Mercurial > repos > devteam > data_manager_bowtie2_index_builder
diff data_manager_conf.xml @ 12:6754002631cd draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit e5971e34b23280f7c3d6291a03325b6dd47e3fdd
| author | iuc |
|---|---|
| date | Sat, 16 Aug 2025 14:35:19 +0000 |
| parents | 39865c64a4e1 |
| children |
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--- a/data_manager_conf.xml Thu Dec 05 06:48:52 2024 +0000 +++ b/data_manager_conf.xml Sat Aug 16 14:35:19 2025 +0000 @@ -11,7 +11,7 @@ <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base --> <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">genomes/${dbkey}/bowtie_index/v2/${value}</target> </move> - <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/genomes/${dbkey}/bowtie_index/v2/${value}/${path}</value_translation> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/genomes/${dbkey}/bowtie_index/v2/${value}/${value}</value_translation> <value_translation type="function">abspath</value_translation> </column> </output> @@ -24,7 +24,7 @@ <column name="name" /> <column name="path" output_ref="out_file" > <!-- no move, always happens as part of bowtie2 and uses that path --> - <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/genomes/${dbkey}/bowtie_index/v2/${value}/${path}</value_translation> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/genomes/${dbkey}/bowtie_index/v2/${value}/${value}</value_translation> <value_translation type="function">abspath</value_translation> </column> </output>