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comparison cuffmerge_wrapper.xml @ 8:5543c3d33e26

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Convert tool to use $GALAXY_SLOTS if available.
author Nate Coraor <nate@bx.psu.edu>
date Thu, 16 Jan 2014 13:14:19 -0500
parents 68eaaae05c51
children 424d49834830
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7:25b0f2f2c506 8:5543c3d33e26
5 <requirement type="package" version="2.1.1">cufflinks</requirement> 5 <requirement type="package" version="2.1.1">cufflinks</requirement>
6 </requirements> 6 </requirements>
7 <command interpreter="python"> 7 <command interpreter="python">
8 cuffmerge_wrapper.py 8 cuffmerge_wrapper.py
9 9
10 --num-threads="4" 10 --num-threads="\${GALAXY_SLOTS:-4}"
11 11
12 ## Use annotation reference? 12 ## Use annotation reference?
13 #if $annotation.use_ref_annotation == "Yes": 13 #if $annotation.use_ref_annotation == "Yes":
14 -g $annotation.reference_annotation 14 -g $annotation.reference_annotation
15 #end if 15 #end if