Mercurial > repos > devteam > cummerbund_to_tabular

comparison cummerbund_to_tabular.xml @ 1:36f917aa4b60 draft

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Uploaded corrected script
author devteam
date Mon, 16 Mar 2015 15:43:38 -0400
parents 648c27c78eed
children 0761bbc0a4e7
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0:648c27c78eed 1:36f917aa4b60
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool id="cummerbund_to_cuffdiff" name="Extract CuffDiff" version="1.0.0"> 2 <tool id="cummerbund_to_cuffdiff" name="Extract CuffDiff" version="1.0.1">
3 <description>tabular files from a cummeRbund database</description> 3 <description>tabular files from a cummeRbund database</description>
4 <command interpreter="python"><![CDATA[ 4 <command interpreter="python"><![CDATA[
5 cummerbund_to_tabular.py --file ${input_database} 5 cummerbund_to_tabular.py --file ${input_database}
6 ${cds_count} ${cds_diff} ${cds_exp_diff} ${cds_fpkm} ${cds_rg} 6 ${cds_count} ${cds_diff} ${cds_exp_diff} ${cds_fpkm} ${cds_rg}
7 ${gene_exp_diff} ${genes_count} ${genes_fpkm} ${gene_rg} ${isoform_exp_diff} 7 ${gene_exp_diff} ${genes_count} ${genes_fpkm} ${gene_rg} ${isoform_exp_diff}