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comparison test-data/genes.fpkm_tracking @ 10:4e6f043995ff draft

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/cuffdiff commit 4f5f0b9c6f52d17728d97452749b5dc887f7d46a
author devteam
date Wed, 03 Jun 2015 15:04:19 -0400
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9:db57b46b05bf 10:4e6f043995ff
1 tracking_id class_code nearest_ref_id gene_id gene_short_name tss_id locus length coverage q1_FPKM q1_conf_lo q1_conf_hi q1_status q2_FPKM q2_conf_lo q2_conf_hi q2_status
2 XLOC_000001 - - XLOC_000001 Xkr4 TSS1 chr1:3204754-3204833 - - 0 0 0 OK 9.45986e+06 0 3.33035e+07 OK
3 XLOC_000002 - - XLOC_000002 - TSS2 chr1:3111449-3111490 - - 0 0 0 OK 2.43637e+08 0 9.52723e+08 OK
4 XLOC_000003 - - XLOC_000003 - TSS3 chr1:3111545-3111576 - - 0 0 0 OK 0 0 0 OK
5 XLOC_000004 - - XLOC_000004 - TSS4 chr1:3174765-3174792 - - 0 0 0 OK 0 0 0 OK
6 XLOC_000005 - - XLOC_000005 - TSS5 chr1:3187401-3187428 - - 0 0 0 OK 0 0 0 OK
7 XLOC_000006 - - XLOC_000006 - TSS6 chr1:3188521-3188548 - - 0 0 0 OK 0 0 0 OK
8 XLOC_000007 - - XLOC_000007 - TSS7 chr1:3189810-3190789 - - 358326 135086 581565 OK 522345 410780 633911 OK
9 XLOC_000008 - - XLOC_000008 - TSS10 chr1:3190858-3191434 - - 408511 54526.1 762496 OK 420354 61509.1 779200 OK
10 XLOC_000009 - - XLOC_000009 - TSS11 chr1:3191512-3192077 - - 433286 63552.3 803020 OK 842157 342520 1.34179e+06 OK
11 XLOC_000010 - - XLOC_000010 - TSS13 chr1:3192250-3192336 - - 3.44151e+06 0 1.31756e+07 OK 3.34455e+06 0 1.30786e+07 OK
12 XLOC_000011 - - XLOC_000011 - TSS14 chr1:3192441-3192494 - - 0 0 0 OK 9.7002e+07 0 3.17699e+08 OK
13 XLOC_000012 - - XLOC_000012 - TSS15 chr1:3192550-3192629 - - 0 0 0 OK 4.72993e+06 0 1.84961e+07 OK
14 XLOC_000013 - - XLOC_000013 - TSS16 chr1:3192649-3192676 - - 0 0 0 OK 0 0 0 OK
15 XLOC_000014 - - XLOC_000014 - TSS17 chr1:3192731-3192811 - - 0 0 0 OK 0 0 0 OK
16 XLOC_000015 - - XLOC_000015 - TSS18 chr1:3192940-3193042 - - 0 0 0 OK 6.86386e+06 0 2.14243e+07 OK
17 XLOC_000016 - - XLOC_000016 - TSS19 chr1:3194185-3194226 - - 0 0 0 OK 2.43637e+08 0 9.52723e+08 OK
18 XLOC_000017 - - XLOC_000017 - TSS20 chr1:3194302-3194329 - - 0 0 0 OK 0 0 0 OK
19 XLOC_000018 - - XLOC_000018 - TSS21 chr1:3194706-3194733 - - 0 0 0 OK 0 0 0 OK
20 XLOC_000019 - - XLOC_000019 - TSS22 chr1:3195083-3195110 - - 0 0 0 OK 0 0 0 OK
21 XLOC_000020 - - XLOC_000020 - TSS23 chr1:3195450-3195477 - - 0 0 0 OK 0 0 0 OK
22 XLOC_000021 - - XLOC_000021 - TSS24 chr1:3197089-3197116 - - 0 0 0 OK 0 0 0 OK
23 XLOC_000022 - - XLOC_000022 - TSS25 chr1:3197246-3197273 - - 0 0 0 OK 0 0 0 OK
24 XLOC_000023 - - XLOC_000023 - TSS26 chr1:3197346-3197373 - - 0 0 0 OK 0 0 0 OK
25 XLOC_000024 - - XLOC_000024 - TSS27 chr1:3197425-3197452 - - 0 0 0 OK 0 0 0 OK
26 XLOC_000025 - - XLOC_000025 - TSS28 chr1:3200022-3200191 - - 826392 0 2.65361e+06 OK 803108 0 2.63033e+06 OK
27 XLOC_000026 - - XLOC_000026 - TSS29 chr1:3200325-3200352 - - 0 0 0 OK 0 0 0 OK
28 XLOC_000027 - - XLOC_000027 - TSS30 chr1:3200430-3200457 - - 0 0 0 OK 0 0 0 OK
29 XLOC_000028 - - XLOC_000028 - TSS31 chr1:3201007-3201039 - - 0 0 0 OK 0 0 0 OK
30 XLOC_000029 - - XLOC_000029 - TSS32 chr1:3201077-3201481 - - 66791.3 0 214473 OK 324548 0 802006 OK
31 XLOC_000030 - - XLOC_000030 - TSS33 chr1:3201596-3201666 - - 1.6359e+07 0 5.96409e+07 OK 0 0 0 OK
32 XLOC_000031 - - XLOC_000031 - TSS34 chr1:3201672-3201699 - - 0 0 0 OK 0 0 0 OK
33 XLOC_000032 - - XLOC_000032 - TSS35 chr1:3201725-3201809 - - 1.5136e+07 0 4.63396e+07 OK 0 0 0 OK
34 XLOC_000033 - - XLOC_000033 Xkr4 TSS36 chr1:3211521-3211561 - - 0 0 0 OK 0 0 0 OK
35 XLOC_000034 - - XLOC_000034 Xkr4 TSS37 chr1:3212213-3212292 - - 0 0 0 OK 9.45986e+06 0 3.33035e+07 OK
36 XLOC_000035 - - XLOC_000035 Xkr4 TSS38 chr1:3212367-3212439 - - 0 0 0 OK 2.80837e+07 0 8.76584e+07 OK
37 XLOC_000036 - - XLOC_000036 Xkr4 TSS39 chr1:3212717-3212801 - - 3.784e+06 0 1.44868e+07 OK 0 0 0 OK
38 XLOC_000037 - - XLOC_000037 Xkr4 TSS40 chr1:3213095-3213242 - - 5.10781e+06 0 1.69588e+07 OK 2.08209e+06 0 8.1421e+06 OK
39 XLOC_000038 - - XLOC_000038 Xkr4 TSS41 chr1:3240606-3240633 - - 0 0 0 OK 0 0 0 OK
40 XLOC_000039 - - XLOC_000039 Xkr4 TSS42 chr1:3242479-3242512 - - 0 0 0 OK 0 0 0 OK
41 XLOC_000040 - - XLOC_000040 Xkr4 TSS43 chr1:3242633-3242923 - - 48522.7 0 185766 OK 424400 0 1.30289e+06 OK
42 XLOC_000041 - - XLOC_000041 Xkr4 TSS44 chr1:3242924-3243005 - - 0 0 0 OK 0 0 0 OK
43 XLOC_000042 - - XLOC_000042 Xkr4 TSS45 chr1:3243018-3243079 - - 0 0 0 OK 3.03053e+07 0 1.0669e+08 OK
44 XLOC_000043 - - XLOC_000043 Xkr4 TSS46 chr1:3243108-3243154 - - 8.616e+07 0 3.29857e+08 OK 0 0 0 OK
45 XLOC_000044 - - XLOC_000044 Xkr4 TSS47 chr1:3243347-3243401 - - 0 0 0 OK 5.79991e+07 0 2.04186e+08 OK
46 XLOC_000045 - - XLOC_000045 Xkr4 TSS48 chr1:3254079-3254106 - - 0 0 0 OK 0 0 0 OK
47 XLOC_000046 - - XLOC_000046 Xkr4 TSS49 chr1:3256974-3257011 - - 0 0 0 OK 2.35423e+09 0 8.28806e+09 OK
48 XLOC_000047 - - XLOC_000047 Xkr4 TSS50 chr1:3277155-3277182 - - 0 0 0 OK 0 0 0 OK
49 XLOC_000048 - - XLOC_000048 Xkr4 TSS51 chr1:3277190-3277218 - - 0 0 0 OK 0 0 0 OK
50 XLOC_000049 - - XLOC_000049 Xkr4 TSS52 chr1:3277913-3278390 - - 228872 0 561229 OK 47662.2 0 156103 OK
51 XLOC_000050 - - XLOC_000050 Xkr4 TSS54 chr1:3280117-3280144 - - 0 0 0 OK 0 0 0 OK
52 XLOC_000051 - - XLOC_000051 Xkr4 TSS55 chr1:3280498-3280525 - - 0 0 0 OK 0 0 0 OK
53 XLOC_000052 - - XLOC_000052 Xkr4 TSS56 chr1:3280686-3280741 - - 0 0 0 OK 2.61334e+07 0 1.02193e+08 OK
54 XLOC_000053 - - XLOC_000053 Xkr4 TSS57 chr1:3282504-3282531 - - 0 0 0 OK 0 0 0 OK
55 XLOC_000054 - - XLOC_000054 Xkr4 TSS58 chr1:3282650-3282677 - - 0 0 0 OK 0 0 0 OK
56 XLOC_000055 - - XLOC_000055 Xkr4 TSS59 chr1:3282760-3282832 - - 0 0 0 OK 0 0 0 OK
57 XLOC_000056 - - XLOC_000056 Xkr4 TSS60 chr1:3284966-3284993 - - 0 0 0 OK 0 0 0 OK
58 XLOC_000057 - - XLOC_000057 Xkr4 TSS61 chr1:3290488-3290553 - - 0 0 0 OK 1.11503e+07 0 4.36026e+07 OK
59 XLOC_000058 - - XLOC_000058 Xkr4 TSS62 chr1:3290798-3290859 - - 1.55919e+07 0 5.96926e+07 OK 0 0 0 OK
60 XLOC_000059 - - XLOC_000059 Xkr4 TSS63 chr1:3290919-3291273 - - 294879 0 740137 OK 85971.3 0 281572 OK
61 XLOC_000060 - - XLOC_000060 Xkr4 TSS65,TSS66 chr1:3299443-3299664 - - 807732 0 2.39786e+06 OK 156995 0 641748 OK
62 XLOC_000061 - - XLOC_000061 Xkr4 TSS67 chr1:3299691-3299733 - - 0 0 0 OK 0 0 0 OK
63 XLOC_000062 - - XLOC_000062 Xkr4 TSS68 chr1:3300051-3300078 - - 0 0 0 OK 0 0 0 OK
64 XLOC_000063 - - XLOC_000063 Xkr4 TSS69 chr1:3307748-3307775 - - 0 0 0 OK 0 0 0 OK
65 XLOC_000064 - - XLOC_000064 Xkr4 TSS70 chr1:3318620-3318647 - - 0 0 0 OK 0 0 0 OK
66 XLOC_000065 - - XLOC_000065 Xkr4 TSS71 chr1:3318999-3319051 - - 0 0 0 OK 0 0 0 OK
67 XLOC_000066 - - XLOC_000066 Xkr4 TSS72 chr1:3330527-3330554 - - 0 0 0 OK 0 0 0 OK
68 XLOC_000067 - - XLOC_000067 Xkr4 TSS73 chr1:3351240-3351311 - - 7.68169e+06 0 2.94088e+07 OK 0 0 0 OK
69 XLOC_000068 - - XLOC_000068 Xkr4 TSS74 chr1:3355887-3356119 - - 504790 0 1.59712e+06 OK 0 0 0 OK
70 XLOC_000069 - - XLOC_000069 Xkr4 TSS75 chr1:3356180-3356225 - - 1.02717e+08 0 3.93246e+08 OK 0 0 0 OK
71 XLOC_000070 - - XLOC_000070 Xkr4 TSS76 chr1:3363076-3363176 - - 3.81001e+06 0 1.38903e+07 OK 0 0 0 OK
72 XLOC_000071 - - XLOC_000071 Xkr4 TSS77 chr1:3363214-3363278 - - 0 0 0 OK 0 0 0 OK
73 XLOC_000072 - - XLOC_000072 Xkr4 TSS78 chr1:3363387-3363446 - - 5.53654e+07 0 1.77783e+08 OK 0 0 0 OK
74 XLOC_000073 - - XLOC_000073 Xkr4 TSS79 chr1:3363753-3363849 - - 0 0 0 OK 0 0 0 OK
75 XLOC_000074 - - XLOC_000074 Xkr4 TSS80 chr1:3364871-3364919 - - 6.28966e+07 0 2.40795e+08 OK 0 0 0 OK
76 XLOC_000075 - - XLOC_000075 Xkr4 TSS81 chr1:3367135-3367162 - - 0 0 0 OK 0 0 0 OK
77 XLOC_000076 - - XLOC_000076 Xkr4 TSS82 chr1:3367210-3367237 - - 0 0 0 OK 0 0 0 OK
78 XLOC_000077 - - XLOC_000077 Xkr4 TSS83 chr1:3367333-3367382 - - 0 0 0 OK 0 0 0 OK
79 XLOC_000078 - - XLOC_000078 Xkr4 TSS84 chr1:3369580-3369607 - - 0 0 0 OK 0 0 0 OK
80 XLOC_000079 - - XLOC_000079 Xkr4 TSS85 chr1:3375001-3375028 - - 0 0 0 OK 0 0 0 OK
81 XLOC_000080 - - XLOC_000080 Xkr4 TSS86 chr1:3377211-3377262 - - 0 0 0 OK 0 0 0 OK
82 XLOC_000081 - - XLOC_000081 Xkr4 TSS87 chr1:3379888-3379915 - - 0 0 0 OK 0 0 0 OK
83 XLOC_000082 - - XLOC_000082 Xkr4 TSS88 chr1:3386739-3386836 - - 0 0 0 OK 0 0 0 OK
84 XLOC_000083 - - XLOC_000083 Xkr4 TSS89 chr1:3391325-3391352 - - 0 0 0 OK 0 0 0 OK
85 XLOC_000084 - - XLOC_000084 Xkr4 TSS90 chr1:3435841-3435880 - - 0 0 0 OK 0 0 0 OK
86 XLOC_000085 - - XLOC_000085 Xkr4 TSS91 chr1:3447761-3447788 - - 0 0 0 OK 0 0 0 OK
87 XLOC_000086 - - XLOC_000086 Xkr4 TSS92 chr1:3450906-3450965 - - 0 0 0 OK 0 0 0 OK
88 XLOC_000087 - - XLOC_000087 Xkr4 TSS93 chr1:3451051-3451109 - - 0 0 0 OK 0 0 0 OK