Mercurial > repos > devteam > cuffnorm

diff cuffnorm_wrapper.xml @ 5:9a854107dbb2 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/cufflinks/cuffnorm commit 6b66cbbde16c35593fe95066ea2b91623bf35140"
author iuc
date Fri, 03 Jul 2020 11:44:40 -0400
parents 6cbfede05833
children
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--- a/cuffnorm_wrapper.xml	Tue Jun 16 13:01:30 2020 -0400
+++ b/cuffnorm_wrapper.xml	Fri Jul 03 11:44:40 2020 -0400
@@ -1,4 +1,4 @@
-<tool id="cuffnorm" name="Cuffnorm" version="@VERSION@.2">
+<tool id="cuffnorm" name="Cuffnorm" version="@VERSION@.3">
     <description>Create normalized expression levels</description>
     <macros>
       <import>cuff_macros.xml</import>
@@ -210,7 +210,7 @@
 
 **Input format**
 
-Cuffdiff takes Cufflinks or Cuffcompare GTF files as input along with two SAM files containing the fragment alignments for two or more samples.
+Cuffnorm takes Cufflinks or Cuffcompare GTF files as input along with two SAM files containing the fragment alignments for two or more samples.
 
 ------
 
@@ -223,15 +223,9 @@
     
 -------
 
-**Settings**
-
-All of the options have a default value. You can change any of them. Most of the options in Cuffdiff have been implemented here.
+**Parameter list**
 
-------
-
-**Cuffdiff parameter list**
-
-This is a list of implemented Cuffdiff options::
+This is a list of implemented Cuffnorm options::
 
   --library-norm-method          Library Normalization method : Geometric (default), classic-fpkm, quartile
   --library-type                 ff-firststrand,ff-secondstrand,ff-unstranded,fr-firstrand,fr-secondstrand,fr-unstranded,transfrags