Mercurial > repos > devteam > cuffmerge

diff cuffmerge_wrapper.xml @ 8:5543c3d33e26

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Convert tool to use $GALAXY_SLOTS if available.
author Nate Coraor <nate@bx.psu.edu>
date Thu, 16 Jan 2014 13:14:19 -0500
parents 68eaaae05c51
children 424d49834830
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--- a/cuffmerge_wrapper.xml	Thu Jan 09 14:28:28 2014 -0500
+++ b/cuffmerge_wrapper.xml	Thu Jan 16 13:14:19 2014 -0500
@@ -7,7 +7,7 @@
     <command interpreter="python">
         cuffmerge_wrapper.py
         
-            --num-threads="4"
+            --num-threads="\${GALAXY_SLOTS:-4}"
             
             ## Use annotation reference?
             #if $annotation.use_ref_annotation == "Yes":