Mercurial > repos > devteam > data_manager_sam_fasta_index_builder
comparison data_manager/data_manager_sam_fasta_index_builder.xml @ 6:f8418a1bf7d0 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sam_fasta_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
author | iuc |
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date | Thu, 28 Nov 2019 15:48:23 -0500 |
parents | cc4ef4d38cf9 |
children | 3ec5c51384e6 |
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5:cc4ef4d38cf9 | 6:f8418a1bf7d0 |
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1 <tool id="sam_fasta_index_builder" name="SAM FASTA index" tool_type="manage_data" version="0.0.3" profile="19.05"> | 1 <tool id="sam_fasta_index_builder" name="SAM FASTA index" tool_type="manage_data" version="0.0.4" profile="19.05"> |
2 <description>builder</description> | 2 <description>builder</description> |
3 <requirements> | 3 <requirements> |
4 <requirement type="package" version="1.9">samtools</requirement> | 4 <requirement type="package" version="1.9">samtools</requirement> |
5 <requirement type="package" version="3.7">python</requirement> | |
5 </requirements> | 6 </requirements> |
6 <command detect_errors="exit_code"><![CDATA[ | 7 <command detect_errors="exit_code"><![CDATA[ |
7 python '$__tool_directory__/data_manager_sam_fasta_index_builder.py' | 8 python '$__tool_directory__/data_manager_sam_fasta_index_builder.py' |
8 '${out_file}' | 9 '${out_file}' |
9 --fasta_filename '${all_fasta_source.fields.path}' | 10 --fasta_filename '${all_fasta_source.fields.path}' |