 28\.\d+ 0\.189000
+chr1 5083375 5082600 5090800 4 0 12\.\d+ 0\.193000
+chr1 5086475 5082600 5090800 5 0 15\.\d+ 0\.193000
+chr1 5088175 5082600 5090800 6 0 18\.\d+ 0\.193000
+chr1 5090025 5082600 5090800 4 0 12\.\d+ 0\.193000
+chr1 5092875 5090900 5098600 5 0 15\.\d+ 0\.193000
+chr1 5094525 5090900 5098600 12 0 37\.\d+ 0\.133000
+chr1 5097975 5090900 5098600 5 0 15\.\d+ 0\.193000
+chr1 5106325 5105550 5109300 6 0 18\.\d+ 0\.193000
+chr1 5110675 5109600 5112950 5 0 15\.\d+ 0\.193000
+chr1 5112175 5109600 5112950 5 0 15\.\d+ 0\.193000
+chr1 5114275 5113600 5116850 8 0 24\.\d+ 0\.193000
+chr1 5116325 5113600 5116850 4 0 12\.\d+ 0\.193000
+chr1 5119075 5118350 5121050 5 0 15\.\d+ 0\.193000
+chr1 5122725 5122100 5123350 8 0 24\.\d+ 0\.193000
+chr1 5125975 5124950 5127600 6 0 18\.\d+ 0\.193000
+chr1 5128575 5128000 5136550 5 0 15\.\d+ 0\.193000
+chr1 5129925 5128000 5136550 8 0 24\.\d+ 0\.193000
+chr1 5132325 5128000 5136550 10 0 31\.\d+ 0\.189000
+chr1 5133575 5128000 5136550 4 0 12\.\d+ 0\.193000
+chr1 5134825 5128000 5136550 6 0 18\.\d+ 0\.193000
+chr1 5135925 5128000 5136550 4 0 12\.\d+ 0\.193000
+chr1 5137425 5136800 5138000 5 0 15\.\d+ 0\.193000
+chr1 5139025 5138250 5139800 4 0 12\.\d+ 0\.193000
+chr1 5142775 5141600 5144200 5 0 15\.\d+ 0\.193000
+chr1 5148625 5148200 5150600 5 0 15\.\d+ 0\.193000
+chr1 5151525 5150800 5156200 6 0 18\.\d+ 0\.193000
+chr1 5154075 5150800 5156200 5 0 15\.\d+ 0\.193000
+chr1 5155225 5150800 5156200 5 0 15\.\d+ 0\.193000
+chr1 5161975 5161200 5162750 4 0 12\.\d+ 0\.193000
+chr1 5164475 5163800 5165200 5 0 15\.\d+ 0\.193000
+chr1 5167125 5165800 5169800 6 0 18\.\d+ 0\.193000
+chr1 5168375 5165800 5169800 6 0 18\.\d+ 0\.193000
+chr1 5174925 5172300 5175650 15 0 46\.\d+ 0\.133000
+chr1 5177075 5175750 5180950 11 0 34\.\d+ 0\.189000
+chr1 5178875 5175750 5180950 7 0 21\.\d+ 0\.193000
+chr1 5194175 5193500 5203550 5 0 15\.\d+ 0\.193000
+chr1 5195025 5193500 5203550 5 0 15\.\d+ 0\.193000
+chr1 5196775 5193500 5203550 6 0 18\.\d+ 0\.193000
+chr1 5198225 5193500 5203550 13 0 40\.\d+ 0\.133000
+chr1 5201025 5193500 5203550 5 0 15\.\d+ 0\.193000
+chr1 5202075 5193500 5203550 11 0 34\.\d+ 0\.189000
+chr1 5203125 5193500 5203550 6 0 18\.\d+ 0\.193000
+chr1 5205775 5205150 5206300 4 0 12\.\d+ 0\.193000
+chr1 5207425 5206650 5210650 5 0 15\.\d+ 0\.193000
+chr1 5208725 5206650 5210650 8 0 24\.\d+ 0\.193000
+chr1 5212225 5210850 5215150 7 0 21\.\d+ 0\.193000
+chr1 5213475 5210850 5215150 5 0 15\.\d+ 0\.193000
+chr1 5214375 5210850 5215150 5 0 15\.\d+ 0\.193000
+chr1 5217175 5215900 5227150 8 0 24\.\d+ 0\.193000
+chr1 5218925 5215900 5227150 4 0 12\.\d+ 0\.193000
+chr1 5220175 5215900 5227150 6 0 18\.\d+ 0\.193000
+chr1 5221425 5215900 5227150 9 0 28\.\d+ 0\.189000
+chr1 5223575 5215900 5227150 7 0 21\.\d+ 0\.193000
+chr1 5224375 5215900 5227150 9 0 28\.\d+ 0\.189000
+chr1 5225975 5215900 5227150 6 0 18\.\d+ 0\.193000
+chr1 5229975 5229250 5231850 7 0 21\.\d+ 0\.193000
+chr1 5231075 5229250 5231850 4 0 12\.\d+ 0\.193000
+chr1 5232925 5232400 5233500 4 0 12\.\d+ 0\.193000
+chr1 5234475 5233800 5237550 4 0 12\.\d+ 0\.193000
+chr1 5235825 5233800 5237550 4 0 12\.\d+ 0\.193000
+chr1 5240125 5239500 5241650 6 0 18\.\d+ 0\.193000
+chr1 5241075 5239500 5241650 4 0 12\.\d+ 0\.193000
+chr1 5249175 5247500 5252250 4 0 12\.\d+ 0\.193000
+chr1 5250175 5247500 5252250 11 0 34\.\d+ 0\.189000
+chr1 5251175 5247500 5252250 5 0 15\.\d+ 0\.193000
+chr1 5253325 5252750 5255300 5 0 15\.\d+ 0\.193000
+chr1 5254725 5252750 5255300 5 0 15\.\d+ 0\.193000
+chr1 5256375 5255600 5256950 6 0 18\.\d+ 0\.193000
+chr1 5257475 5257000 5258200 4 0 12\.\d+ 0\.193000
+chr1 5265025 5264250 5265800 6 0 18\.\d+ 0\.193000
+chr1 5267625 5265900 5268400 9 0 28\.\d+ 0\.189000
+chr1 5270525 5269800 5276000 10 0 31\.\d+ 0\.189000
+chr1 5273575 5269800 5276000 5 0 15\.\d+ 0\.193000
+chr1 5275375 5269800 5276000 5 0 15\.\d+ 0\.193000
+chr1 5277575 5276150 5279150 6 0 18\.\d+ 0\.193000
+chr1 5279825 5279200 5281050 6 0 18\.\d+ 0\.193000
+chr1 5285775 5285150 5287400 6 0 18\.\d+ 0\.193000
+chr1 5288675 5288100 5291550 5 0 15\.\d+ 0\.193000
+chr1 5290925 5288100 5291550 4 0 12\.\d+ 0\.193000
+chr1 5292275 5291650 5293450 5 0 15\.\d+ 0\.193000
+chr1 5295475 5294850 5299450 6 0 18\.\d+ 0\.193000
+chr1 5297375 5294850 5299450 5 0 15\.\d+ 0\.193000
+chr1 5303725 5303150 5309300 5 0 15\.\d+ 0\.193000
+chr1 5305275 5303150 5309300 8 0 24\.\d+ 0\.193000
+chr1 5306625 5303150 5309300 9 0 28\.\d+ 0\.189000
+chr1 5308675 5303150 5309300 5 0 15\.\d+ 0\.193000
+chr1 5310025 5309550 5312000 5 0 15\.\d+ 0\.193000
+chr1 5311275 5309550 5312000 9 0 28\.\d+ 0\.189000
+chr1 5313175 5312250 5316300 5 0 15\.\d+ 0\.193000
+chr1 5314975 5312250 5316300 7 0 21\.\d+ 0\.193000
+chr1 5317175 5316400 5318750 4 0 12\.\d+ 0\.193000
+chr1 5323675 5323050 5329500 4 0 12\.\d+ 0\.193000
+chr1 5324825 5323050 5329500 6 0 18\.\d+ 0\.193000
+chr1 5327625 5323050 5329500 4 0 12\.\d+ 0\.193000
+chr1 5348875 5348250 5349450 6 0 18\.\d+ 0\.193000
+chr1 5354075 5353400 5357000 4 0 12\.\d+ 0\.193000
+chr1 5356225 5353400 5357000 5 0 15\.\d+ 0\.193000
+chr1 5364075 5363650 5365850 4 0 12\.\d+ 0\.193000
+chr1 5365125 5363650 5365850 7 0 21\.\d+ 0\.193000
+chr1 5369775 5369000 5375550 4 0 12\.\d+ 0\.193000
+chr1 5370725 5369000 5375550 5 0 15\.\d+ 0\.193000
+chr1 5372275 5369000 5375550 4 0 12\.\d+ 0\.193000
+chr1 5373925 5369000 5375550 4 0 12\.\d+ 0\.193000
+chr1 5374875 5369000 5375550 4 0 12\.\d+ 0\.193000
+chr1 5381625 5381000 5383200 4 0 12\.\d+ 0\.193000
+chr1 5382825 5381000 5383200 4 0 12\.\d+ 0\.193000
+chr1 5384325 5383800 5385000 7 0 21\.\d+ 0\.193000
+chr1 5386625 5385650 5387700 7 0 21\.\d+ 0\.193000
+chr1 5395225 5394650 5396000 4 0 12\.\d+ 0\.193000
+chr1 5396675 5396050 5398750 4 0 12\.\d+ 0\.193000
+chr1 5400875 5399200 5403500 7 0 21\.\d+ 0\.193000
+chr1 5407575 5407000 5411350 4 0 12\.\d+ 0\.193000
+chr1 5409525 5407000 5411350 6 0 18\.\d+ 0\.193000
+chr1 5412375 5411500 5413450 8 0 24\.\d+ 0\.193000
+chr1 5429675 5427700 5430400 8 0 24\.\d+ 0\.193000
+chr1 5431675 5430850 5433300 4 0 12\.\d+ 0\.193000
+chr1 5434275 5433650 5434750 4 0 12\.\d+ 0\.193000
+chr1 5440025 5439250 5440800 4 0 12\.\d+ 0\.193000
+chr1 5442275 5441650 5444200 6 0 18\.\d+ 0\.193000
+chr1 5448175 5447500 5449550 7 0 21\.\d+ 0\.193000
+chr1 5452325 5451600 5457500 4 0 12\.\d+ 0\.193000
+chr1 5453725 5451600 5457500 6 0 18\.\d+ 0\.193000
+chr1 5456175 5451600 5457500 5 0 15\.\d+ 0\.193000
+chr1 5475625 5475100 5477300 5 0 15\.\d+ 0\.193000
+chr1 5487775 5487100 5488500 5 0 15\.\d+ 0\.193000
+chr1 5496975 5495700 5499250 4 0 12\.\d+ 0\.193000
+chr1 5497825 5495700 5499250 5 0 15\.\d+ 0\.193000
+chr1 5506125 5501700 5509950 5 0 15\.\d+ 0\.193000
+chr1 5508775 5501700 5509950 4 0 12\.\d+ 0\.193000
+chr1 5510975 5510050 5511700 9 0 28\.\d+ 0\.189000
+chr1 5512575 5511900 5513200 6 0 18\.\d+ 0\.193000
+chr1 5514725 5514000 5516700 5 0 15\.\d+ 0\.193000
+chr1 5515525 5514000 5516700 4 0 12\.\d+ 0\.193000
+chr1 5524325 5523650 5525000 4 0 12\.\d+ 0\.193000
+chr1 5529975 5529250 5531450 4 0 12\.\d+ 0\.193000
+chr1 5532625 5531900 5534450 6 0 18\.\d+ 0\.193000
+chr1 5533875 5531900 5534450 6 0 18\.\d+ 0\.193000
+chr1 5540175 5539550 5541750 5 0 15\.\d+ 0\.193000
+chr1 5541075 5539550 5541750 4 0 12\.\d+ 0\.193000
+chr1 5549025 5548350 5551750 6 0 18\.\d+ 0\.193000
+chr1 5550025 5548350 5551750 4 0 12\.\d+ 0\.193000
+chr1 5551125 5548350 5551750 4 0 12\.\d+ 0\.193000
+chr1 5568475 5567950 5569000 7 0 21\.\d+ 0\.193000
+chr1 5569825 5569100 5573050 5 0 15\.\d+ 0\.193000
+chr1 5570575 5569100 5573050 7 0 21\.\d+ 0\.193000
+chr1 5571625 5569100 5573050 6 0 18\.\d+ 0\.193000
+chr1 5576875 5575800 5590800 5 0 15\.\d+ 0\.193000
+chr1 5577775 5575800 5590800 6 0 18\.\d+ 0\.193000
+chr1 5579775 5575800 5590800 5 0 15\.\d+ 0\.193000
+chr1 5581475 5575800 5590800 6 0 18\.\d+ 0\.193000
+chr1 5586075 5575800 5590800 6 0 18\.\d+ 0\.193000
+chr1 5587975 5575800 5590800 4 0 12\.\d+ 0\.193000
+chr1 5588975 5575800 5590800 6 0 18\.\d+ 0\.193000
+chr1 5590125 5575800 5590800 6 0 18\.\d+ 0\.193000
+chr1 5594075 5591050 5602000 10 0 31\.\d+ 0\.189000
+chr1 5596625 5591050 5602000 6 0 18\.\d+ 0\.193000
+chr1 5599225 5591050 5602000 4 0 12\.\d+ 0\.193000
+chr1 5600275 5591050 5602000 5 0 15\.\d+ 0\.193000
+chr1 5603725 5602100 5604250 4 0 12\.\d+ 0\.193000
+chr1 5606575 5604350 5609750 5 0 15\.\d+ 0\.193000
+chr1 5611875 5610500 5613650 4 0 12\.\d+ 0\.193000
+chr1 5612875 5610500 5613650 6 0 18\.\d+ 0\.193000
+chr1 5614875 5614250 5618100 6 0 18\.\d+ 0\.193000
+chr1 5616925 5614250 5618100 9 0 28\.\d+ 0\.189000
+chr1 5621725 5621000 5622450 5 0 15\.\d+ 0\.193000
+chr1 5632475 5631850 5636000 4 0 12\.\d+ 0\.193000
+chr1 5633525 5631850 5636000 5 0 15\.\d+ 0\.193000
+chr1 5646825 5646050 5655200 6 0 18\.\d+ 0\.193000
+chr1 5648725 5646050 5655200 9 0 28\.\d+ 0\.189000
+chr1 5649775 5646050 5655200 12 0 37\.\d+ 0\.133000
+chr1 5651925 5646050 5655200 7 0 21\.\d+ 0\.193000
+chr1 5653625 5646050 5655200 9 0 28\.\d+ 0\.189000
+chr1 5655975 5655300 5656700 5 0 15\.\d+ 0\.193000
+chr1 5657525 5657150 5658300 4 0 12\.\d+ 0\.193000
+chr1 5660625 5659950 5661050 4 0 12\.\d+ 0\.193000
+chr1 5666675 5666250 5667300 5 0 15\.\d+ 0\.193000
+chr1 5679225 5678650 5681350 7 0 21\.\d+ 0\.193000
+chr1 5680325 5678650 5681350 5 0 15\.\d+ 0\.193000
+chr1 5694925 5694400 5696050 4 0 12\.\d+ 0\.193000
+chr1 5697075 5696100 5697750 6 0 18\.\d+ 0\.193000
+chr1 5706275 5704550 5709600 6 0 18\.\d+ 0\.193000
+chr1 5712725 5712200 5713300 4 0 12\.\d+ 0\.193000
+chr1 5714575 5714000 5716900 5 0 15\.\d+ 0\.193000
+chr1 5716125 5714000 5716900 5 0 15\.\d+ 0\.193000
+chr1 5718675 5716950 5719450 6 0 18\.\d+ 0\.193000
+chr1 5726225 5725050 5728250 9 0 28\.\d+ 0\.189000
+chr1 5727525 5725050 5728250 5 0 15\.\d+ 0\.193000
+chr1 5742225 5741500 5743250 5 0 15\.\d+ 0\.193000
+chr1 5744775 5743300 5747400 4 0 12\.\d+ 0\.193000
+chr1 5745875 5743300 5747400 6 0 18\.\d+ 0\.193000
+chr1 5746675 5743300 5747400 5 0 15\.\d+ 0\.193000
+chr1 5751675 5751000 5752900 6 0 18\.\d+ 0\.193000
diff -r 000000000000 -r a0c8dc671a23 test-data/peakcalling_ccat/3.0/ccat_test_top_out_2.interval.sorted.re_match
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/peakcalling_ccat/3.0/ccat_test_top_out_2.interval.sorted.re_match Mon Jan 27 09:27:03 2014 -0500
@@ -0,0 +1,673 @@
+chr1 3002625 3002625 3002625 7 9 0\.\d+ 1\.000000
+chr1 3019925 3019925 3019925 8 10 0\.\d+ 1\.000000
+chr1 3021425 3021425 3021425 10 9 1\.\d+ 1\.000000
+chr1 3023575 3022750 3024750 4 0 14\.\d+ 1\.000000
+chr1 3026925 3026925 3026925 4 4 0\.\d+ 1\.000000
+chr1 3035775 3035775 3035775 5 7 0\.\d+ 1\.000000
+chr1 3038975 3038975 3038975 8 13 0\.\d+ 1\.000000
+chr1 3041425 3041425 3041425 6 1 4\.\d+ 1\.000000
+chr1 3052125 3052125 3052125 5 10 0\.\d+ 1\.000000
+chr1 3055075 3055075 3055075 6 1 4\.\d+ 1\.000000
+chr1 3062825 3062825 3062825 7 2 3\.\d+ 1\.000000
+chr1 3066475 3066475 3066475 6 6 1\.\d+ 1\.000000
+chr1 3071625 3071625 3071625 5 8 0\.\d+ 1\.000000
+chr1 3073725 3073725 3073725 4 4 0\.\d+ 1\.000000
+chr1 3086625 3086625 3086625 15 17 0\.\d+ 1\.000000
+chr1 3089025 3089025 3089025 5 5 0\.\d+ 1\.000000
+chr1 3093325 3093325 3093325 4 11 0\.\d+ 1\.000000
+chr1 3095325 3095325 3095325 9 12 0\.\d+ 1\.000000
+chr1 3105375 3105375 3105375 7 17 0\.\d+ 1\.000000
+chr1 3107225 3107225 3107225 9 12 0\.\d+ 1\.000000
+chr1 3110675 3110675 3110675 13 3 4\.\d+ 1\.000000
+chr1 3112225 3112225 3112225 8 8 1\.\d+ 1\.000000
+chr1 3114925 3114925 3114925 4 9 0\.\d+ 1\.000000
+chr1 3119625 3119625 3119625 7 9 0\.\d+ 1\.000000
+chr1 3122225 3122225 3122225 6 9 0\.\d+ 1\.000000
+chr1 3124225 3124225 3124225 5 6 0\.\d+ 1\.000000
+chr1 3126925 3126925 3126925 4 11 0\.\d+ 1\.000000
+chr1 3139075 3139075 3139075 5 1 4\.\d+ 1\.000000
+chr1 3156275 3156275 3156275 9 8 1\.\d+ 1\.000000
+chr1 3161375 3161375 3161375 8 11 0\.\d+ 1\.000000
+chr1 3168875 3168875 3168875 7 13 0\.\d+ 1\.000000
+chr1 3173775 3173775 3173775 5 4 1\.\d+ 1\.000000
+chr1 3180225 3180225 3180225 6 7 0\.\d+ 1\.000000
+chr1 3187375 3187375 3187375 9 16 0\.\d+ 1\.000000
+chr1 3188875 3188875 3188875 11 14 0\.\d+ 1\.000000
+chr1 3191875 3191875 3191875 8 9 0\.\d+ 1\.000000
+chr1 3196575 3196575 3196575 8 10 0\.\d+ 1\.000000
+chr1 3201925 3201925 3201925 8 8 1\.\d+ 1\.000000
+chr1 3205025 3205025 3205025 7 9 0\.\d+ 1\.000000
+chr1 3207475 3207475 3207475 13 13 1\.\d+ 1\.000000
+chr1 3210525 3210525 3210525 7 10 0\.\d+ 1\.000000
+chr1 3212475 3212475 3212475 9 7 1\.\d+ 1\.000000
+chr1 3215675 3215675 3215675 7 10 0\.\d+ 1\.000000
+chr1 3219525 3219525 3219525 13 11 1\.\d+ 1\.000000
+chr1 3240375 3240375 3240375 11 16 0\.\d+ 1\.000000
+chr1 3242775 3242775 3242775 12 15 0\.\d+ 1\.000000
+chr1 3245975 3245975 3245975 8 7 1\.\d+ 1\.000000
+chr1 3248275 3248275 3248275 7 9 0\.\d+ 1\.000000
+chr1 3256675 3256675 3256675 10 15 0\.\d+ 1\.000000
+chr1 3259875 3259875 3259875 5 7 0\.\d+ 1\.000000
+chr1 3274825 3274825 3274825 5 3 1\.\d+ 1\.000000
+chr1 3277125 3277125 3277125 4 9 0\.\d+ 1\.000000
+chr1 3280975 3280975 3280975 10 4 2\.\d+ 1\.000000
+chr1 3287925 3287925 3287925 9 2 4\.\d+ 1\.000000
+chr1 3290525 3290525 3290525 6 4 1\.\d+ 1\.000000
+chr1 3292325 3292325 3292325 10 9 1\.\d+ 1\.000000
+chr1 3302375 3302375 3302375 6 7 0\.\d+ 1\.000000
+chr1 3309575 3309575 3309575 10 15 0\.\d+ 1\.000000
+chr1 3312575 3312575 3312575 9 19 0\.\d+ 1\.000000
+chr1 3314825 3314825 3314825 6 14 0\.\d+ 1\.000000
+chr1 3317125 3317125 3317125 7 9 0\.\d+ 1\.000000
+chr1 3325325 3325325 3325325 10 11 0\.\d+ 1\.000000
+chr1 3334775 3334775 3334775 4 6 0\.\d+ 1\.000000
+chr1 3344175 3344175 3344175 4 6 0\.\d+ 1\.000000
+chr1 3347075 3347075 3347075 10 10 1\.\d+ 1\.000000
+chr1 3350025 3350025 3350025 5 3 1\.\d+ 1\.000000
+chr1 3353575 3353575 3353575 11 16 0\.\d+ 1\.000000
+chr1 3355625 3355625 3355625 9 11 0\.\d+ 1\.000000
+chr1 3357825 3357825 3357825 9 6 1\.\d+ 1\.000000
+chr1 3359925 3359925 3359925 8 13 0\.\d+ 1\.000000
+chr1 3361375 3361375 3361375 9 8 1\.\d+ 1\.000000
+chr1 3365225 3365225 3365225 7 10 0\.\d+ 1\.000000
+chr1 3371275 3371275 3371275 10 12 0\.\d+ 1\.000000
+chr1 3379875 3379875 3379875 6 10 0\.\d+ 1\.000000
+chr1 3383375 3383375 3383375 10 12 0\.\d+ 1\.000000
+chr1 3385875 3385875 3385875 6 9 0\.\d+ 1\.000000
+chr1 3389075 3389075 3389075 9 13 0\.\d+ 1\.000000
+chr1 3391175 3391175 3391175 7 10 0\.\d+ 1\.000000
+chr1 3395625 3395625 3395625 8 9 0\.\d+ 1\.000000
+chr1 3400225 3400225 3400225 5 10 0\.\d+ 1\.000000
+chr1 3402475 3402475 3402475 11 14 0\.\d+ 1\.000000
+chr1 3405125 3405125 3405125 9 16 0\.\d+ 1\.000000
+chr1 3407925 3407925 3407925 8 12 0\.\d+ 1\.000000
+chr1 3409725 3409725 3409725 9 12 0\.\d+ 1\.000000
+chr1 3413375 3413375 3413375 8 9 0\.\d+ 1\.000000
+chr1 3415725 3415725 3415725 9 7 1\.\d+ 1\.000000
+chr1 3418675 3418675 3418675 6 6 1\.\d+ 1\.000000
+chr1 3423425 3423425 3423425 7 9 0\.\d+ 1\.000000
+chr1 3424975 3424975 3424975 9 12 0\.\d+ 1\.000000
+chr1 3428075 3428075 3428075 6 7 0\.\d+ 1\.000000
+chr1 3430675 3430675 3430675 5 7 0\.\d+ 1\.000000
+chr1 3432825 3432825 3432825 5 6 0\.\d+ 1\.000000
+chr1 3436025 3436025 3436025 6 12 0\.\d+ 1\.000000
+chr1 3439225 3439225 3439225 11 9 1\.\d+ 1\.000000
+chr1 3442575 3442575 3442575 5 12 0\.\d+ 1\.000000
+chr1 3445775 3445775 3445775 5 7 0\.\d+ 1\.000000
+chr1 3448825 3448825 3448825 5 5 0\.\d+ 1\.000000
+chr1 3452475 3452475 3452475 8 9 0\.\d+ 1\.000000
+chr1 3454875 3454875 3454875 14 11 1\.\d+ 1\.000000
+chr1 3456575 3456575 3456575 6 5 1\.\d+ 1\.000000
+chr1 3458925 3458925 3458925 13 9 1\.\d+ 1\.000000
+chr1 3462325 3462325 3462325 11 5 2\.\d+ 1\.000000
+chr1 3466125 3466125 3466125 5 13 0\.\d+ 1\.000000
+chr1 3468425 3468425 3468425 5 13 0\.\d+ 1\.000000
+chr1 3472175 3472175 3472175 6 4 1\.\d+ 1\.000000
+chr1 3474675 3474675 3474675 6 9 0\.\d+ 1\.000000
+chr1 3478075 3478075 3478075 6 11 0\.\d+ 1\.000000
+chr1 3479975 3479975 3479975 7 4 1\.\d+ 1\.000000
+chr1 3484325 3484325 3484325 11 10 1\.\d+ 1\.000000
+chr1 3487225 3487225 3487225 6 11 0\.\d+ 1\.000000
+chr1 3489425 3489425 3489425 8 12 0\.\d+ 1\.000000
+chr1 3494775 3494775 3494775 6 10 0\.\d+ 1\.000000
+chr1 3497425 3497425 3497425 6 8 0\.\d+ 1\.000000
+chr1 3499475 3499475 3499475 10 12 0\.\d+ 1\.000000
+chr1 3503325 3503325 3503325 4 10 0\.\d+ 1\.000000
+chr1 3507575 3507575 3507575 12 12 1\.\d+ 1\.000000
+chr1 3509375 3509375 3509375 12 11 1\.\d+ 1\.000000
+chr1 3515075 3515075 3515075 6 13 0\.\d+ 1\.000000
+chr1 3518725 3518725 3518725 4 5 0\.\d+ 1\.000000
+chr1 3523575 3523575 3523575 5 4 1\.\d+ 1\.000000
+chr1 3529975 3529975 3529975 7 7 1\.\d+ 1\.000000
+chr1 3532175 3532175 3532175 7 8 0\.\d+ 1\.000000
+chr1 3534575 3534575 3534575 9 15 0\.\d+ 1\.000000
+chr1 3537225 3537225 3537225 10 17 0\.\d+ 1\.000000
+chr1 3540225 3540225 3540225 7 13 0\.\d+ 1\.000000
+chr1 3544425 3544425 3544425 9 18 0\.\d+ 1\.000000
+chr1 3546575 3546575 3546575 9 7 1\.\d+ 1\.000000
+chr1 3550975 3550975 3550975 7 5 1\.\d+ 1\.000000
+chr1 3556725 3556725 3556725 4 8 0\.\d+ 1\.000000
+chr1 3560225 3560225 3560225 10 6 1\.\d+ 1\.000000
+chr1 3563025 3563025 3563025 8 8 1\.\d+ 1\.000000
+chr1 3566825 3566825 3566825 8 7 1\.\d+ 1\.000000
+chr1 3569125 3569125 3569125 5 6 0\.\d+ 1\.000000
+chr1 3570775 3570775 3570775 9 13 0\.\d+ 1\.000000
+chr1 3573825 3573825 3573825 13 12 1\.\d+ 1\.000000
+chr1 3577575 3577575 3577575 7 7 1\.\d+ 1\.000000
+chr1 3580375 3580375 3580375 5 6 0\.\d+ 1\.000000
+chr1 3581625 3581625 3581625 5 12 0\.\d+ 1\.000000
+chr1 3583175 3583175 3583175 6 5 1\.\d+ 1\.000000
+chr1 3587025 3587025 3587025 8 13 0\.\d+ 1\.000000
+chr1 3592775 3592775 3592775 5 6 0\.\d+ 1\.000000
+chr1 3594275 3594275 3594275 9 12 0\.\d+ 1\.000000
+chr1 3596025 3596025 3596025 6 12 0\.\d+ 1\.000000
+chr1 3599475 3599475 3599475 5 6 0\.\d+ 1\.000000
+chr1 3602925 3602925 3602925 9 14 0\.\d+ 1\.000000
+chr1 3617525 3617525 3617525 6 12 0\.\d+ 1\.000000
+chr1 3621475 3621475 3621475 11 14 0\.\d+ 1\.000000
+chr1 3625675 3625675 3625675 8 10 0\.\d+ 1\.000000
+chr1 3628175 3628175 3628175 6 14 0\.\d+ 1\.000000
+chr1 3630075 3630075 3630075 7 6 1\.\d+ 1\.000000
+chr1 3633625 3633625 3633625 15 7 2\.\d+ 1\.000000
+chr1 3636275 3636275 3636275 11 9 1\.\d+ 1\.000000
+chr1 3641075 3641075 3641075 8 18 0\.\d+ 1\.000000
+chr1 3642775 3642775 3642775 10 9 1\.\d+ 1\.000000
+chr1 3646225 3646225 3646225 5 7 0\.\d+ 1\.000000
+chr1 3650225 3650225 3650225 7 8 0\.\d+ 1\.000000
+chr1 3653475 3653475 3653475 7 9 0\.\d+ 1\.000000
+chr1 3656225 3656225 3656225 6 8 0\.\d+ 1\.000000
+chr1 3658075 3658075 3658075 6 10 0\.\d+ 1\.000000
+chr1 3660175 3660175 3660175 7 14 0\.\d+ 1\.000000
+chr1 3662025 3662025 3662025 13 5 2\.\d+ 1\.000000
+chr1 3665825 3665825 3665825 6 3 1\.\d+ 1\.000000
+chr1 3668675 3668675 3668675 6 9 0\.\d+ 1\.000000
+chr1 3672425 3672425 3672425 6 4 1\.\d+ 1\.000000
+chr1 3677125 3677125 3677125 10 5 1\.\d+ 1\.000000
+chr1 3680375 3680375 3680375 12 10 1\.\d+ 1\.000000
+chr1 3683175 3683175 3683175 10 4 2\.\d+ 1\.000000
+chr1 3698525 3698525 3698525 6 7 0\.\d+ 1\.000000
+chr1 3700275 3700275 3700275 4 11 0\.\d+ 1\.000000
+chr1 3702575 3702575 3702575 6 9 0\.\d+ 1\.000000
+chr1 3704575 3704575 3704575 9 8 1\.\d+ 1\.000000
+chr1 3706075 3706075 3706075 9 6 1\.\d+ 1\.000000
+chr1 3710375 3710375 3710375 4 3 1\.\d+ 1\.000000
+chr1 3712225 3712225 3712225 10 10 1\.\d+ 1\.000000
+chr1 3714025 3714025 3714025 7 8 0\.\d+ 1\.000000
+chr1 3716975 3716975 3716975 5 11 0\.\d+ 1\.000000
+chr1 3721325 3721325 3721325 8 8 1\.\d+ 1\.000000
+chr1 3733425 3733425 3733425 10 9 1\.\d+ 1\.000000
+chr1 3737275 3737275 3737275 6 5 1\.\d+ 1\.000000
+chr1 3743175 3743175 3743175 6 7 0\.\d+ 1\.000000
+chr1 3744725 3744725 3744725 7 10 0\.\d+ 1\.000000
+chr1 3747975 3747975 3747975 11 10 1\.\d+ 1\.000000
+chr1 3750075 3750075 3750075 9 10 0\.\d+ 1\.000000
+chr1 3754825 3754825 3754825 4 8 0\.\d+ 1\.000000
+chr1 3764325 3764325 3764325 7 8 0\.\d+ 1\.000000
+chr1 3768425 3768425 3768425 5 7 0\.\d+ 1\.000000
+chr1 3770475 3770475 3770475 5 6 0\.\d+ 1\.000000
+chr1 3772125 3772125 3772125 7 9 0\.\d+ 1\.000000
+chr1 3776125 3776125 3776125 10 6 1\.\d+ 1\.000000
+chr1 3778225 3778225 3778225 9 5 1\.\d+ 1\.000000
+chr1 3780125 3780125 3780125 9 12 0\.\d+ 1\.000000
+chr1 3784475 3784475 3784475 8 6 1\.\d+ 1\.000000
+chr1 3789075 3789075 3789075 7 4 1\.\d+ 1\.000000
+chr1 3804525 3804525 3804525 9 8 1\.\d+ 1\.000000
+chr1 3813475 3813475 3813475 6 9 0\.\d+ 1\.000000
+chr1 3823975 3823975 3823975 10 9 1\.\d+ 1\.000000
+chr1 3827125 3827125 3827125 7 11 0\.\d+ 1\.000000
+chr1 3828925 3828925 3828925 8 11 0\.\d+ 1\.000000
+chr1 3832425 3832425 3832425 7 2 3\.\d+ 1\.000000
+chr1 3847325 3847325 3847325 5 13 0\.\d+ 1\.000000
+chr1 3850825 3850825 3850825 6 8 0\.\d+ 1\.000000
+chr1 3852875 3852875 3852875 6 10 0\.\d+ 1\.000000
+chr1 3856025 3856025 3856025 9 10 0\.\d+ 1\.000000
+chr1 3858175 3858175 3858175 10 7 1\.\d+ 1\.000000
+chr1 3860825 3860825 3860825 5 8 0\.\d+ 1\.000000
+chr1 3864925 3864925 3864925 6 11 0\.\d+ 1\.000000
+chr1 3870225 3870225 3870225 5 6 0\.\d+ 1\.000000
+chr1 3885325 3885325 3885325 8 5 1\.\d+ 1\.000000
+chr1 3887075 3887075 3887075 5 3 1\.\d+ 1\.000000
+chr1 3889925 3889925 3889925 4 6 0\.\d+ 1\.000000
+chr1 3892425 3892425 3892425 12 10 1\.\d+ 1\.000000
+chr1 3895875 3895875 3895875 8 10 0\.\d+ 1\.000000
+chr1 3900925 3900925 3900925 7 9 0\.\d+ 1\.000000
+chr1 3904625 3904625 3904625 14 7 2\.\d+ 1\.000000
+chr1 3906775 3906775 3906775 10 11 0\.\d+ 1\.000000
+chr1 3912525 3912525 3912525 4 5 0\.\d+ 1\.000000
+chr1 3916175 3916175 3916175 4 7 0\.\d+ 1\.000000
+chr1 3919325 3919325 3919325 6 10 0\.\d+ 1\.000000
+chr1 3924325 3924325 3924325 6 11 0\.\d+ 1\.000000
+chr1 3926175 3926175 3926175 9 9 1\.\d+ 1\.000000
+chr1 3931525 3931525 3931525 15 15 1\.\d+ 1\.000000
+chr1 3935675 3935675 3935675 10 3 3\.\d+ 1\.000000
+chr1 3941625 3941625 3941625 9 14 0\.\d+ 1\.000000
+chr1 3943575 3943575 3943575 7 7 1\.\d+ 1\.000000
+chr1 3946475 3946475 3946475 7 4 1\.\d+ 1\.000000
+chr1 3960175 3960175 3960175 9 10 0\.\d+ 1\.000000
+chr1 3961825 3961825 3961825 8 4 1\.\d+ 1\.000000
+chr1 3980475 3980475 3980475 6 7 0\.\d+ 1\.000000
+chr1 3984175 3984175 3984175 11 11 1\.\d+ 1\.000000
+chr1 3990125 3990125 3990125 4 9 0\.\d+ 1\.000000
+chr1 3992475 3992475 3992475 5 6 0\.\d+ 1\.000000
+chr1 3996025 3996025 3996025 5 7 0\.\d+ 1\.000000
+chr1 3997875 3997875 3997875 6 10 0\.\d+ 1\.000000
+chr1 4001075 4001075 4001075 7 4 1\.\d+ 1\.000000
+chr1 4002975 4002975 4002975 6 8 0\.\d+ 1\.000000
+chr1 4006925 4006925 4006925 12 19 0\.\d+ 1\.000000
+chr1 4014525 4014525 4014525 5 9 0\.\d+ 1\.000000
+chr1 4016225 4016225 4016225 6 12 0\.\d+ 1\.000000
+chr1 4020275 4020275 4020275 9 4 2\.\d+ 1\.000000
+chr1 4023225 4023225 4023225 5 8 0\.\d+ 1\.000000
+chr1 4027275 4027275 4027275 8 12 0\.\d+ 1\.000000
+chr1 4034075 4034075 4034075 4 7 0\.\d+ 1\.000000
+chr1 4036575 4036575 4036575 4 8 0\.\d+ 1\.000000
+chr1 4039725 4039725 4039725 5 5 0\.\d+ 1\.000000
+chr1 4045875 4045875 4045875 7 7 1\.\d+ 1\.000000
+chr1 4047825 4047825 4047825 9 13 0\.\d+ 1\.000000
+chr1 4050375 4050375 4050375 9 5 1\.\d+ 1\.000000
+chr1 4054275 4054275 4054275 7 10 0\.\d+ 1\.000000
+chr1 4059925 4059925 4059925 9 13 0\.\d+ 1\.000000
+chr1 4068975 4068975 4068975 7 10 0\.\d+ 1\.000000
+chr1 4077725 4077725 4077725 7 5 1\.\d+ 1\.000000
+chr1 4080975 4080975 4080975 8 8 1\.\d+ 1\.000000
+chr1 4082625 4082625 4082625 6 5 1\.\d+ 1\.000000
+chr1 4085775 4085775 4085775 9 10 0\.\d+ 1\.000000
+chr1 4086975 4086975 4086975 9 11 0\.\d+ 1\.000000
+chr1 4092125 4092125 4092125 8 3 2\.\d+ 1\.000000
+chr1 4094275 4094275 4094275 5 9 0\.\d+ 1\.000000
+chr1 4102775 4102775 4102775 5 3 1\.\d+ 1\.000000
+chr1 4104475 4104475 4104475 7 14 0\.\d+ 1\.000000
+chr1 4106675 4106675 4106675 10 15 0\.\d+ 1\.000000
+chr1 4111575 4111575 4111575 6 4 1\.\d+ 1\.000000
+chr1 4113375 4113375 4113375 7 14 0\.\d+ 1\.000000
+chr1 4115325 4115325 4115325 10 12 0\.\d+ 1\.000000
+chr1 4117975 4117975 4117975 6 6 1\.\d+ 1\.000000
+chr1 4126075 4126075 4126075 7 12 0\.\d+ 1\.000000
+chr1 4128575 4128575 4128575 16 12 1\.\d+ 1\.000000
+chr1 4131025 4131025 4131025 16 12 1\.\d+ 1\.000000
+chr1 4134325 4134325 4134325 26 14 1\.\d+ 1\.000000
+chr1 4138825 4138825 4138825 5 5 0\.\d+ 1\.000000
+chr1 4141025 4141025 4141025 8 16 0\.\d+ 1\.000000
+chr1 4147225 4147225 4147225 5 3 1\.\d+ 1\.000000
+chr1 4154875 4154875 4154875 6 4 1\.\d+ 1\.000000
+chr1 4157075 4157075 4157075 6 11 0\.\d+ 1\.000000
+chr1 4161125 4161125 4161125 8 9 0\.\d+ 1\.000000
+chr1 4165275 4165275 4165275 4 5 0\.\d+ 1\.000000
+chr1 4176475 4176475 4176475 7 6 1\.\d+ 1\.000000
+chr1 4178425 4178425 4178425 5 3 1\.\d+ 1\.000000
+chr1 4186025 4186025 4186025 9 15 0\.\d+ 1\.000000
+chr1 4192875 4192875 4192875 5 2 2\.\d+ 1\.000000
+chr1 4196825 4196825 4196825 12 12 1\.\d+ 1\.000000
+chr1 4199825 4199825 4199825 5 6 0\.\d+ 1\.000000
+chr1 4208725 4208725 4208725 4 3 1\.\d+ 1\.000000
+chr1 4213825 4213825 4213825 11 17 0\.\d+ 1\.000000
+chr1 4216025 4216025 4216025 7 8 0\.\d+ 1\.000000
+chr1 4218025 4218025 4218025 8 7 1\.\d+ 1\.000000
+chr1 4219525 4219525 4219525 12 12 1\.\d+ 1\.000000
+chr1 4221925 4221925 4221925 4 4 0\.\d+ 1\.000000
+chr1 4224325 4224325 4224325 4 12 0\.\d+ 1\.000000
+chr1 4234175 4234175 4234175 8 11 0\.\d+ 1\.000000
+chr1 4235625 4235625 4235625 9 15 0\.\d+ 1\.000000
+chr1 4238775 4238775 4238775 4 12 0\.\d+ 1\.000000
+chr1 4240525 4240525 4240525 6 6 1\.\d+ 1\.000000
+chr1 4247375 4247375 4247375 11 5 2\.\d+ 1\.000000
+chr1 4251025 4251025 4251025 15 9 1\.\d+ 1\.000000
+chr1 4253175 4253175 4253175 5 8 0\.\d+ 1\.000000
+chr1 4259725 4259725 4259725 7 11 0\.\d+ 1\.000000
+chr1 4262475 4262475 4262475 4 4 0\.\d+ 1\.000000
+chr1 4264425 4264425 4264425 5 7 0\.\d+ 1\.000000
+chr1 4266075 4266075 4266075 6 12 0\.\d+ 1\.000000
+chr1 4268075 4268075 4268075 6 9 0\.\d+ 1\.000000
+chr1 4272025 4272025 4272025 9 12 0\.\d+ 1\.000000
+chr1 4278925 4278925 4278925 6 3 1\.\d+ 1\.000000
+chr1 4280825 4280825 4280825 7 9 0\.\d+ 1\.000000
+chr1 4288875 4288875 4288875 5 6 0\.\d+ 1\.000000
+chr1 4290575 4290575 4290575 5 6 0\.\d+ 1\.000000
+chr1 4293175 4293175 4293175 9 15 0\.\d+ 1\.000000
+chr1 4295775 4295775 4295775 7 9 0\.\d+ 1\.000000
+chr1 4299025 4299025 4299025 4 7 0\.\d+ 1\.000000
+chr1 4300525 4300525 4300525 7 4 1\.\d+ 1\.000000
+chr1 4307025 4307025 4307025 5 5 0\.\d+ 1\.000000
+chr1 4308775 4308775 4308775 8 8 1\.\d+ 1\.000000
+chr1 4318325 4318325 4318325 9 13 0\.\d+ 1\.000000
+chr1 4324025 4322650 4324900 48 7 6\.\d+ 1\.000000
+chr1 4326375 4326375 4326375 8 9 0\.\d+ 1\.000000
+chr1 4334725 4334725 4334725 4 6 0\.\d+ 1\.000000
+chr1 4337875 4336700 4338600 60 4 14\.\d+ 0\.199000
+chr1 4340525 4340525 4340525 7 17 0\.\d+ 1\.000000
+chr1 4343675 4343675 4343675 13 13 1\.\d+ 1\.000000
+chr1 4346075 4346075 4346075 16 12 1\.\d+ 1\.000000
+chr1 4349225 4349225 4349225 7 10 0\.\d+ 1\.000000
+chr1 4353825 4353825 4353825 8 11 0\.\d+ 1\.000000
+chr1 4356625 4356625 4356625 8 14 0\.\d+ 1\.000000
+chr1 4360375 4360375 4360375 10 18 0\.\d+ 1\.000000
+chr1 4369375 4369375 4369375 4 13 0\.\d+ 1\.000000
+chr1 4374575 4374575 4374575 17 15 1\.\d+ 1\.000000
+chr1 4376825 4376825 4376825 12 11 1\.\d+ 1\.000000
+chr1 4380275 4380275 4380275 5 10 0\.\d+ 1\.000000
+chr1 4383775 4383775 4383775 5 14 0\.\d+ 1\.000000
+chr1 4385225 4385225 4385225 6 10 0\.\d+ 1\.000000
+chr1 4393875 4393875 4393875 5 4 1\.\d+ 1\.000000
+chr1 4396025 4396025 4396025 10 9 1\.\d+ 1\.000000
+chr1 4397575 4397575 4397575 14 17 0\.\d+ 1\.000000
+chr1 4400325 4400325 4400325 12 18 0\.\d+ 1\.000000
+chr1 4403125 4403125 4403125 8 11 0\.\d+ 1\.000000
+chr1 4408525 4407200 4409200 88 13 6\.\d+ 1\.000000
+chr1 4411975 4411975 4411975 12 10 1\.\d+ 1\.000000
+chr1 4413425 4413425 4413425 16 12 1\.\d+ 1\.000000
+chr1 4416675 4416675 4416675 15 12 1\.\d+ 1\.000000
+chr1 4421575 4421575 4421575 5 10 0\.\d+ 1\.000000
+chr1 4424125 4424125 4424125 8 12 0\.\d+ 1\.000000
+chr1 4426025 4426025 4426025 9 14 0\.\d+ 1\.000000
+chr1 4442225 4442225 4442225 9 6 1\.\d+ 1\.000000
+chr1 4444075 4444075 4444075 12 10 1\.\d+ 1\.000000
+chr1 4445575 4445575 4445575 10 6 1\.\d+ 1\.000000
+chr1 4448075 4448075 4448075 11 21 0\.\d+ 1\.000000
+chr1 4449975 4449975 4449975 14 12 1\.\d+ 1\.000000
+chr1 4453875 4453875 4453875 8 13 0\.\d+ 1\.000000
+chr1 4458175 4458175 4458175 7 11 0\.\d+ 1\.000000
+chr1 4460575 4460575 4460575 8 12 0\.\d+ 1\.000000
+chr1 4462725 4462725 4462725 13 14 0\.\d+ 1\.000000
+chr1 4465575 4465575 4465575 11 17 0\.\d+ 1\.000000
+chr1 4468175 4468175 4468175 10 6 1\.\d+ 1\.000000
+chr1 4471375 4471375 4471375 7 10 0\.\d+ 1\.000000
+chr1 4473375 4473375 4473375 10 11 0\.\d+ 1\.000000
+chr1 4479575 4479575 4479575 9 19 0\.\d+ 1\.000000
+chr1 4485975 4485975 4485975 17 10 1\.\d+ 1\.000000
+chr1 4488025 4488025 4488025 14 10 1\.\d+ 1\.000000
+chr1 4492225 4492225 4492225 10 7 1\.\d+ 1\.000000
+chr1 4494075 4494075 4494075 11 21 0\.\d+ 1\.000000
+chr1 4497175 4497175 4497175 13 8 1\.\d+ 1\.000000
+chr1 4499025 4499025 4499025 12 13 0\.\d+ 1\.000000
+chr1 4505625 4505625 4505625 9 9 1\.\d+ 1\.000000
+chr1 4507925 4507250 4509100 44 2 20\.\d+ 0\.199000
+chr1 4510825 4510825 4510825 18 13 1\.\d+ 1\.000000
+chr1 4516425 4516425 4516425 10 7 1\.\d+ 1\.000000
+chr1 4518275 4518275 4518275 6 2 2\.\d+ 1\.000000
+chr1 4521725 4521725 4521725 6 14 0\.\d+ 1\.000000
+chr1 4523925 4523925 4523925 14 15 0\.\d+ 1\.000000
+chr1 4526625 4526625 4526625 15 9 1\.\d+ 1\.000000
+chr1 4528775 4528775 4528775 15 17 0\.\d+ 1\.000000
+chr1 4532375 4532375 4532375 9 15 0\.\d+ 1\.000000
+chr1 4535425 4535425 4535425 18 7 2\.\d+ 1\.000000
+chr1 4538775 4538775 4538775 16 11 1\.\d+ 1\.000000
+chr1 4542975 4542975 4542975 7 6 1\.\d+ 1\.000000
+chr1 4545475 4545475 4545475 6 6 1\.\d+ 1\.000000
+chr1 4560175 4560175 4560175 7 8 0\.\d+ 1\.000000
+chr1 4562575 4562575 4562575 11 6 1\.\d+ 1\.000000
+chr1 4565075 4565075 4565075 7 11 0\.\d+ 1\.000000
+chr1 4566875 4566875 4566875 11 17 0\.\d+ 1\.000000
+chr1 4568825 4568825 4568825 9 21 0\.\d+ 1\.000000
+chr1 4570975 4570975 4570975 14 16 0\.\d+ 1\.000000
+chr1 4574525 4574525 4574525 9 12 0\.\d+ 1\.000000
+chr1 4577025 4577025 4577025 8 10 0\.\d+ 1\.000000
+chr1 4578975 4578975 4578975 10 15 0\.\d+ 1\.000000
+chr1 4584125 4584125 4584125 10 9 1\.\d+ 1\.000000
+chr1 4586925 4586925 4586925 6 8 0\.\d+ 1\.000000
+chr1 4589475 4589475 4589475 11 14 0\.\d+ 1\.000000
+chr1 4592075 4592075 4592075 11 16 0\.\d+ 1\.000000
+chr1 4593875 4593875 4593875 13 12 1\.\d+ 1\.000000
+chr1 4595225 4595225 4595225 18 18 1\.\d+ 1\.000000
+chr1 4599925 4599925 4599925 7 9 0\.\d+ 1\.000000
+chr1 4605325 4605325 4605325 11 12 0\.\d+ 1\.000000
+chr1 4607225 4607225 4607225 11 16 0\.\d+ 1\.000000
+chr1 4609225 4609225 4609225 9 11 0\.\d+ 1\.000000
+chr1 4613525 4613525 4613525 10 9 1\.\d+ 1\.000000
+chr1 4615725 4615725 4615725 8 14 0\.\d+ 1\.000000
+chr1 4618975 4618975 4618975 11 12 0\.\d+ 1\.000000
+chr1 4621925 4621925 4621925 6 6 1\.\d+ 1\.000000
+chr1 4629625 4629625 4629625 13 13 1\.\d+ 1\.000000
+chr1 4635075 4635075 4635075 11 13 0\.\d+ 1\.000000
+chr1 4638075 4638075 4638075 10 8 1\.\d+ 1\.000000
+chr1 4641675 4641675 4641675 7 10 0\.\d+ 1\.000000
+chr1 4644575 4644575 4644575 10 5 1\.\d+ 1\.000000
+chr1 4652575 4652575 4652575 7 7 1\.\d+ 1\.000000
+chr1 4658525 4658525 4658525 10 14 0\.\d+ 1\.000000
+chr1 4659725 4659725 4659725 11 15 0\.\d+ 1\.000000
+chr1 4662925 4662050 4671350 12 0 43\.\d+ 0\.025000
+chr1 4666375 4662050 4671350 13 0 47\.\d+ 0\.025000
+chr1 4669975 4662050 4671350 10 0 36\.\d+ 0\.034000
+chr1 4674175 4673000 4701600 5 0 18\.\d+ 0\.199000
+chr1 4676625 4673000 4701600 4 0 14\.\d+ 1\.000000
+chr1 4678725 4673000 4701600 7 0 25\.\d+ 0\.135000
+chr1 4681875 4673000 4701600 8 0 29\.\d+ 0\.034000
+chr1 4687925 4673000 4701600 10 0 36\.\d+ 0\.034000
+chr1 4692075 4673000 4701600 11 0 40\.\d+ 0\.034000
+chr1 4696075 4673000 4701600 11 0 40\.\d+ 0\.034000
+chr1 4697975 4673000 4701600 8 0 29\.\d+ 0\.034000
+chr1 4709775 4707550 4722700 7 0 25\.\d+ 0\.135000
+chr1 4711275 4707550 4722700 8 0 29\.\d+ 0\.034000
+chr1 4712625 4707550 4722700 11 0 40\.\d+ 0\.034000
+chr1 4714125 4707550 4722700 12 0 43\.\d+ 0\.025000
+chr1 4716275 4707550 4722700 16 0 58\.\d+ 0\.025000
+chr1 4727125 4725450 4779800 9 0 32\.\d+ 0\.034000
+chr1 4729475 4725450 4779800 5 0 18\.\d+ 0\.199000
+chr1 4732225 4725450 4779800 10 0 36\.\d+ 0\.034000
+chr1 4734675 4725450 4779800 12 0 43\.\d+ 0\.025000
+chr1 4736575 4725450 4779800 11 0 40\.\d+ 0\.034000
+chr1 4740175 4725450 4779800 16 0 58\.\d+ 0\.025000
+chr1 4744125 4725450 4779800 13 0 47\.\d+ 0\.025000
+chr1 4745275 4725450 4779800 14 0 51\.\d+ 0\.025000
+chr1 4747725 4725450 4779800 13 0 47\.\d+ 0\.025000
+chr1 4750225 4725450 4779800 11 0 40\.\d+ 0\.034000
+chr1 4753075 4725450 4779800 12 0 43\.\d+ 0\.025000
+chr1 4754675 4725450 4779800 10 0 36\.\d+ 0\.034000
+chr1 4760225 4725450 4779800 139 0 507\.\d+ 0\.025000
+chr1 4761625 4725450 4779800 87 0 318\.\d+ 0\.025000
+chr1 4764075 4725450 4779800 12 0 43\.\d+ 0\.025000
+chr1 4766525 4725450 4779800 12 0 43\.\d+ 0\.025000
+chr1 4769675 4725450 4779800 11 0 40\.\d+ 0\.034000
+chr1 4771925 4725450 4779800 48 0 175\.\d+ 0\.025000
+chr1 4775475 4725450 4779800 9 0 32\.\d+ 0\.034000
+chr1 4776725 4725450 4779800 8 0 29\.\d+ 0\.034000
+chr1 4781325 4780250 4782350 5 0 18\.\d+ 0\.199000
+chr1 4784575 4783350 4788300 5 0 18\.\d+ 0\.199000
+chr1 4787225 4783350 4788300 7 0 25\.\d+ 0\.135000
+chr1 4789875 4788500 4798400 9 0 32\.\d+ 0\.034000
+chr1 4792775 4788500 4798400 14 0 51\.\d+ 0\.025000
+chr1 4795025 4788500 4798400 10 0 36\.\d+ 0\.034000
+chr1 4799975 4798500 4818650 8 0 29\.\d+ 0\.034000
+chr1 4801775 4798500 4818650 9 0 32\.\d+ 0\.034000
+chr1 4805025 4798500 4818650 10 0 36\.\d+ 0\.034000
+chr1 4806725 4798500 4818650 11 0 40\.\d+ 0\.034000
+chr1 4811575 4798500 4818650 14 0 51\.\d+ 0\.025000
+chr1 4815475 4798500 4818650 9 0 32\.\d+ 0\.034000
+chr1 4817175 4798500 4818650 8 0 29\.\d+ 0\.034000
+chr1 4820975 4818750 4863650 14 0 51\.\d+ 0\.025000
+chr1 4830375 4818750 4863650 14 0 51\.\d+ 0\.025000
+chr1 4834175 4818750 4863650 11 0 40\.\d+ 0\.034000
+chr1 4839075 4818750 4863650 9 0 32\.\d+ 0\.034000
+chr1 4841375 4818750 4863650 6 0 21\.\d+ 0\.135000
+chr1 4844375 4818750 4863650 11 0 40\.\d+ 0\.034000
+chr1 4849775 4818750 4863650 13 0 47\.\d+ 0\.025000
+chr1 4853125 4818750 4863650 6 0 21\.\d+ 0\.135000
+chr1 4855175 4818750 4863650 7 0 25\.\d+ 0\.135000
+chr1 4858075 4818750 4863650 10 0 36\.\d+ 0\.034000
+chr1 4861025 4818750 4863650 13 0 47\.\d+ 0\.025000
+chr1 4865425 4863900 4870300 9 0 32\.\d+ 0\.034000
+chr1 4872625 4871150 4888250 12 0 43\.\d+ 0\.025000
+chr1 4874625 4871150 4888250 10 0 36\.\d+ 0\.034000
+chr1 4877125 4871150 4888250 5 0 18\.\d+ 0\.199000
+chr1 4880375 4871150 4888250 9 0 32\.\d+ 0\.034000
+chr1 4882475 4871150 4888250 10 0 36\.\d+ 0\.034000
+chr1 4885775 4871150 4888250 6 0 21\.\d+ 0\.135000
+chr1 4892125 4888750 4938450 14 0 51\.\d+ 0\.025000
+chr1 4897425 4888750 4938450 6 0 21\.\d+ 0\.135000
+chr1 4899375 4888750 4938450 11 0 40\.\d+ 0\.034000
+chr1 4902375 4888750 4938450 14 0 51\.\d+ 0\.025000
+chr1 4906075 4888750 4938450 12 0 43\.\d+ 0\.025000
+chr1 4908725 4888750 4938450 13 0 47\.\d+ 0\.025000
+chr1 4910475 4888750 4938450 8 0 29\.\d+ 0\.034000
+chr1 4915375 4888750 4938450 12 0 43\.\d+ 0\.025000
+chr1 4917725 4888750 4938450 12 0 43\.\d+ 0\.025000
+chr1 4921725 4888750 4938450 10 0 36\.\d+ 0\.034000
+chr1 4926725 4888750 4938450 12 0 43\.\d+ 0\.025000
+chr1 4931075 4888750 4938450 7 0 25\.\d+ 0\.135000
+chr1 4933975 4888750 4938450 13 0 47\.\d+ 0\.025000
+chr1 4936475 4888750 4938450 12 0 43\.\d+ 0\.025000
+chr1 4945325 4943900 4949650 10 0 36\.\d+ 0\.034000
+chr1 4953925 4951600 4964800 9 0 32\.\d+ 0\.034000
+chr1 4955475 4951600 4964800 12 0 43\.\d+ 0\.025000
+chr1 4961575 4951600 4964800 15 0 54\.\d+ 0\.025000
+chr1 4963275 4951600 4964800 10 0 36\.\d+ 0\.034000
+chr1 4967025 4965050 4970850 12 0 43\.\d+ 0\.025000
+chr1 4975525 4974200 4976900 6 0 21\.\d+ 0\.135000
+chr1 4981425 4978900 4987150 10 0 36\.\d+ 0\.034000
+chr1 4984925 4978900 4987150 4 0 14\.\d+ 1\.000000
+chr1 4993575 4990250 5026600 7 0 25\.\d+ 0\.135000
+chr1 4996075 4990250 5026600 15 0 54\.\d+ 0\.025000
+chr1 4998375 4990250 5026600 12 0 43\.\d+ 0\.025000
+chr1 5002675 4990250 5026600 6 0 21\.\d+ 0\.135000
+chr1 5004175 4990250 5026600 11 0 40\.\d+ 0\.034000
+chr1 5008925 4990250 5026600 6 0 21\.\d+ 0\.135000
+chr1 5012025 4990250 5026600 9 0 32\.\d+ 0\.034000
+chr1 5014125 4990250 5026600 9 0 32\.\d+ 0\.034000
+chr1 5017375 4990250 5026600 9 0 32\.\d+ 0\.034000
+chr1 5019075 4990250 5026600 10 0 36\.\d+ 0\.034000
+chr1 5022575 4990250 5026600 8 0 29\.\d+ 0\.034000
+chr1 5024225 4990250 5026600 9 0 32\.\d+ 0\.034000
+chr1 5033175 5032000 5036100 4 0 14\.\d+ 1\.000000
+chr1 5039275 5037850 5040800 5 0 18\.\d+ 0\.199000
+chr1 5045675 5044200 5048700 11 0 40\.\d+ 0\.034000
+chr1 5055275 5053400 5068550 9 0 32\.\d+ 0\.034000
+chr1 5057075 5053400 5068550 10 0 36\.\d+ 0\.034000
+chr1 5059225 5053400 5068550 8 0 29\.\d+ 0\.034000
+chr1 5061725 5053400 5068550 19 0 69\.\d+ 0\.025000
+chr1 5064875 5053400 5068550 9 0 32\.\d+ 0\.034000
+chr1 5078525 5073200 5080700 13 0 47\.\d+ 0\.025000
+chr1 5083325 5080750 5101500 6 0 21\.\d+ 0\.135000
+chr1 5086225 5080750 5101500 7 0 25\.\d+ 0\.135000
+chr1 5088225 5080750 5101500 8 0 29\.\d+ 0\.034000
+chr1 5092375 5080750 5101500 6 0 21\.\d+ 0\.135000
+chr1 5094825 5080750 5101500 19 0 69\.\d+ 0\.025000
+chr1 5097675 5080750 5101500 6 0 21\.\d+ 0\.135000
+chr1 5106525 5105050 5117450 11 0 40\.\d+ 0\.034000
+chr1 5110775 5105050 5117450 7 0 25\.\d+ 0\.135000
+chr1 5112225 5105050 5117450 7 0 25\.\d+ 0\.135000
+chr1 5114025 5105050 5117450 9 0 32\.\d+ 0\.034000
+chr1 5116025 5105050 5117450 5 0 18\.\d+ 0\.199000
+chr1 5119225 5117850 5121550 6 0 21\.\d+ 0\.135000
+chr1 5122775 5121600 5140300 9 0 32\.\d+ 0\.034000
+chr1 5125725 5121600 5140300 8 0 29\.\d+ 0\.034000
+chr1 5130175 5121600 5140300 13 0 47\.\d+ 0\.025000
+chr1 5132075 5121600 5140300 14 0 51\.\d+ 0\.025000
+chr1 5134725 5121600 5140300 8 0 29\.\d+ 0\.034000
+chr1 5137425 5121600 5140300 5 0 18\.\d+ 0\.199000
+chr1 5138925 5121600 5140300 6 0 21\.\d+ 0\.135000
+chr1 5143275 5140350 5157200 7 0 25\.\d+ 0\.135000
+chr1 5148975 5140350 5157200 9 0 32\.\d+ 0\.034000
+chr1 5151825 5140350 5157200 10 0 36\.\d+ 0\.034000
+chr1 5153825 5140350 5157200 8 0 29\.\d+ 0\.034000
+chr1 5161725 5159000 5163250 5 0 18\.\d+ 0\.199000
+chr1 5164425 5163300 5181450 6 0 21\.\d+ 0\.135000
+chr1 5167425 5163300 5181450 10 0 36\.\d+ 0\.034000
+chr1 5174775 5163300 5181450 19 0 69\.\d+ 0\.025000
+chr1 5177325 5163300 5181450 17 0 62\.\d+ 0\.025000
+chr1 5179175 5163300 5181450 11 0 40\.\d+ 0\.034000
+chr1 5195375 5193000 5227900 9 0 32\.\d+ 0\.034000
+chr1 5198075 5193000 5227900 17 0 62\.\d+ 0\.025000
+chr1 5201925 5193000 5227900 15 0 54\.\d+ 0\.025000
+chr1 5205575 5193000 5227900 5 0 18\.\d+ 0\.199000
+chr1 5208475 5193000 5227900 13 0 47\.\d+ 0\.025000
+chr1 5211875 5193000 5227900 10 0 36\.\d+ 0\.034000
+chr1 5213875 5193000 5227900 9 0 32\.\d+ 0\.034000
+chr1 5216925 5193000 5227900 10 0 36\.\d+ 0\.034000
+chr1 5220875 5193000 5227900 13 0 47\.\d+ 0\.025000
+chr1 5224025 5193000 5227900 13 0 47\.\d+ 0\.025000
+chr1 5229925 5228750 5242150 8 0 29\.\d+ 0\.034000
+chr1 5232775 5228750 5242150 5 0 18\.\d+ 0\.199000
+chr1 5234575 5228750 5242150 6 0 21\.\d+ 0\.135000
+chr1 5236125 5228750 5242150 6 0 21\.\d+ 0\.135000
+chr1 5237875 5228750 5242150 4 0 14\.\d+ 1\.000000
+chr1 5240425 5228750 5242150 7 0 25\.\d+ 0\.135000
+chr1 5249925 5247000 5258700 13 0 47\.\d+ 0\.025000
+chr1 5253675 5247000 5258700 8 0 29\.\d+ 0\.034000
+chr1 5256175 5247000 5258700 7 0 25\.\d+ 0\.135000
+chr1 5264925 5263750 5268900 8 0 29\.\d+ 0\.034000
+chr1 5267725 5263750 5268900 10 0 36\.\d+ 0\.034000
+chr1 5270275 5269300 5281550 11 0 40\.\d+ 0\.034000
+chr1 5273425 5269300 5281550 6 0 21\.\d+ 0\.135000
+chr1 5277575 5269300 5281550 9 0 32\.\d+ 0\.034000
+chr1 5280075 5269300 5281550 7 0 25\.\d+ 0\.135000
+chr1 5283375 5282250 5299950 5 0 18\.\d+ 0\.199000
+chr1 5286125 5282250 5299950 11 0 40\.\d+ 0\.034000
+chr1 5289075 5282250 5299950 9 0 32\.\d+ 0\.034000
+chr1 5292575 5282250 5299950 9 0 32\.\d+ 0\.034000
+chr1 5295575 5282250 5299950 8 0 29\.\d+ 0\.034000
+chr1 5297125 5282250 5299950 7 0 25\.\d+ 0\.135000
+chr1 5302025 5300700 5319250 4 0 14\.\d+ 1\.000000
+chr1 5305425 5300700 5319250 10 0 36\.\d+ 0\.034000
+chr1 5306825 5300700 5319250 12 0 43\.\d+ 0\.025000
+chr1 5311175 5300700 5319250 10 0 36\.\d+ 0\.034000
+chr1 5313325 5300700 5319250 8 0 29\.\d+ 0\.034000
+chr1 5315275 5300700 5319250 8 0 29\.\d+ 0\.034000
+chr1 5317425 5300700 5319250 7 0 25\.\d+ 0\.135000
+chr1 5324575 5322550 5334750 8 0 29\.\d+ 0\.034000
+chr1 5327875 5322550 5334750 7 0 25\.\d+ 0\.135000
+chr1 5331125 5322550 5334750 6 0 21\.\d+ 0\.135000
+chr1 5348875 5347750 5349950 6 0 21\.\d+ 0\.135000
+chr1 5354175 5352900 5357500 6 0 21\.\d+ 0\.135000
+chr1 5355975 5352900 5357500 7 0 25\.\d+ 0\.135000
+chr1 5361225 5357550 5366350 6 0 21\.\d+ 0\.135000
+chr1 5364775 5357550 5366350 8 0 29\.\d+ 0\.034000
+chr1 5370375 5368500 5389350 8 0 29\.\d+ 0\.034000
+chr1 5372525 5368500 5389350 6 0 21\.\d+ 0\.135000
+chr1 5374275 5368500 5389350 6 0 21\.\d+ 0\.135000
+chr1 5377125 5368500 5389350 4 0 14\.\d+ 1\.000000
+chr1 5381625 5368500 5389350 4 0 14\.\d+ 1\.000000
+chr1 5384575 5368500 5389350 8 0 29\.\d+ 0\.034000
+chr1 5386675 5368500 5389350 11 0 40\.\d+ 0\.034000
+chr1 5395375 5390850 5406350 5 0 18\.\d+ 0\.199000
+chr1 5396875 5390850 5406350 5 0 18\.\d+ 0\.199000
+chr1 5401025 5390850 5406350 8 0 29\.\d+ 0\.034000
+chr1 5409325 5406500 5414000 9 0 32\.\d+ 0\.034000
+chr1 5412475 5406500 5414000 11 0 40\.\d+ 0\.034000
+chr1 5429475 5427200 5435250 11 0 40\.\d+ 0\.034000
+chr1 5431425 5427200 5435250 6 0 21\.\d+ 0\.135000
+chr1 5434275 5427200 5435250 4 0 14\.\d+ 1\.000000
+chr1 5440025 5438750 5445150 6 0 21\.\d+ 0\.135000
+chr1 5442625 5438750 5445150 10 0 36\.\d+ 0\.034000
+chr1 5448375 5445350 5450050 9 0 32\.\d+ 0\.034000
+chr1 5453625 5450900 5458700 7 0 25\.\d+ 0\.135000
+chr1 5456475 5450900 5458700 6 0 21\.\d+ 0\.135000
+chr1 5475625 5474600 5479600 5 0 18\.\d+ 0\.199000
+chr1 5485175 5482700 5489150 4 0 14\.\d+ 1\.000000
+chr1 5487825 5482700 5489150 6 0 21\.\d+ 0\.135000
+chr1 5496625 5495200 5499750 7 0 25\.\d+ 0\.135000
+chr1 5502325 5501200 5517200 5 0 18\.\d+ 0\.199000
+chr1 5505875 5501200 5517200 6 0 21\.\d+ 0\.135000
+chr1 5507675 5501200 5517200 6 0 21\.\d+ 0\.135000
+chr1 5510825 5501200 5517200 12 0 43\.\d+ 0\.025000
+chr1 5515275 5501200 5517200 7 0 25\.\d+ 0\.135000
+chr1 5524125 5521900 5536850 5 0 18\.\d+ 0\.199000
+chr1 5530525 5521900 5536850 8 0 29\.\d+ 0\.034000
+chr1 5532875 5521900 5536850 11 0 40\.\d+ 0\.034000
+chr1 5539925 5538950 5542250 6 0 21\.\d+ 0\.135000
+chr1 5548775 5547250 5552250 7 0 25\.\d+ 0\.135000
+chr1 5550725 5547250 5552250 7 0 25\.\d+ 0\.135000
+chr1 5564125 5562650 5566050 4 0 14\.\d+ 1\.000000
+chr1 5568875 5567450 5573850 8 0 29\.\d+ 0\.034000
+chr1 5570325 5567450 5573850 11 0 40\.\d+ 0\.034000
+chr1 5571725 5567450 5573850 9 0 32\.\d+ 0\.034000
+chr1 5577575 5575300 5618600 9 0 32\.\d+ 0\.034000
+chr1 5579625 5575300 5618600 8 0 29\.\d+ 0\.034000
+chr1 5581825 5575300 5618600 9 0 32\.\d+ 0\.034000
+chr1 5584125 5575300 5618600 4 0 14\.\d+ 1\.000000
+chr1 5585925 5575300 5618600 9 0 32\.\d+ 0\.034000
+chr1 5588325 5575300 5618600 7 0 25\.\d+ 0\.135000
+chr1 5591875 5575300 5618600 5 0 18\.\d+ 0\.199000
+chr1 5593825 5575300 5618600 17 0 62\.\d+ 0\.025000
+chr1 5596475 5575300 5618600 7 0 25\.\d+ 0\.135000
+chr1 5598575 5575300 5618600 5 0 18\.\d+ 0\.199000
+chr1 5603475 5575300 5618600 5 0 18\.\d+ 0\.199000
+chr1 5606225 5575300 5618600 6 0 21\.\d+ 0\.135000
+chr1 5612475 5575300 5618600 8 0 29\.\d+ 0\.034000
+chr1 5614975 5575300 5618600 8 0 29\.\d+ 0\.034000
+chr1 5616675 5575300 5618600 11 0 40\.\d+ 0\.034000
+chr1 5621625 5618950 5622950 6 0 21\.\d+ 0\.135000
+chr1 5632975 5631350 5638100 6 0 21\.\d+ 0\.135000
+chr1 5635025 5631350 5638100 5 0 18\.\d+ 0\.199000
+chr1 5637125 5631350 5638100 4 0 14\.\d+ 1\.000000
+chr1 5647075 5645550 5668850 8 0 29\.\d+ 0\.034000
+chr1 5649475 5645550 5668850 13 0 47\.\d+ 0\.025000
+chr1 5651825 5645550 5668850 9 0 32\.\d+ 0\.034000
+chr1 5653275 5645550 5668850 11 0 40\.\d+ 0\.034000
+chr1 5656025 5645550 5668850 6 0 21\.\d+ 0\.135000
+chr1 5660675 5645550 5668850 4 0 14\.\d+ 1\.000000
+chr1 5664225 5645550 5668850 5 0 18\.\d+ 0\.199000
+chr1 5666375 5645550 5668850 6 0 21\.\d+ 0\.135000
+chr1 5679325 5675600 5681850 8 0 29\.\d+ 0\.034000
+chr1 5688775 5687300 5691900 6 0 21\.\d+ 0\.135000
+chr1 5695175 5693900 5701400 7 0 25\.\d+ 0\.135000
+chr1 5696975 5693900 5701400 7 0 25\.\d+ 0\.135000
+chr1 5699925 5693900 5701400 4 0 14\.\d+ 1\.000000
+chr1 5706725 5703650 5710750 8 0 29\.\d+ 0\.034000
+chr1 5712725 5711700 5719950 4 0 14\.\d+ 1\.000000
+chr1 5716025 5711700 5719950 7 0 25\.\d+ 0\.135000
+chr1 5718625 5711700 5719950 7 0 25\.\d+ 0\.135000
+chr1 5722875 5720500 5731000 5 0 18\.\d+ 0\.199000
+chr1 5726025 5720500 5731000 11 0 40\.\d+ 0\.034000
+chr1 5742375 5741000 5748200 7 0 25\.\d+ 0\.135000
+chr1 5744425 5741000 5748200 6 0 21\.\d+ 0\.135000
+chr1 5746175 5741000 5748200 9 0 32\.\d+ 0\.034000
+chr1 5751925 5749150 5753500 7 0 25\.\d+ 0\.135000
diff -r 000000000000 -r a0c8dc671a23 tool-data/ccat_configurations.loc.sample
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/ccat_configurations.loc.sample Mon Jan 27 09:27:03 2014 -0500
@@ -0,0 +1,5 @@
+#Provide Pre-compiled CCAT peak/region caller configuration files
+#UID Description path_to_config_file
+#ccat_3.0_tf_config CCAT 3.0 provided Transcription Factor Binding /path_to/ccat/configs/3.0/config_TF.txt
+#ccat_3.0_histone_config CCAT 3.0 provided Histone Modification /path_to/ccat/configs/3.0/config_histone.txt
+#ccat_3.0_histone_config_fixed CCAT 3.0 Histone Factor Binding (readme.txt defaults: slidingWinSize=1000) /path_to/ccat/configs/3.0/config_histone_readme.txt
\ No newline at end of file
diff -r 000000000000 -r a0c8dc671a23 tool_data_table_conf.xml.sample
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_data_table_conf.xml.sample Mon Jan 27 09:27:03 2014 -0500
@@ -0,0 +1,8 @@
+
+
+
+
+
diff -r 000000000000 -r a0c8dc671a23 tool_dependencies.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml Mon Jan 27 09:27:03 2014 -0500
@@ -0,0 +1,6 @@
+
+
+
+
+
+