Mercurial > repos > devteam > data_manager_sam_fasta_index_builder

comparison data_manager/data_manager_sam_fasta_index_builder.xml @ 4:1865e693d8b2 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sam_fasta_index_builder commit 471c497769f0dbfa92ec1a91f4044062cb5f7a83-dirty
author iuc
date Thu, 14 Sep 2017 15:30:56 -0400
parents 1f54e98616af
children cc4ef4d38cf9
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3:1f54e98616af 4:1865e693d8b2
1 <tool id="sam_fasta_index_builder" name="SAM FASTA index" tool_type="manage_data" version="0.0.2"> 1 <tool id="sam_fasta_index_builder" name="SAM FASTA index" tool_type="manage_data" version="0.0.2">
2 <description>builder</description> 2 <description>builder</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.1.19">samtools</requirement> 4 <requirement type="package" version="1.5">samtools</requirement>
5 </requirements> 5 </requirements>
6 <command detect_errors="exit_code"><![CDATA[ 6 <command detect_errors="exit_code"><![CDATA[
7 python '$__tool_directory__/data_manager_sam_fasta_index_builder.py' 7 python '$__tool_directory__/data_manager_sam_fasta_index_builder.py'
8 '${out_file}' 8 '${out_file}'
9 --fasta_filename '${all_fasta_source.fields.path}' 9 --fasta_filename '${all_fasta_source.fields.path}'