Mercurial > repos > devteam > cuffquant
diff cuffquant_wrapper.xml @ 4:679d93c99757 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/cufflinks/cuffquant commit a0b0845a9d1b3e7ecdeacd1e606133617e3918bd"
author | iuc |
---|---|
date | Tue, 16 Jun 2020 13:01:50 -0400 |
parents | 6dc45faebc1d |
children | 93148c05136f |
line wrap: on
line diff
--- a/cuffquant_wrapper.xml Sun Feb 19 12:09:41 2017 -0500 +++ b/cuffquant_wrapper.xml Tue Jun 16 13:01:50 2020 -0400 @@ -5,7 +5,7 @@ <import>cuff_macros.xml</import> </macros> <expand macro="requirements" /> - <version_command>cuffquant 2>&1 | head -n 1</version_command> + <version_command><![CDATA[cuffquant 2>&1 | head -n 1]]></version_command> <command detect_errors="aggressive"><![CDATA[ cuffquant --no-update-check @@ -211,7 +211,5 @@ --mask-file (gff3/gtf) Ignore all alignment within transcripts in this file --max-bundle-frags Sets the maximum number of fragments a locus may have before being skipped. Skipped loci are listed in skipped.gtf. </help> - <citations> - <citation type="doi">10.1038/nbt.1621</citation> - </citations> + <expand macro="citations"/> </tool>