# HG changeset patch
# User iuc
# Date 1638007091 0
# Node ID 43221aef70e23f33169c29f5e5780b9668ddfd56
# Parent  af3e173cad7f6a0c3df0cb55626368f099e0dfc7
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/cufflinks/cuffdiff commit 0e1d7660ab8ccb677b4f79207f5bc78097640f04"

diff -r af3e173cad7f -r 43221aef70e2 cuffdiff_wrapper.xml
--- a/cuffdiff_wrapper.xml	Fri Jul 03 11:43:55 2020 -0400
+++ b/cuffdiff_wrapper.xml	Sat Nov 27 09:58:11 2021 +0000
@@ -283,7 +283,6 @@
             <param name="fdr" value="0.05" />
             <param name="min_alignment_count" value="0" />
             <param name="do_bias_correction" value="No" />
-            <param name="do_normalization" value="No" />
             <param name="multiread_correct" value="No"/>
             <param name="sAdditional" value="No"/>
             <output name="output_cummerbund" ftype="sqlite" file="cuffdiff_out.sqlite" compare="sim_size" />
@@ -308,7 +307,6 @@
             <param name="fdr" value="0.05" />
             <param name="min_alignment_count" value="0" />
             <param name="do_bias_correction" value="No" />
-            <param name="do_normalization" value="No" />
             <param name="multiread_correct" value="No"/>
             <param name="sAdditional" value="No"/>
             <output name="output_cummerbund" ftype="sqlite" file="cuffdiff_out.sqlite" compare="sim_size" />
@@ -333,7 +331,6 @@
             <param name="fdr" value="0.05" />
             <param name="min_alignment_count" value="0" />
             <param name="do_bias_correction" value="No" />
-            <param name="do_normalization" value="No" />
             <param name="multiread_correct" value="No"/>
             <param name="sAdditional" value="No"/>
             <output name="splicing_diff" file="splicing.diff"/>