Mercurial > repos > devteam > count_gff_features
diff test-data/gff2bed_in2.gff @ 0:fabda887a71f draft
Imported from capsule None
| author | devteam |
|---|---|
| date | Mon, 28 Jul 2014 11:56:10 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/gff2bed_in2.gff Mon Jul 28 11:56:10 2014 -0400 @@ -0,0 +1,13 @@ +chr1 Cufflinks exon 3204563 3207049 1000 - . gene_id "Xkr4"; transcript_id "Xkr4"; exon_number "1"; FPKM "0.3924207844"; frac "1.000000"; conf_lo "0.000000"; conf_hi "0.845549"; cov "0.022289"; +chr1 Cufflinks exon 3411783 3411982 1000 - . gene_id "Xkr4"; transcript_id "Xkr4"; exon_number "2"; FPKM "0.3924207844"; frac "1.000000"; conf_lo "0.000000"; conf_hi "0.845549"; cov "0.022289"; +chr1 Cufflinks exon 3660633 3661579 1000 - . gene_id "Xkr4"; transcript_id "Xkr4"; exon_number "3"; FPKM "0.3924207844"; frac "1.000000"; conf_lo "0.000000"; conf_hi "0.845549"; cov "0.022289"; +chr1 Cufflinks exon 4481009 4482749 1000 - . gene_id "Sox17"; transcript_id "Sox17"; exon_number "1"; FPKM "1.5186976896"; frac "1.000000"; conf_lo "0.558189"; conf_hi "2.479206"; cov "0.086262"; +chr1 Cufflinks exon 4483181 4483547 1000 - . gene_id "Sox17"; transcript_id "Sox17"; exon_number "2"; FPKM "1.5186976896"; frac "1.000000"; conf_lo "0.558189"; conf_hi "2.479206"; cov "0.086262"; +chr1 Cufflinks exon 4483853 4483944 1000 - . gene_id "Sox17"; transcript_id "Sox17"; exon_number "3"; FPKM "1.5186976896"; frac "1.000000"; conf_lo "0.558189"; conf_hi "2.479206"; cov "0.086262"; +chr1 Cufflinks exon 4485217 4486023 1000 - . gene_id "Sox17"; transcript_id "Sox17"; exon_number "4"; FPKM "1.5186976896"; frac "1.000000"; conf_lo "0.558189"; conf_hi "2.479206"; cov "0.086262"; +chr1 Cufflinks exon 4486372 4486494 1000 - . gene_id "Sox17"; transcript_id "Sox17"; exon_number "5"; FPKM "1.5186976896"; frac "1.000000"; conf_lo "0.558189"; conf_hi "2.479206"; cov "0.086262"; +chr1 Cufflinks exon 4763279 4766882 1000 - . gene_id "Mrpl15"; transcript_id "Mrpl15"; exon_number "1"; FPKM "9.1596238357"; frac "1.000000"; conf_lo "7.124003"; conf_hi "11.195245"; cov "0.520266"; +chr1 Cufflinks exon 4767606 4767729 1000 - . gene_id "Mrpl15"; transcript_id "Mrpl15"; exon_number "2"; FPKM "9.1596238357"; frac "1.000000"; conf_lo "7.124003"; conf_hi "11.195245"; cov "0.520266"; +chr1 Cufflinks exon 4772649 4772814 1000 - . gene_id "Mrpl15"; transcript_id "Mrpl15"; exon_number "3"; FPKM "9.1596238357"; frac "1.000000"; conf_lo "7.124003"; conf_hi "11.195245"; cov "0.520266"; +chr1 Cufflinks exon 4774032 4774186 1000 - . gene_id "Mrpl15"; transcript_id "Mrpl15"; exon_number "4"; FPKM "9.1596238357"; frac "1.000000"; conf_lo "7.124003"; conf_hi "11.195245"; cov "0.520266"; +chr1 Cufflinks exon 4775654 4775807 1000 - . gene_id "Mrpl15"; transcript_id "Mrpl15"; exon_number "5"; FPKM "9.1596238357"; frac "1.000000"; conf_lo "7.124003"; conf_hi "11.195245"; cov "0.520266";