Mercurial > repos > devteam > data_manager_bowtie2_index_builder

comparison data_manager/bowtie2_index_builder.xml @ 5:115f3e61b012 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 47a185ef4aba48923d64570f94a3a7a52d6b41e6"
author iuc
date Wed, 04 Dec 2019 16:12:18 -0500
parents d1d5feb31804
children 847c9ef56a52
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4:d1d5feb31804 5:115f3e61b012
1 <tool id="bowtie2_index_builder_data_manager" name="Bowtie2 index" tool_type="manage_data" version="@WRAPPER_VERSION@" profile="18.09"> 1 <tool id="bowtie2_index_builder_data_manager" name="Bowtie2 index" tool_type="manage_data" version="@WRAPPER_VERSION@" profile="18.09">
2 <description>builder</description> 2 <description>builder</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="@WRAPPER_VERSION@">bowtie2</requirement> 4 <requirement type="package" version="@WRAPPER_VERSION@">bowtie2</requirement>
5 <requirement type="package" version="3.7">python</requirement>
5 </requirements> 6 </requirements>
6 <macros> 7 <macros>
7 <token name="@WRAPPER_VERSION@">2.3.4.3</token> 8 <token name="@WRAPPER_VERSION@">2.3.5.1</token>
8 </macros> 9 </macros>
9 <command detect_errors="exit_code"><![CDATA[ 10 <command detect_errors="exit_code"><![CDATA[
10 python '$__tool_directory__/bowtie2_index_builder.py' 11 python '$__tool_directory__/bowtie2_index_builder.py'
11 '${out_file}' 12 '${out_file}'
12 --fasta_filename '${all_fasta_source.fields.path}' 13 --fasta_filename '${all_fasta_source.fields.path}'