Mercurial > repos > devteam > condense_characters
view condense_characters.xml @ 2:381ed54c5e39 draft default tip
planemo upload commit 00a7926c285bc4a339bd7deebf40b28f39c7d947-dirty
author | devteam |
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date | Tue, 21 Jul 2015 14:16:58 -0400 |
parents | af7fe71973ac |
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<tool id="Condense characters1" name="Condense" version="1.0.0"> <description>consecutive characters</description> <command interpreter="perl">condense_characters.pl "${input}" "${character}" "${out_file1}"</command> <inputs> <!-- <display>condense all consecutive $character from $input</display> --> <param name="character" type="select" label="Condense all consecutive"> <option value="T">Tabs</option> <option value="Sp">Spaces</option> <option value="Dt">Dots</option> <option value="C">Commas</option> <option value="D">Dashes</option> <option value="U">Underscores</option> <option value="P">Pipes</option> </param> <param format="txt" name="input" type="data" label="in this Query"/> </inputs> <outputs> <data format="input" name="out_file1" metadata_source="input" /> </outputs> <tests> <test> <param name="character" value="T"/> <param name="input" value="1.bed"/> <output name="out_file1" file="eq-condense.dat"/> </test> </tests> <help> **What it does** This tool condenses all consecutive characters of a specified type. ----- **Example** - Input file:: geneX,,,10,,,,,20 geneY,,5,,,,,12,15,9, - Condense all consecutive commas. The above file will be converted into:: geneX,10,20 geneY,5,12,15,9 </help> </tool>