# HG changeset patch # User devteam # Date 1380119076 14400 # Node ID f16000dc644b519631f1f6a3edbd92bc44fa2de1 Uploaded tool tarball. diff -r 000000000000 -r f16000dc644b delete_overlapping_indels.pl --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/delete_overlapping_indels.pl Wed Sep 25 10:24:36 2013 -0400 @@ -0,0 +1,94 @@ +#!/usr/bin/perl -w + +# This program detects overlapping indels in a chromosome and keeps all non-overlapping indels. As for overlapping indels, +# the first encountered one is kept and all others are removed. It requires three inputs: +# The first input is a TABULAR format file containing coordinates of indels in blocks extracted from multi-alignment. +# The second input is an integer number representing the number of the column where indel start coordinates are stored in the input file. +# The third input is an integer number representing the number of the column where indel end coordinates are stored in the input file. +# The output is a TABULAR format file containing all non-overlapping indels in the input file, and the first encountered indel of overlapping ones. +# Note: The number of the first column is 1. + +use strict; +use warnings; + +#varaibles to handle information related to indels +my $indel1 = ""; +my $indel2 = ""; +my @indelArray1 = (); +my @indelArray2 = (); +my $lineCounter1 = 0; +my $lineCounter2 = 0; +my $totalNumberofNonOverlappingIndels = 0; + +# check to make sure having correct files +my $usage = "usage: delete_overlapping_indels.pl [TABULAR.in] [indelStartColumn] [indelEndColumn] [TABULAR.out]\n"; +die $usage unless @ARGV == 4; + +my $inputFile = $ARGV[0]; +my $indelStartColumn = $ARGV[1] - 1; +my $indelEndColumn = $ARGV[2] - 1; +my $outputFile = $ARGV[3]; + +#verifie column numbers +if ($indelStartColumn < 0 ){ + die ("The indel start column number is invalid \n"); +} +if ($indelEndColumn < 0 ){ + die ("The indel end column number is invalid \n"); +} + +#open the input and output files +open (INPUT, "<", $inputFile) || die ("Could not open file $inputFile \n"); +open (OUTPUT, ">", $outputFile) || die ("Could not open file $outputFile \n"); + +#store the input file in the array @rawData +my @indelsRawData = ; + +#iterated through the indels of the input file +INDEL1: +foreach $indel1 (@indelsRawData){ + chomp ($indel1); + $lineCounter1++; + + #get the first indel + @indelArray1 = split(/\t/, $indel1); + + #our purpose is to detect overlapping indels and to store one copy of them only in the output file + #all other non-overlapping indels will stored in the output file also + + $lineCounter2 = 0; + + #iterated through the indels of the input file + INDEL2: + foreach $indel2 (@indelsRawData){ + chomp ($indel2); + $lineCounter2++; + + if ($lineCounter2 > $lineCounter1){ + #get the second indel + @indelArray2 = split(/\t/, $indel2); + + #check if the two indels are overlapping + if (($indelArray2[$indelEndColumn] >= $indelArray1[$indelStartColumn] && $indelArray2[$indelEndColumn] <= $indelArray1[$indelEndColumn]) || ($indelArray2[$indelStartColumn] >= $indelArray1[$indelStartColumn] && $indelArray2[$indelStartColumn] <= $indelArray1[$indelEndColumn])){ + #print ("There is an overlap between" . "\n" . $indel1 . "\n" . $indel2 . "\n"); + #print("The two overlapping indels are located at the lines: " . $lineCounter1 . " " . $lineCounter2 . "\n\n"); + + #break out of the loop and go back to the outerloop + next INDEL1; + } + else{ + #print("The two non-overlaapping indels are located at the lines: " . $lineCounter1 . " " . $lineCounter2 . "\n"); + } + } + } + + print OUTPUT $indel1 . "\n"; + $totalNumberofNonOverlappingIndels++; +} + +#print("The total number of indels is: " . $lineCounter1 . "\n"); +#print("The total number of non-overlapping indels is: " . $totalNumberofNonOverlappingIndels . "\n"); + +#close the input and output files +close(OUTPUT); +close(INPUT); \ No newline at end of file diff -r 000000000000 -r f16000dc644b delete_overlapping_indels.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/delete_overlapping_indels.xml Wed Sep 25 10:24:36 2013 -0400 @@ -0,0 +1,66 @@ + + from a chromosome indels file + + + delete_overlapping_indels.pl $inputFile1 $inputIndelStartColumnNumber2 $inputIndelEndColumnNumber3 $outputFile1 + + + + + + + + + + + + + + + + + + + + + + + +.. class:: infomark + +**What it does** + +This program detects overlapping indels in a chromosome and keeps all non-overlapping indels. As for overlapping indels, the first encountered one is kept and all others are removed. +It requires three inputs: + +- The first input is a TABULAR format file containing coordinates of indels in blocks extracted from multi-alignment. +- The second input is an integer number representing the number of the column where indel start coordinates are stored in the input file. +- The third input is an integer number representing the number of the column where indel end coordinates are stored in the input file. +- The output is a TABULAR format file containing all non-overlapping indels in the input file, and the first encountered indel of overlapping ones. + +Note: The number of the first column is 1. + + +**Example** + +Let us have the following insertions in the human genome. The start and end coordinates of insertions are on columns 5 and 6 respectively:: + + 3 hg18.chr22_insert 3 hg18.chr22 14508610 14508612 3924 - panTro2.chr2b 132518950 132518951 3910 + rheMac2.chr17 14311798 14311799 3896 + + 7 hg18.chr22_insert 13 hg18.chr22 14513678 14513690 348 - panTro2.chr2b 132517876 132517877 321 + rheMac2.chr17 14274462 14274463 337 + + 7 hg18.chr22_insert 6 hg18.chr22 14513688 14513699 348 - panTro2.chr2b 132517879 132517880 321 + rheMac2.chr17 14274465 14274466 337 + + 25 hg18.chr22_insert 9 hg18.chr22 14529501 14529509 385 - panTro2.chr22 14528775 14528776 376 - rheMac2.chr9 42869449 42869450 375 - + 36 hg18.chr22_insert 4 hg18.chr22 14566316 14566319 540 - panTro2.chr2b 132492077 132492078 533 + rheMac2.chr10 59230438 59230439 533 - + 40 hg18.chr22_insert 7 hg18.chr22 14508610 14508616 2337 - panTro2.chr2b 132487750 132487751 2313 + rheMac2.chr10 59128305 59128306 2332 + + 41 hg18.chr22_insert 4 hg18.chr22 14571556 14571559 2483 - panTro2.chr2b 132485878 132485879 2481 + rheMac2.chr10 59126094 59126095 2508 + + +By removing the overlapping indels which, we get:: + + 3 hg18.chr22_insert 3 hg18.chr22 14508610 14508612 3924 - panTro2.chr2b 132518950 132518951 3910 + rheMac2.chr17 14311798 14311799 3896 + + 7 hg18.chr22_insert 13 hg18.chr22 14513678 14513690 348 - panTro2.chr2b 132517876 132517877 321 + rheMac2.chr17 14274462 14274463 337 + + 25 hg18.chr22_insert 9 hg18.chr22 14529501 14529509 385 - panTro2.chr22 14528775 14528776 376 - rheMac2.chr9 42869449 42869450 375 - + 36 hg18.chr22_insert 4 hg18.chr22 14566316 14566319 540 - panTro2.chr2b 132492077 132492078 533 + rheMac2.chr10 59230438 59230439 533 - + 41 hg18.chr22_insert 4 hg18.chr22 14571556 14571559 2483 - panTro2.chr2b 132485878 132485879 2481 + rheMac2.chr10 59126094 59126095 2508 + + + + + \ No newline at end of file diff -r 000000000000 -r f16000dc644b test-data/indels1.tabular --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/indels1.tabular Wed Sep 25 10:24:36 2013 -0400 @@ -0,0 +1,999 @@ +3 hg18.chr22_insert 3 hg18.chr22 14508610 14508612 3924 - panTro2.chr2b 132518950 132518951 3910 + rheMac2.chr17 14311798 14311799 3896 + +7 hg18.chr22_insert 13 hg18.chr22 14513678 14513690 348 - panTro2.chr2b 132517876 132517877 321 + rheMac2.chr17 14274462 14274463 337 + +7 hg18.chr22_insert 6 hg18.chr22 14513694 14513699 348 - panTro2.chr2b 132517879 132517880 321 + rheMac2.chr17 14274465 14274466 337 + +25 hg18.chr22_insert 9 hg18.chr22 14529501 14529509 385 - panTro2.chr22 14528775 14528776 376 - rheMac2.chr9 42869449 42869450 375 - +36 hg18.chr22_insert 4 hg18.chr22 14566316 14566319 540 - panTro2.chr2b 132492077 132492078 533 + rheMac2.chr10 59230438 59230439 533 - +40 hg18.chr22_insert 7 hg18.chr22 14568610 14568616 2337 - panTro2.chr2b 132487750 132487751 2313 + rheMac2.chr10 59128305 59128306 2332 + +41 hg18.chr22_insert 4 hg18.chr22 14571556 14571559 2483 - panTro2.chr2b 132485878 132485879 2481 + rheMac2.chr10 59126094 59126095 2508 + +42 hg18.chr22_insert 9 hg18.chr22 14529501 14529509 385 - panTro2.chr22 14528775 14528776 376 - rheMac2.chr9 42869449 42869450 375 - +53 hg18.chr22_insert 4 hg18.chr22 14566316 14566319 540 - panTro2.chr2b 132492077 132492078 533 + rheMac2.chr10 59230438 59230439 533 - +57 hg18.chr22_insert 7 hg18.chr22 14568610 14568616 2337 - panTro2.chr2b 132487750 132487751 2313 + rheMac2.chr10 59128305 59128306 2332 + +58 hg18.chr22_insert 4 hg18.chr22 14571556 14571559 2483 - panTro2.chr2b 132485878 132485879 2481 + rheMac2.chr10 59126094 59126095 2508 + +59 hg18.chr22_insert 9 hg18.chr22 14529501 14529509 385 - panTro2.chr22 14528775 14528776 376 - rheMac2.chr9 42869449 42869450 375 - +70 hg18.chr22_insert 4 hg18.chr22 14566316 14566319 540 - panTro2.chr2b 132492077 132492078 533 + rheMac2.chr10 59230438 59230439 533 - +74 hg18.chr22_insert 7 hg18.chr22 14568610 14568616 2337 - panTro2.chr2b 132487750 132487751 2313 + rheMac2.chr10 59128305 59128306 2332 + +75 hg18.chr22_insert 4 hg18.chr22 14571556 14571559 2483 - panTro2.chr2b 132485878 132485879 2481 + rheMac2.chr10 59126094 59126095 2508 + +78 hg18.chr22_insert 7 hg18.chr22 14568610 14568616 2337 - panTro2.chr2b 132487750 132487751 2313 + rheMac2.chr10 59128305 59128306 2332 + +79 hg18.chr22_insert 4 hg18.chr22 14571556 14571559 2483 - panTro2.chr2b 132485878 132485879 2481 + rheMac2.chr10 59126094 59126095 2508 + +146 hg18.chr22_insert 4 hg18.chr22 15463934 15463937 1312 + panTro2.chr22 15489863 15489864 1316 + rheMac2.chr3 189373988 189373989 1293 - +146 hg18.chr22_insert 1 hg18.chr22 15464673 15464673 1312 + panTro2.chr22 15490601 15490602 1316 + rheMac2.chr3 189374723 189374724 1293 - +147 hg18.chr22_insert 3 hg18.chr22 15465019 15465021 383 + panTro2.chr22 15490952 15490953 380 + rheMac2.chr3 189373378 189373379 383 - +150 hg18.chr22_insert 4 hg18.chr22 15463934 15463937 1312 + panTro2.chr22 15489863 15489864 1316 + rheMac2.chr3 189373988 189373989 1293 - +150 hg18.chr22_insert 1 hg18.chr22 15464673 15464673 1312 + panTro2.chr22 15490601 15490602 1316 + rheMac2.chr3 189374723 189374724 1293 - +151 hg18.chr22_insert 3 hg18.chr22 15465019 15465021 383 + panTro2.chr22 15490952 15490953 380 + rheMac2.chr3 189373378 189373379 383 - +154 hg18.chr22_insert 4 hg18.chr22 15463934 15463937 1312 + panTro2.chr22 15489863 15489864 1316 + rheMac2.chr3 189373988 189373989 1293 - +154 hg18.chr22_insert 1 hg18.chr22 15464673 15464673 1312 + panTro2.chr22 15490601 15490602 1316 + rheMac2.chr3 189374723 189374724 1293 - +155 hg18.chr22_insert 3 hg18.chr22 15465019 15465021 383 + panTro2.chr22 15490952 15490953 380 + rheMac2.chr3 189373378 189373379 383 - +170 hg18.chr22_insert 1 hg18.chr22 15496632 15496632 1729 + panTro2.chr22 15522543 15522544 1743 + rheMac2.chr17 1913545 1913546 1713 + +177 hg18.chr22_insert 1 hg18.chr22 15501698 15501698 1109 + panTro2.chr22 15527594 15527595 1112 + rheMac2.chr17 1918808 1918809 1113 + +178 hg18.chr22_insert 1 hg18.chr22 15504574 15504574 1070 + panTro2.chr22 15530477 15530478 1063 + rheMac2.chr17 1979571 1979572 1086 + +182 hg18.chr22_insert 4 hg18.chr22 15463934 15463937 1312 + panTro2.chr22 15489863 15489864 1316 + rheMac2.chr3 189373988 189373989 1293 - +182 hg18.chr22_insert 1 hg18.chr22 15464673 15464673 1312 + panTro2.chr22 15490601 15490602 1316 + rheMac2.chr3 189374723 189374724 1293 - +183 hg18.chr22_insert 3 hg18.chr22 15465019 15465021 383 + panTro2.chr22 15490952 15490953 380 + rheMac2.chr3 189373378 189373379 383 - +198 hg18.chr22_insert 1 hg18.chr22 15496632 15496632 1729 + panTro2.chr22 15522543 15522544 1743 + rheMac2.chr17 1913545 1913546 1713 + +205 hg18.chr22_insert 1 hg18.chr22 15501698 15501698 1109 + panTro2.chr22 15527594 15527595 1112 + rheMac2.chr17 1918808 1918809 1113 + +206 hg18.chr22_insert 1 hg18.chr22 15504574 15504574 1070 + panTro2.chr22 15530477 15530478 1063 + rheMac2.chr17 1979571 1979572 1086 + +208 hg18.chr22_insert 20 hg18.chr22 15513449 15513468 3051 + panTro2.chr22 15539372 15539373 3032 + rheMac2.chr17 4988819 4988820 3045 - +208 hg18.chr22_insert 1 hg18.chr22 15516316 15516316 3051 + panTro2.chr22 15542224 15542225 3032 + rheMac2.chr17 4991673 4991674 3045 - +229 hg18.chr22_insert 1 hg18.chr22 15496632 15496632 1729 + panTro2.chr22 15522543 15522544 1743 + rheMac2.chr17 1913545 1913546 1713 + +236 hg18.chr22_insert 1 hg18.chr22 15501698 15501698 1109 + panTro2.chr22 15527594 15527595 1112 + rheMac2.chr17 1918808 1918809 1113 + +237 hg18.chr22_insert 1 hg18.chr22 15504574 15504574 1070 + panTro2.chr22 15530477 15530478 1063 + rheMac2.chr17 1979571 1979572 1086 + +239 hg18.chr22_insert 20 hg18.chr22 15513449 15513468 1269 + panTro2.chr22 15539372 15539373 1255 + rheMac2.chr17 4990610 4990611 1254 - +290 hg18.chr22_insert 3 hg18.chr22 15834580 15834582 1490 - panTro2.chr22 15833380 15833381 1504 - rheMac2.chr10 61474725 61474726 1523 - +292 hg18.chr22_insert 1 hg18.chr22 15836034 15836034 8236 - panTro2.chr22 15834836 15834837 8244 - rheMac2.chr10 61476205 61476206 8252 - +292 hg18.chr22_insert 1 hg18.chr22 15838182 15838182 8236 - panTro2.chr22 15837004 15837005 8244 - rheMac2.chr10 61478382 61478383 8252 - +292 hg18.chr22_insert 1 hg18.chr22 15842483 15842483 8236 - panTro2.chr22 15841305 15841306 8244 - rheMac2.chr10 61482691 61482692 8252 - +292 hg18.chr22_insert 3 hg18.chr22 15842885 15842887 8236 - panTro2.chr22 15841706 15841707 8244 - rheMac2.chr10 61483067 61483068 8252 - +292 hg18.chr22_insert 2 hg18.chr22 15843275 15843276 8236 - panTro2.chr22 15842093 15842094 8244 - rheMac2.chr10 61483470 61483471 8252 - +316 hg18.chr22_insert 1 hg18.chr22 15851529 15851529 404 - panTro2.chr22 15850534 15850535 403 - rheMac2.chr10 61491590 61491591 403 - +326 hg18.chr22_insert 3 hg18.chr22 15852285 15852287 121 - panTro2.chr22 15851289 15851290 125 - rheMac2.chr10 61492341 61492342 120 - +341 hg18.chr22_insert 1 hg18.chr22 15865920 15865920 2420 - panTro2.chr22 15867042 15867043 2404 - rheMac2.chr10 61507277 61507278 2513 - +343 hg18.chr22_insert 4 hg18.chr22 15868291 15868294 384 - panTro2.chr22 15869397 15869398 378 - rheMac2.chr10 61510064 61510065 377 - +375 hg18.chr22_insert 3 hg18.chr22 15834580 15834582 1490 - panTro2.chr22 15833380 15833381 1504 - rheMac2.chr10 61474725 61474726 1523 - +377 hg18.chr22_insert 1 hg18.chr22 15836034 15836034 8236 - panTro2.chr22 15834836 15834837 8244 - rheMac2.chr10 61476205 61476206 8252 - +377 hg18.chr22_insert 1 hg18.chr22 15838182 15838182 8236 - panTro2.chr22 15837004 15837005 8244 - rheMac2.chr10 61478382 61478383 8252 - +377 hg18.chr22_insert 1 hg18.chr22 15842483 15842483 8236 - panTro2.chr22 15841305 15841306 8244 - rheMac2.chr10 61482691 61482692 8252 - +377 hg18.chr22_insert 3 hg18.chr22 15842885 15842887 8236 - panTro2.chr22 15841706 15841707 8244 - rheMac2.chr10 61483067 61483068 8252 - +377 hg18.chr22_insert 2 hg18.chr22 15843275 15843276 8236 - panTro2.chr22 15842093 15842094 8244 - rheMac2.chr10 61483470 61483471 8252 - +401 hg18.chr22_insert 1 hg18.chr22 15851529 15851529 404 - panTro2.chr22 15850534 15850535 403 - rheMac2.chr10 61491590 61491591 403 - +411 hg18.chr22_insert 3 hg18.chr22 15852285 15852287 121 - panTro2.chr22 15851289 15851290 125 - rheMac2.chr10 61492341 61492342 120 - +426 hg18.chr22_insert 1 hg18.chr22 15865920 15865920 2420 - panTro2.chr22 15867042 15867043 2404 - rheMac2.chr10 61507277 61507278 2513 - +428 hg18.chr22_insert 4 hg18.chr22 15868291 15868294 384 - panTro2.chr22 15869397 15869398 378 - rheMac2.chr10 61510064 61510065 377 - +476 hg18.chr22_insert 1 hg18.chr22 15918033 15918033 538 + panTro2.chr22 15921761 15921762 537 + rheMac2.chr10 61677792 61677793 539 + +773 hg18.chr22_insert 4 hg18.chr22 15977842 15977845 881 - panTro2.chr22 15984915 15984916 877 - rheMac2.chr10 61754374 61754375 873 - +786 hg18.chr22_insert 4 hg18.chr22 15977842 15977845 881 - panTro2.chr22 15984915 15984916 877 - rheMac2.chr10 61754374 61754375 873 - +900 hg18.chr22_insert 3 hg18.chr22 16005971 16005973 374 - panTro2.chr22 16013594 16013595 371 - rheMac2.chr10 61785476 61785477 388 - +953 hg18.chr22_insert 3 hg18.chr22 16005971 16005973 374 - panTro2.chr22 16013594 16013595 371 - rheMac2.chr10 61785476 61785477 388 - +1014 hg18.chr22_insert 1 hg18.chr22 16015522 16015522 47 - panTro2.chr22 16021801 16021802 46 - rheMac2.chr10 61794692 61794693 35 - +1018 hg18.chr22_insert 1 hg18.chr22 16015929 16015929 105 - panTro2.chr22 16022203 16022204 104 - rheMac2.chr10 61795086 61795087 104 - +1024 hg18.chr22_insert 1 hg18.chr22 16018143 16018143 577 - panTro2.chr22 16024421 16024422 553 - rheMac2.chr10 61797115 61797116 577 - +1024 hg18.chr22_insert 12 hg18.chr22 16018353 16018364 577 - panTro2.chr22 16024630 16024631 553 - rheMac2.chr10 61797332 61797333 577 - +1073 hg18.chr22_insert 3 hg18.chr22 16005971 16005973 374 - panTro2.chr22 16013594 16013595 371 - rheMac2.chr10 61785476 61785477 388 - +1134 hg18.chr22_insert 1 hg18.chr22 16015522 16015522 47 - panTro2.chr22 16021801 16021802 46 - rheMac2.chr10 61794692 61794693 35 - +1138 hg18.chr22_insert 1 hg18.chr22 16015929 16015929 105 - panTro2.chr22 16022203 16022204 104 - rheMac2.chr10 61795086 61795087 104 - +1144 hg18.chr22_insert 1 hg18.chr22 16018143 16018143 577 - panTro2.chr22 16024421 16024422 553 - rheMac2.chr10 61797115 61797116 577 - +1144 hg18.chr22_insert 12 hg18.chr22 16018353 16018364 577 - panTro2.chr22 16024630 16024631 553 - rheMac2.chr10 61797332 61797333 577 - +1193 hg18.chr22_insert 3 hg18.chr22 16005971 16005973 374 - panTro2.chr22 16013594 16013595 371 - rheMac2.chr10 61785476 61785477 388 - +1254 hg18.chr22_insert 1 hg18.chr22 16015522 16015522 47 - panTro2.chr22 16021801 16021802 46 - rheMac2.chr10 61794692 61794693 35 - +1258 hg18.chr22_insert 1 hg18.chr22 16015929 16015929 105 - panTro2.chr22 16022203 16022204 104 - rheMac2.chr10 61795086 61795087 104 - +1264 hg18.chr22_insert 1 hg18.chr22 16018143 16018143 577 - panTro2.chr22 16024421 16024422 553 - rheMac2.chr10 61797115 61797116 577 - +1264 hg18.chr22_insert 12 hg18.chr22 16018353 16018364 577 - panTro2.chr22 16024630 16024631 553 - rheMac2.chr10 61797332 61797333 577 - +1288 hg18.chr22_insert 7 hg18.chr22 16021426 16021432 191 - panTro2.chr22 16028154 16028155 184 - rheMac2.chr10 61801287 61801288 180 - +1291 hg18.chr22_insert 1 hg18.chr22 16021816 16021816 75 - panTro2.chr22 16028537 16028538 74 - rheMac2.chr10 61801981 61801982 74 - +1320 hg18.chr22_insert 7 hg18.chr22 16021539 16021545 191 + panTro2.chr22 16028267 16028268 184 + rheMac2.chr10 61801404 61801405 180 + +1323 hg18.chr22_insert 1 hg18.chr22 16021831 16021831 75 + panTro2.chr22 16028552 16028553 74 + rheMac2.chr10 61801996 61801997 74 + +1361 hg18.chr22_insert 1 hg18.chr22 16043013 16043013 275 - panTro2.chr22 16049618 16049619 274 - rheMac2.chr10 61823592 61823593 239 - +1362 hg18.chr22_insert 27 hg18.chr22 16043355 16043381 513 - panTro2.chr22 16049959 16049960 480 - rheMac2.chr10 61823900 61823901 483 - +1388 hg18.chr22_insert 1 hg18.chr22 16047551 16047551 424 - panTro2.chr22 16055657 16055658 423 - rheMac2.chr10 61827324 61827325 433 - +1405 hg18.chr22_insert 14 hg18.chr22 16052058 16052071 1507 - panTro2.chr22 16060345 16060346 1493 - rheMac2.chr10 61832414 61832415 1494 - +1420 hg18.chr22_insert 1 hg18.chr22 16055170 16055170 794 - panTro2.chr22 16063442 16063443 793 - rheMac2.chr10 61835559 61835560 820 - +1468 hg18.chr22_insert 1 hg18.chr22 16043013 16043013 275 - panTro2.chr22 16049618 16049619 274 - rheMac2.chr10 61823592 61823593 239 - +1469 hg18.chr22_insert 27 hg18.chr22 16043355 16043381 513 - panTro2.chr22 16049959 16049960 480 - rheMac2.chr10 61823900 61823901 483 - +1495 hg18.chr22_insert 1 hg18.chr22 16047551 16047551 424 - panTro2.chr22 16055657 16055658 423 - rheMac2.chr10 61827324 61827325 433 - +1512 hg18.chr22_insert 14 hg18.chr22 16052058 16052071 1507 - panTro2.chr22 16060345 16060346 1493 - rheMac2.chr10 61832414 61832415 1494 - +1527 hg18.chr22_insert 1 hg18.chr22 16055170 16055170 794 - panTro2.chr22 16063442 16063443 793 - rheMac2.chr10 61835559 61835560 820 - +1559 hg18.chr22_insert 1 hg18.chr22 16060760 16060760 120 - panTro2.chr22 16069228 16069229 119 - rheMac2.chr10 61843845 61843846 108 - +1604 hg18.chr22_insert 1 hg18.chr22 16067467 16067467 101 - panTro2.chr22 16076259 16076260 100 - rheMac2.chr10 61853400 61853401 100 - +1605 hg18.chr22_insert 19 hg18.chr22 16067560 16067578 194 - panTro2.chr22 16076351 16076352 192 - rheMac2.chr10 61853492 61853493 190 - +1644 hg18.chr22_insert 1 hg18.chr22 16043013 16043013 275 - panTro2.chr22 16049618 16049619 274 - rheMac2.chr10 61823592 61823593 239 - +1645 hg18.chr22_insert 27 hg18.chr22 16043355 16043381 513 - panTro2.chr22 16049959 16049960 480 - rheMac2.chr10 61823900 61823901 483 - +1671 hg18.chr22_insert 1 hg18.chr22 16047551 16047551 424 - panTro2.chr22 16055657 16055658 423 - rheMac2.chr10 61827324 61827325 433 - +1688 hg18.chr22_insert 14 hg18.chr22 16052058 16052071 1507 - panTro2.chr22 16060345 16060346 1493 - rheMac2.chr10 61832414 61832415 1494 - +1703 hg18.chr22_insert 1 hg18.chr22 16055170 16055170 794 - panTro2.chr22 16063442 16063443 793 - rheMac2.chr10 61835559 61835560 820 - +1735 hg18.chr22_insert 1 hg18.chr22 16060760 16060760 120 - panTro2.chr22 16069228 16069229 119 - rheMac2.chr10 61843845 61843846 108 - +1780 hg18.chr22_insert 1 hg18.chr22 16067467 16067467 101 - panTro2.chr22 16076259 16076260 100 - rheMac2.chr10 61853400 61853401 100 - +1781 hg18.chr22_insert 19 hg18.chr22 16067560 16067578 194 - panTro2.chr22 16076351 16076352 192 - rheMac2.chr10 61853492 61853493 190 - +1811 hg18.chr22_insert 1 hg18.chr22 16072671 16072671 222 - panTro2.chr22 16082289 16082290 221 - rheMac2.chr10 61858647 61858648 215 - +1865 hg18.chr22_insert 4 hg18.chr22 16226611 16226614 450 + panTro2.chr22 16252277 16252278 445 + rheMac2.chr10 62035865 62035866 435 + +1878 hg18.chr22_insert 1 hg18.chr22 16228634 16228634 96 + panTro2.chr22 16254298 16254299 95 + rheMac2.chr10 62038238 62038239 95 + +1906 hg18.chr22_insert 2 hg18.chr22 16233244 16233245 68 + panTro2.chr22 16260226 16260227 66 + rheMac2.chr10 62044328 62044329 65 + +1945 hg18.chr22_insert 4 hg18.chr22 16238941 16238944 65 + panTro2.chr22 16266434 16266435 61 + rheMac2.chr10 62050456 62050457 60 + +1946 hg18.chr22_insert 1 hg18.chr22 16239191 16239191 249 + panTro2.chr22 16266680 16266681 248 + rheMac2.chr10 62050702 62050703 247 + +1953 hg18.chr22_insert 1 hg18.chr22 16239856 16239856 76 + panTro2.chr22 16267344 16267345 75 + rheMac2.chr10 62051376 62051377 75 + +1973 hg18.chr22_insert 1 hg18.chr22 16243103 16243103 769 + panTro2.chr22 16270600 16270601 770 + rheMac2.chr10 62054914 62054915 766 + +1977 hg18.chr22_insert 4 hg18.chr22 16246897 16246900 162 + panTro2.chr22 16274440 16274441 158 + rheMac2.chr10 62058983 62058984 162 + +1995 hg18.chr22_insert 1 hg18.chr22 16250623 16250623 272 + panTro2.chr22 16278157 16278158 270 + rheMac2.chr10 62062783 62062784 273 + +2011 hg18.chr22_insert 2 hg18.chr22 16254744 16254745 767 + panTro2.chr22 16282242 16282243 772 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16335592 16335593 251 + panTro2.chr22 16370214 16370215 249 + rheMac2.chr10 62158376 62158377 248 + +2380 hg18.chr22_insert 5 hg18.chr22 16337393 16337397 57 + panTro2.chr22 16372008 16372009 52 + rheMac2.chr10 62161946 62161947 32 + +2406 hg18.chr22_insert 1 hg18.chr22 16343984 16343984 394 + panTro2.chr22 16381330 16381331 393 + rheMac2.chr10 62168327 62168328 393 + +2453 hg18.chr22_insert 3 hg18.chr22 16353304 16353306 123 + panTro2.chr22 16390677 16390678 120 + rheMac2.chr10 62178374 62178375 120 + +2496 hg18.chr22_insert 4 hg18.chr22 16359446 16359449 185 + panTro2.chr22 16396823 16396824 181 + rheMac2.chr10 62183840 62183841 182 + +2530 hg18.chr22_insert 4 hg18.chr22 16364566 16364569 280 + panTro2.chr22 16401936 16401937 276 + rheMac2.chr10 62188910 62188911 247 + +2546 hg18.chr22_insert 1 hg18.chr22 16372864 16372864 256 + panTro2.chr22 16410224 16410225 255 + rheMac2.chr10 62197530 62197531 253 + +2568 hg18.chr22_insert 1 hg18.chr22 16379877 16379877 857 + panTro2.chr22 16417245 16417246 856 + rheMac2.chr10 62203491 62203492 825 + +2616 hg18.chr22_insert 1 hg18.chr22 16390898 16390898 1020 + panTro2.chr22 16428794 16428795 1019 + rheMac2.chr10 62216152 62216153 1032 + +2620 hg18.chr22_insert 2 hg18.chr22 16395386 16395387 286 + panTro2.chr22 16434150 16434151 283 + rheMac2.chr10 62222097 62222098 286 + +2725 hg18.chr22_insert 6 hg18.chr22 16412481 16412486 45 + panTro2.chr22 16451642 16451643 39 + rheMac2.chr10 62239102 62239103 40 + +2735 hg18.chr22_insert 5 hg18.chr22 16337393 16337397 57 + panTro2.chr22 16372008 16372009 52 + rheMac2.chr10 62161946 62161947 32 + +2761 hg18.chr22_insert 1 hg18.chr22 16343984 16343984 394 + panTro2.chr22 16381330 16381331 393 + rheMac2.chr10 62168327 62168328 393 + +2808 hg18.chr22_insert 3 hg18.chr22 16353304 16353306 123 + panTro2.chr22 16390677 16390678 120 + rheMac2.chr10 62178374 62178375 120 + +2851 hg18.chr22_insert 4 hg18.chr22 16359446 16359449 185 + panTro2.chr22 16396823 16396824 181 + rheMac2.chr10 62183840 62183841 182 + +2885 hg18.chr22_insert 4 hg18.chr22 16364566 16364569 280 + panTro2.chr22 16401936 16401937 276 + rheMac2.chr10 62188910 62188911 247 + +2901 hg18.chr22_insert 1 hg18.chr22 16372864 16372864 256 + panTro2.chr22 16410224 16410225 255 + rheMac2.chr10 62197530 62197531 253 + +2923 hg18.chr22_insert 1 hg18.chr22 16379877 16379877 857 + panTro2.chr22 16417245 16417246 856 + rheMac2.chr10 62203491 62203492 825 + +2971 hg18.chr22_insert 1 hg18.chr22 16390898 16390898 1020 + panTro2.chr22 16428794 16428795 1019 + rheMac2.chr10 62216152 62216153 1032 + +2975 hg18.chr22_insert 2 hg18.chr22 16395386 16395387 286 + panTro2.chr22 16434150 16434151 283 + rheMac2.chr10 62222097 62222098 286 + +3080 hg18.chr22_insert 6 hg18.chr22 16412481 16412486 45 + panTro2.chr22 16451642 16451643 39 + rheMac2.chr10 62239102 62239103 40 + +3090 hg18.chr22_insert 5 hg18.chr22 16337393 16337397 57 + panTro2.chr22 16372008 16372009 52 + rheMac2.chr10 62161946 62161947 32 + +3116 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16395386 16395387 286 + panTro2.chr22 16434150 16434151 283 + rheMac2.chr10 62222097 62222098 286 + +3435 hg18.chr22_insert 6 hg18.chr22 16412481 16412486 45 + panTro2.chr22 16451642 16451643 39 + rheMac2.chr10 62239102 62239103 40 + +3443 hg18.chr22_insert 4 hg18.chr22 16359446 16359449 185 + panTro2.chr22 16396823 16396824 181 + rheMac2.chr10 62183840 62183841 182 + +3477 hg18.chr22_insert 4 hg18.chr22 16364566 16364569 280 + panTro2.chr22 16401936 16401937 276 + rheMac2.chr10 62188910 62188911 247 + +3493 hg18.chr22_insert 1 hg18.chr22 16372864 16372864 256 + panTro2.chr22 16410224 16410225 255 + rheMac2.chr10 62197530 62197531 253 + +3515 hg18.chr22_insert 1 hg18.chr22 16379877 16379877 857 + panTro2.chr22 16417245 16417246 856 + rheMac2.chr10 62203491 62203492 825 + +3573 hg18.chr22_insert 6 hg18.chr22 16412481 16412486 45 + panTro2.chr22 16451642 16451643 39 + rheMac2.chr10 62239102 62239103 40 + +3608 hg18.chr22_insert 5 hg18.chr22 16433769 16433773 677 + panTro2.chr22 16472401 16472402 672 + rheMac2.chr10 62257045 62257046 614 + +3610 hg18.chr22_insert 1 hg18.chr22 16434134 16434134 526 + panTro2.chr22 16472761 16472762 524 + rheMac2.chr10 62257437 62257438 538 + +3691 hg18.chr22_insert 5 hg18.chr22 16433769 16433773 677 + panTro2.chr22 16472401 16472402 672 + rheMac2.chr10 62257045 62257046 614 + +3693 hg18.chr22_insert 1 hg18.chr22 16434134 16434134 526 + panTro2.chr22 16472761 16472762 524 + rheMac2.chr10 62257437 62257438 538 + +3787 hg18.chr22_insert 5 hg18.chr22 16433769 16433773 677 + panTro2.chr22 16472401 16472402 672 + rheMac2.chr10 62257045 62257046 614 + +3789 hg18.chr22_insert 1 hg18.chr22 16434134 16434134 526 + panTro2.chr22 16472761 16472762 524 + rheMac2.chr10 62257437 62257438 538 + +3985 hg18.chr22_insert 24 hg18.chr22 16483248 16483271 142 - panTro2.chr22 16522820 16522821 118 - rheMac2.chr10 62314065 62314066 118 - +3990 hg18.chr22_insert 2 hg18.chr22 16485282 16485283 244 - panTro2.chr22 16524832 16524833 242 - rheMac2.chr10 62317057 62317058 243 - +3998 hg18.chr22_insert 24 hg18.chr22 16488105 16488128 290 - panTro2.chr22 16527669 16527670 266 - rheMac2.chr10 62321696 62321697 270 - +4004 hg18.chr22_insert 1 hg18.chr22 16488955 16488955 285 - panTro2.chr22 16528496 16528497 287 - rheMac2.chr10 62322524 62322525 274 - +4145 hg18.chr22_insert 24 hg18.chr22 16483248 16483271 142 - panTro2.chr22 16522820 16522821 118 - rheMac2.chr10 62314065 62314066 118 - +4150 hg18.chr22_insert 2 hg18.chr22 16485282 16485283 244 - panTro2.chr22 16524832 16524833 242 - rheMac2.chr10 62317057 62317058 243 - +4158 hg18.chr22_insert 24 hg18.chr22 16488105 16488128 290 - panTro2.chr22 16527669 16527670 266 - rheMac2.chr10 62321696 62321697 270 - +4164 hg18.chr22_insert 1 hg18.chr22 16488955 16488955 285 - panTro2.chr22 16528496 16528497 287 - rheMac2.chr10 62322524 62322525 274 - +4305 hg18.chr22_insert 24 hg18.chr22 16483248 16483271 142 - panTro2.chr22 16522820 16522821 118 - rheMac2.chr10 62314065 62314066 118 - +4310 hg18.chr22_insert 2 hg18.chr22 16485282 16485283 244 - panTro2.chr22 16524832 16524833 242 - rheMac2.chr10 62317057 62317058 243 - +4318 hg18.chr22_insert 24 hg18.chr22 16488105 16488128 290 - panTro2.chr22 16527669 16527670 266 - rheMac2.chr10 62321696 62321697 270 - +4324 hg18.chr22_insert 1 hg18.chr22 16488955 16488955 285 - panTro2.chr22 16528496 16528497 287 - rheMac2.chr10 62322524 62322525 274 - +4334 hg18.chr22_insert 2 hg18.chr22 16492040 16492041 270 + panTro2.chr22 16531556 16531557 267 + rheMac2.chr10 62326300 62326301 274 + +4343 hg18.chr22_insert 34 hg18.chr22 16494412 16494445 1674 + panTro2.chr22 16534420 16534421 1643 + rheMac2.chr10 62328251 62328252 1585 + +4421 hg18.chr22_insert 22 hg18.chr22 16509729 16509750 192 + panTro2.chr22 16550830 16550831 170 + rheMac2.chr10 62343886 62343887 165 + +4439 hg18.chr22_insert 1 hg18.chr22 16513207 16513207 94 + panTro2.chr22 16554581 16554582 93 + rheMac2.chr10 62348379 62348380 93 + +4495 hg18.chr22_insert 1 hg18.chr22 16531090 16531090 2276 + panTro2.chr22 16572803 16572804 2271 + rheMac2.chr10 62366276 62366277 2277 + +4520 hg18.chr22_insert 1 hg18.chr22 16536560 16536560 61 + panTro2.chr22 16578271 16578272 60 + rheMac2.chr10 62371723 62371724 60 + +4540 hg18.chr22_insert 1 hg18.chr22 16539071 16539071 305 + panTro2.chr22 16580801 16580802 304 + rheMac2.chr10 62375628 62375629 305 + +4570 hg18.chr22_insert 1 hg18.chr22 16549703 16549703 283 + panTro2.chr22 16591410 16591411 287 + rheMac2.chr10 62385562 62385563 284 + +4632 hg18.chr22_insert 2 hg18.chr22 16557303 16557304 56 + panTro2.chr22 16599231 16599232 52 + rheMac2.chr10 62394189 62394190 55 + +4632 hg18.chr22_insert 2 hg18.chr22 16557308 16557309 56 + panTro2.chr22 16599234 16599235 52 + rheMac2.chr10 62394192 62394193 55 + +4684 hg18.chr22_insert 2 hg18.chr22 16564204 16564205 102 + panTro2.chr22 16606654 16606655 100 + rheMac2.chr10 62400892 62400893 95 + +4746 hg18.chr22_insert 22 hg18.chr22 16509729 16509750 192 + panTro2.chr22 16550830 16550831 170 + rheMac2.chr10 62343886 62343887 165 + +4764 hg18.chr22_insert 1 hg18.chr22 16513207 16513207 94 + panTro2.chr22 16554581 16554582 93 + rheMac2.chr10 62348379 62348380 93 + +4820 hg18.chr22_insert 1 hg18.chr22 16531090 16531090 2276 + panTro2.chr22 16572803 16572804 2271 + rheMac2.chr10 62366276 62366277 2277 + +4845 hg18.chr22_insert 1 hg18.chr22 16536560 16536560 61 + panTro2.chr22 16578271 16578272 60 + rheMac2.chr10 62371723 62371724 60 + +4865 hg18.chr22_insert 1 hg18.chr22 16539071 16539071 305 + panTro2.chr22 16580801 16580802 304 + rheMac2.chr10 62375628 62375629 305 + +4895 hg18.chr22_insert 1 hg18.chr22 16549703 16549703 283 + panTro2.chr22 16591410 16591411 287 + rheMac2.chr10 62385562 62385563 284 + +4957 hg18.chr22_insert 2 hg18.chr22 16557303 16557304 56 + panTro2.chr22 16599231 16599232 52 + rheMac2.chr10 62394189 62394190 55 + +4957 hg18.chr22_insert 2 hg18.chr22 16557308 16557309 56 + panTro2.chr22 16599234 16599235 52 + rheMac2.chr10 62394192 62394193 55 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16557303 16557304 56 + panTro2.chr22 16599231 16599232 52 + rheMac2.chr10 62394189 62394190 55 + +5282 hg18.chr22_insert 2 hg18.chr22 16557308 16557309 56 + panTro2.chr22 16599234 16599235 52 + rheMac2.chr10 62394192 62394193 55 + +5334 hg18.chr22_insert 2 hg18.chr22 16564204 16564205 102 + panTro2.chr22 16606654 16606655 100 + rheMac2.chr10 62400892 62400893 95 + +5356 hg18.chr22_insert 2 hg18.chr22 16568693 16568694 309 + panTro2.chr22 16612218 16612219 307 + rheMac2.chr10 62406519 62406520 307 + +5362 hg18.chr22_insert 1 hg18.chr22 16569950 16569950 225 + panTro2.chr22 16613474 16613475 201 + rheMac2.chr10 62407773 62407774 225 + +5433 hg18.chr22_insert 1 hg18.chr22 16580120 16580120 210 + panTro2.chr22 16624680 16624681 238 + rheMac2.chr10 62417768 62417769 219 + +5551 hg18.chr22_insert 22 hg18.chr22 16509729 16509750 192 + panTro2.chr22 16550830 16550831 170 + rheMac2.chr10 62343886 62343887 165 + +5569 hg18.chr22_insert 1 hg18.chr22 16513207 16513207 94 + panTro2.chr22 16554581 16554582 93 + rheMac2.chr10 62348379 62348380 93 + +5625 hg18.chr22_insert 1 hg18.chr22 16531090 16531090 2276 + panTro2.chr22 16572803 16572804 2271 + rheMac2.chr10 62366276 62366277 2277 + +5650 hg18.chr22_insert 1 hg18.chr22 16536560 16536560 61 + panTro2.chr22 16578271 16578272 60 + rheMac2.chr10 62371723 62371724 60 + +5670 hg18.chr22_insert 1 hg18.chr22 16539071 16539071 305 + panTro2.chr22 16580801 16580802 304 + rheMac2.chr10 62375628 62375629 305 + +5700 hg18.chr22_insert 1 hg18.chr22 16549703 16549703 283 + panTro2.chr22 16591410 16591411 287 + rheMac2.chr10 62385562 62385563 284 + +5762 hg18.chr22_insert 2 hg18.chr22 16557303 16557304 56 + panTro2.chr22 16599231 16599232 52 + rheMac2.chr10 62394189 62394190 55 + +5762 hg18.chr22_insert 2 hg18.chr22 16557308 16557309 56 + panTro2.chr22 16599234 16599235 52 + rheMac2.chr10 62394192 62394193 55 + +5814 hg18.chr22_insert 2 hg18.chr22 16564204 16564205 102 + panTro2.chr22 16606654 16606655 100 + rheMac2.chr10 62400892 62400893 95 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16539071 16539071 305 + panTro2.chr22 16580801 16580802 304 + rheMac2.chr10 62375628 62375629 305 + +6180 hg18.chr22_insert 1 hg18.chr22 16549703 16549703 283 + panTro2.chr22 16591410 16591411 287 + rheMac2.chr10 62385562 62385563 284 + +6242 hg18.chr22_insert 2 hg18.chr22 16557303 16557304 56 + panTro2.chr22 16599231 16599232 52 + rheMac2.chr10 62394189 62394190 55 + +6242 hg18.chr22_insert 2 hg18.chr22 16557308 16557309 56 + panTro2.chr22 16599234 16599235 52 + rheMac2.chr10 62394192 62394193 55 + +6294 hg18.chr22_insert 2 hg18.chr22 16564204 16564205 102 + panTro2.chr22 16606654 16606655 100 + rheMac2.chr10 62400892 62400893 95 + +6316 hg18.chr22_insert 2 hg18.chr22 16568693 16568694 309 + panTro2.chr22 16612218 16612219 307 + rheMac2.chr10 62406519 62406520 307 + +6322 hg18.chr22_insert 1 hg18.chr22 16569950 16569950 225 + panTro2.chr22 16613474 16613475 201 + rheMac2.chr10 62407773 62407774 225 + +6393 hg18.chr22_insert 1 hg18.chr22 16580120 16580120 210 + panTro2.chr22 16624680 16624681 238 + rheMac2.chr10 62417768 62417769 219 + +6511 hg18.chr22_insert 22 hg18.chr22 16509729 16509750 192 + panTro2.chr22 16550830 16550831 170 + rheMac2.chr10 62343886 62343887 165 + +6529 hg18.chr22_insert 1 hg18.chr22 16513207 16513207 94 + panTro2.chr22 16554581 16554582 93 + rheMac2.chr10 62348379 62348380 93 + +6585 hg18.chr22_insert 1 hg18.chr22 16531090 16531090 2276 + panTro2.chr22 16572803 16572804 2271 + rheMac2.chr10 62366276 62366277 2277 + +6610 hg18.chr22_insert 1 hg18.chr22 16536560 16536560 61 + panTro2.chr22 16578271 16578272 60 + rheMac2.chr10 62371723 62371724 60 + +6630 hg18.chr22_insert 1 hg18.chr22 16539071 16539071 305 + panTro2.chr22 16580801 16580802 304 + rheMac2.chr10 62375628 62375629 305 + +6660 hg18.chr22_insert 1 hg18.chr22 16549703 16549703 283 + panTro2.chr22 16591410 16591411 287 + rheMac2.chr10 62385562 62385563 284 + +6722 hg18.chr22_insert 2 hg18.chr22 16557303 16557304 56 + panTro2.chr22 16599231 16599232 52 + rheMac2.chr10 62394189 62394190 55 + +6722 hg18.chr22_insert 2 hg18.chr22 16557308 16557309 56 + panTro2.chr22 16599234 16599235 52 + rheMac2.chr10 62394192 62394193 55 + +6774 hg18.chr22_insert 2 hg18.chr22 16564204 16564205 102 + panTro2.chr22 16606654 16606655 100 + rheMac2.chr10 62400892 62400893 95 + +6796 hg18.chr22_insert 2 hg18.chr22 16568693 16568694 309 + panTro2.chr22 16612218 16612219 307 + rheMac2.chr10 62406519 62406520 307 + +6802 hg18.chr22_insert 1 hg18.chr22 16569950 16569950 225 + panTro2.chr22 16613474 16613475 201 + rheMac2.chr10 62407773 62407774 225 + +6873 hg18.chr22_insert 1 hg18.chr22 16580120 16580120 210 + panTro2.chr22 16624680 16624681 238 + rheMac2.chr10 62417768 62417769 219 + +6976 hg18.chr22_insert 1 hg18.chr22 16531090 16531090 2276 + panTro2.chr22 16572803 16572804 2271 + rheMac2.chr10 62366276 62366277 2277 + +7001 hg18.chr22_insert 1 hg18.chr22 16536560 16536560 61 + panTro2.chr22 16578271 16578272 60 + rheMac2.chr10 62371723 62371724 60 + +7021 hg18.chr22_insert 1 hg18.chr22 16539071 16539071 305 + panTro2.chr22 16580801 16580802 304 + rheMac2.chr10 62375628 62375629 305 + +7051 hg18.chr22_insert 1 hg18.chr22 16549703 16549703 283 + panTro2.chr22 16591410 16591411 287 + rheMac2.chr10 62385562 62385563 284 + +7113 hg18.chr22_insert 2 hg18.chr22 16557303 16557304 56 + panTro2.chr22 16599231 16599232 52 + rheMac2.chr10 62394189 62394190 55 + +7113 hg18.chr22_insert 2 hg18.chr22 16557308 16557309 56 + panTro2.chr22 16599234 16599235 52 + rheMac2.chr10 62394192 62394193 55 + +7165 hg18.chr22_insert 2 hg18.chr22 16564204 16564205 102 + panTro2.chr22 16606654 16606655 100 + rheMac2.chr10 62400892 62400893 95 + +7187 hg18.chr22_insert 2 hg18.chr22 16568693 16568694 309 + panTro2.chr22 16612218 16612219 307 + rheMac2.chr10 62406519 62406520 307 + +7193 hg18.chr22_insert 1 hg18.chr22 16569950 16569950 225 + panTro2.chr22 16613474 16613475 201 + rheMac2.chr10 62407773 62407774 225 + +7264 hg18.chr22_insert 1 hg18.chr22 16580120 16580120 210 + panTro2.chr22 16624680 16624681 238 + rheMac2.chr10 62417768 62417769 219 + +7377 hg18.chr22_insert 2 hg18.chr22 16557303 16557304 56 + panTro2.chr22 16599231 16599232 52 + rheMac2.chr10 62394189 62394190 55 + +7377 hg18.chr22_insert 2 hg18.chr22 16557308 16557309 56 + panTro2.chr22 16599234 16599235 52 + rheMac2.chr10 62394192 62394193 55 + +7429 hg18.chr22_insert 2 hg18.chr22 16564204 16564205 102 + panTro2.chr22 16606654 16606655 100 + rheMac2.chr10 62400892 62400893 95 + +7451 hg18.chr22_insert 2 hg18.chr22 16568693 16568694 309 + panTro2.chr22 16612218 16612219 307 + rheMac2.chr10 62406519 62406520 307 + +7457 hg18.chr22_insert 1 hg18.chr22 16569950 16569950 225 + panTro2.chr22 16613474 16613475 201 + rheMac2.chr10 62407773 62407774 225 + +7528 hg18.chr22_insert 1 hg18.chr22 16580120 16580120 210 + panTro2.chr22 16624680 16624681 238 + rheMac2.chr10 62417768 62417769 219 + +7596 hg18.chr22_insert 1 hg18.chr22 16569950 16569950 225 + panTro2.chr22 16613474 16613475 201 + rheMac2.chr10 62407773 62407774 225 + +7667 hg18.chr22_insert 1 hg18.chr22 16580120 16580120 210 + panTro2.chr22 16624680 16624681 238 + rheMac2.chr10 62417768 62417769 219 + +7754 hg18.chr22_insert 1 hg18.chr22 16597801 16597801 192 + panTro2.chr22 16649689 16649690 191 + rheMac2.chr10 62433733 62433734 192 + +7765 hg18.chr22_insert 1 hg18.chr22 16597865 16597865 192 - panTro2.chr22 16649753 16649754 191 - rheMac2.chr10 62433796 62433797 192 - +7804 hg18.chr22_insert 1 hg18.chr22 16604355 16604355 305 - panTro2.chr22 16656238 16656239 307 - rheMac2.chr10 62441180 62441181 304 - +7849 hg18.chr22_insert 3 hg18.chr22 16611256 16611258 541 - panTro2.chr22 16663491 16663492 539 - rheMac2.chr10 62448536 62448537 558 - +7884 hg18.chr22_insert 1 hg18.chr22 16620637 16620637 832 - panTro2.chr22 16672497 16672498 831 - rheMac2.chr10 62457950 62457951 820 - +7887 hg18.chr22_insert 1 hg18.chr22 16622311 16622311 632 - panTro2.chr22 16674170 16674171 629 - rheMac2.chr10 62459604 62459605 605 - +7902 hg18.chr22_insert 2 hg18.chr22 16624394 16624395 210 - panTro2.chr22 16676247 16676248 208 - rheMac2.chr10 62461666 62461667 178 - +7955 hg18.chr22_insert 1 hg18.chr22 16597865 16597865 192 - panTro2.chr22 16649753 16649754 191 - rheMac2.chr10 62433796 62433797 192 - +7994 hg18.chr22_insert 1 hg18.chr22 16604355 16604355 305 - panTro2.chr22 16656238 16656239 307 - rheMac2.chr10 62441180 62441181 304 - +8039 hg18.chr22_insert 3 hg18.chr22 16611256 16611258 541 - panTro2.chr22 16663491 16663492 539 - rheMac2.chr10 62448536 62448537 558 - +8074 hg18.chr22_insert 1 hg18.chr22 16620637 16620637 832 - panTro2.chr22 16672497 16672498 831 - rheMac2.chr10 62457950 62457951 820 - +8077 hg18.chr22_insert 1 hg18.chr22 16622311 16622311 632 - panTro2.chr22 16674170 16674171 629 - rheMac2.chr10 62459604 62459605 605 - +8092 hg18.chr22_insert 2 hg18.chr22 16624394 16624395 210 - panTro2.chr22 16676247 16676248 208 - rheMac2.chr10 62461666 62461667 178 - +8148 hg18.chr22_insert 1 hg18.chr22 16597865 16597865 192 - panTro2.chr22 16649753 16649754 191 - rheMac2.chr10 62433796 62433797 192 - +8187 hg18.chr22_insert 1 hg18.chr22 16604355 16604355 305 - panTro2.chr22 16656238 16656239 307 - rheMac2.chr10 62441180 62441181 304 - +8232 hg18.chr22_insert 3 hg18.chr22 16611256 16611258 541 - panTro2.chr22 16663491 16663492 539 - rheMac2.chr10 62448536 62448537 558 - +8267 hg18.chr22_insert 1 hg18.chr22 16620637 16620637 832 - panTro2.chr22 16672497 16672498 831 - rheMac2.chr10 62457950 62457951 820 - +8270 hg18.chr22_insert 1 hg18.chr22 16622311 16622311 632 - panTro2.chr22 16674170 16674171 629 - rheMac2.chr10 62459604 62459605 605 - +8285 hg18.chr22_insert 2 hg18.chr22 16624394 16624395 210 - panTro2.chr22 16676247 16676248 208 - rheMac2.chr10 62461666 62461667 178 - +8341 hg18.chr22_insert 1 hg18.chr22 16597865 16597865 192 - panTro2.chr22 16649753 16649754 191 - rheMac2.chr10 62433796 62433797 192 - +8380 hg18.chr22_insert 1 hg18.chr22 16604355 16604355 305 - panTro2.chr22 16656238 16656239 307 - rheMac2.chr10 62441180 62441181 304 - +8425 hg18.chr22_insert 3 hg18.chr22 16611256 16611258 541 - panTro2.chr22 16663491 16663492 539 - rheMac2.chr10 62448536 62448537 558 - +8460 hg18.chr22_insert 1 hg18.chr22 16620637 16620637 832 - panTro2.chr22 16672497 16672498 831 - rheMac2.chr10 62457950 62457951 820 - +8463 hg18.chr22_insert 1 hg18.chr22 16622311 16622311 632 - panTro2.chr22 16674170 16674171 629 - rheMac2.chr10 62459604 62459605 605 - +8478 hg18.chr22_insert 2 hg18.chr22 16624394 16624395 210 - panTro2.chr22 16676247 16676248 208 - rheMac2.chr10 62461666 62461667 178 - +8534 hg18.chr22_insert 1 hg18.chr22 16597865 16597865 192 - panTro2.chr22 16649753 16649754 191 - rheMac2.chr10 62433796 62433797 192 - +8573 hg18.chr22_insert 1 hg18.chr22 16604355 16604355 305 - panTro2.chr22 16656238 16656239 307 - rheMac2.chr10 62441180 62441181 304 - +8618 hg18.chr22_insert 3 hg18.chr22 16611256 16611258 541 - panTro2.chr22 16663491 16663492 539 - rheMac2.chr10 62448536 62448537 558 - 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16622311 16622311 632 - panTro2.chr22 16674170 16674171 629 - rheMac2.chr10 62459604 62459605 605 - +8864 hg18.chr22_insert 2 hg18.chr22 16624394 16624395 210 - panTro2.chr22 16676247 16676248 208 - rheMac2.chr10 62461666 62461667 178 - +8921 hg18.chr22_insert 1 hg18.chr22 16597865 16597865 192 - panTro2.chr22 16649753 16649754 191 - rheMac2.chr10 62433796 62433797 192 - +8960 hg18.chr22_insert 1 hg18.chr22 16604355 16604355 305 - panTro2.chr22 16656238 16656239 307 - rheMac2.chr10 62441180 62441181 304 - +9005 hg18.chr22_insert 3 hg18.chr22 16611256 16611258 541 - panTro2.chr22 16663491 16663492 539 - rheMac2.chr10 62448536 62448537 558 - +9040 hg18.chr22_insert 1 hg18.chr22 16620637 16620637 832 - panTro2.chr22 16672497 16672498 831 - rheMac2.chr10 62457950 62457951 820 - +9043 hg18.chr22_insert 1 hg18.chr22 16622311 16622311 632 - panTro2.chr22 16674170 16674171 629 - rheMac2.chr10 62459604 62459605 605 - +9058 hg18.chr22_insert 2 hg18.chr22 16624394 16624395 210 - panTro2.chr22 16676247 16676248 208 - rheMac2.chr10 62461666 62461667 178 - +9119 hg18.chr22_insert 1 hg18.chr22 16654251 16654251 263 - panTro2.chr22 16707134 16707135 262 - rheMac2.chr10 62489006 62489007 259 - +9120 hg18.chr22_insert 1 hg18.chr22 16654518 16654518 122 - panTro2.chr22 16707400 16707401 121 - rheMac2.chr10 62489270 62489271 119 - +9178 hg18.chr22_insert 2 hg18.chr22 16667852 16667853 613 - panTro2.chr22 16720095 16720096 610 - rheMac2.chr10 62502509 62502510 611 - +9236 hg18.chr22_insert 1 hg18.chr22 16654251 16654251 263 - panTro2.chr22 16707134 16707135 262 - rheMac2.chr10 62489006 62489007 259 - +9237 hg18.chr22_insert 1 hg18.chr22 16654518 16654518 122 - panTro2.chr22 16707400 16707401 121 - rheMac2.chr10 62489270 62489271 119 - +9295 hg18.chr22_insert 2 hg18.chr22 16667852 16667853 613 - panTro2.chr22 16720095 16720096 610 - rheMac2.chr10 62502509 62502510 611 - +9395 hg18.chr22_insert 1 hg18.chr22 16689376 16689376 480 - panTro2.chr22 16743930 16743931 481 - rheMac2.chr10 62524203 62524204 464 - +9443 hg18.chr22_insert 1 hg18.chr22 16701423 16701423 375 - panTro2.chr22 16756196 16756197 377 - rheMac2.chr10 62535726 62535727 371 - +9473 hg18.chr22_insert 3 hg18.chr22 16707877 16707879 283 - panTro2.chr22 16762351 16762352 280 - rheMac2.chr10 62542121 62542122 271 - +9523 hg18.chr22_insert 1 hg18.chr22 16717274 16717274 671 - panTro2.chr22 16771251 16771252 670 - rheMac2.chr10 62551638 62551639 701 - +9650 hg18.chr22_insert 1 hg18.chr22 16748843 16748843 519 - panTro2.chr22 16803662 16803663 518 - rheMac2.chr10 62582329 62582330 525 - +9660 hg18.chr22_insert 1 hg18.chr22 16751184 16751184 201 - panTro2.chr22 16805970 16805971 182 - rheMac2.chr10 62584364 62584365 200 - +9673 hg18.chr22_insert 1 hg18.chr22 16754058 16754058 90 - panTro2.chr22 16808839 16808840 85 - rheMac2.chr10 62587418 62587419 85 - +9834 hg18.chr22_insert 2 hg18.chr22 16785163 16785164 138 - panTro2.chr22 16840642 16840643 136 - rheMac2.chr10 62618715 62618716 131 - +9841 hg18.chr22_insert 1 hg18.chr22 16785860 16785860 207 - panTro2.chr22 16841337 16841338 206 - rheMac2.chr10 62619362 62619363 206 - +9883 hg18.chr22_insert 1 hg18.chr22 16793011 16793011 689 - panTro2.chr22 16850593 16850594 687 - rheMac2.chr10 62627911 62627912 687 - +9915 hg18.chr22_insert 1 hg18.chr22 16804948 16804948 997 - panTro2.chr22 16862511 16862512 996 - rheMac2.chr10 62640039 62640040 994 - +9952 hg18.chr22_insert 1 hg18.chr22 16811670 16811670 206 - panTro2.chr22 16870400 16870401 207 - rheMac2.chr10 62646764 62646765 198 - +10009 hg18.chr22_insert 1 hg18.chr22 16821624 16821624 228 - panTro2.chr22 16880714 16880715 227 - rheMac2.chr10 62656715 62656716 261 - +10047 hg18.chr22_insert 15 hg18.chr22 16828362 16828376 403 - panTro2.chr22 16887448 16887449 388 - rheMac2.chr10 62663958 62663959 390 - +10052 hg18.chr22_insert 2 hg18.chr22 16829950 16829951 296 - panTro2.chr22 16889022 16889023 294 - rheMac2.chr10 62666010 62666011 294 - +10053 hg18.chr22_insert 1 hg18.chr22 16830118 16830118 185 - panTro2.chr22 16889188 16889189 184 - rheMac2.chr10 62666176 62666177 184 - +10054 hg18.chr22_insert 22 hg18.chr22 16830253 16830274 86 - panTro2.chr22 16889322 16889323 64 - rheMac2.chr10 62666310 62666311 61 - +10118 hg18.chr22_insert 1 hg18.chr22 16848057 16848057 229 - panTro2.chr22 16907170 16907171 228 - rheMac2.chr10 62678254 62678255 231 - +10150 hg18.chr22_insert 1 hg18.chr22 16852921 16852921 53 - panTro2.chr22 16912296 16912297 52 - rheMac2.chr10 62683866 62683867 52 - +10161 hg18.chr22_insert 2 hg18.chr22 16855336 16855337 473 - panTro2.chr22 16914710 16914711 471 - rheMac2.chr10 62686293 62686294 481 - +10189 hg18.chr22_insert 1 hg18.chr22 16860119 16860119 320 - panTro2.chr22 16919512 16919513 308 - rheMac2.chr10 62691333 62691334 315 - +10195 hg18.chr22_insert 1 hg18.chr22 16861106 16861106 223 - panTro2.chr22 16920501 16920502 222 - rheMac2.chr10 62692324 62692325 222 - +10223 hg18.chr22_insert 3 hg18.chr22 16866498 16866500 80 - panTro2.chr22 16926111 16926112 77 - rheMac2.chr10 62697707 62697708 71 - +10271 hg18.chr22_insert 5 hg18.chr22 16873608 16873612 199 - panTro2.chr22 16933248 16933249 194 - rheMac2.chr10 62704115 62704116 197 - +10285 hg18.chr22_insert 1 hg18.chr22 16876124 16876124 45 - panTro2.chr22 16935758 16935759 44 - rheMac2.chr10 62706900 62706901 45 - +10321 hg18.chr22_insert 2 hg18.chr22 16881541 16881542 48 - panTro2.chr22 16941220 16941221 42 - rheMac2.chr10 62712038 62712039 42 - +10341 hg18.chr22_insert 3 hg18.chr22 16885166 16885168 49 - panTro2.chr22 16944834 16944835 48 - rheMac2.chr10 62715603 62715604 52 - +10381 hg18.chr22_insert 3 hg18.chr22 16707877 16707879 283 - panTro2.chr22 16762351 16762352 280 - rheMac2.chr10 62542121 62542122 271 - +10431 hg18.chr22_insert 1 hg18.chr22 16717274 16717274 671 - panTro2.chr22 16771251 16771252 670 - rheMac2.chr10 62551638 62551639 701 - +10558 hg18.chr22_insert 1 hg18.chr22 16748843 16748843 519 - panTro2.chr22 16803662 16803663 518 - rheMac2.chr10 62582329 62582330 525 - +10568 hg18.chr22_insert 1 hg18.chr22 16751184 16751184 201 - panTro2.chr22 16805970 16805971 182 - rheMac2.chr10 62584364 62584365 200 - +10581 hg18.chr22_insert 1 hg18.chr22 16754058 16754058 90 - panTro2.chr22 16808839 16808840 85 - rheMac2.chr10 62587418 62587419 85 - +10671 hg18.chr22_insert 3 hg18.chr22 16707877 16707879 283 - panTro2.chr22 16762351 16762352 280 - rheMac2.chr10 62542121 62542122 271 - +10721 hg18.chr22_insert 1 hg18.chr22 16717274 16717274 671 - panTro2.chr22 16771251 16771252 670 - rheMac2.chr10 62551638 62551639 701 - +10848 hg18.chr22_insert 1 hg18.chr22 16748843 16748843 519 - panTro2.chr22 16803662 16803663 518 - rheMac2.chr10 62582329 62582330 525 - +10858 hg18.chr22_insert 1 hg18.chr22 16751184 16751184 201 - panTro2.chr22 16805970 16805971 182 - rheMac2.chr10 62584364 62584365 200 - +10871 hg18.chr22_insert 1 hg18.chr22 16754058 16754058 90 - panTro2.chr22 16808839 16808840 85 - rheMac2.chr10 62587418 62587419 85 - +10976 hg18.chr22_insert 3 hg18.chr22 16707877 16707879 283 - panTro2.chr22 16762351 16762352 280 - rheMac2.chr10 62542121 62542122 271 - +11026 hg18.chr22_insert 1 hg18.chr22 16717274 16717274 671 - panTro2.chr22 16771251 16771252 670 - rheMac2.chr10 62551638 62551639 701 - +11153 hg18.chr22_insert 1 hg18.chr22 16748843 16748843 519 - panTro2.chr22 16803662 16803663 518 - rheMac2.chr10 62582329 62582330 525 - +11163 hg18.chr22_insert 1 hg18.chr22 16751184 16751184 201 - panTro2.chr22 16805970 16805971 182 - rheMac2.chr10 62584364 62584365 200 - +11176 hg18.chr22_insert 1 hg18.chr22 16754058 16754058 90 - panTro2.chr22 16808839 16808840 85 - rheMac2.chr10 62587418 62587419 85 - +11337 hg18.chr22_insert 2 hg18.chr22 16785163 16785164 138 - panTro2.chr22 16840642 16840643 136 - rheMac2.chr10 62618715 62618716 131 - +11344 hg18.chr22_insert 1 hg18.chr22 16785860 16785860 207 - panTro2.chr22 16841337 16841338 206 - rheMac2.chr10 62619362 62619363 206 - +11386 hg18.chr22_insert 1 hg18.chr22 16793011 16793011 689 - panTro2.chr22 16850593 16850594 687 - rheMac2.chr10 62627911 62627912 687 - +11418 hg18.chr22_insert 1 hg18.chr22 16804948 16804948 997 - panTro2.chr22 16862511 16862512 996 - rheMac2.chr10 62640039 62640040 994 - +11455 hg18.chr22_insert 1 hg18.chr22 16811670 16811670 206 - panTro2.chr22 16870400 16870401 207 - rheMac2.chr10 62646764 62646765 198 - +11512 hg18.chr22_insert 1 hg18.chr22 16821624 16821624 228 - panTro2.chr22 16880714 16880715 227 - rheMac2.chr10 62656715 62656716 261 - +11550 hg18.chr22_insert 15 hg18.chr22 16828362 16828376 403 - panTro2.chr22 16887448 16887449 388 - rheMac2.chr10 62663958 62663959 390 - +11555 hg18.chr22_insert 2 hg18.chr22 16829950 16829951 296 - panTro2.chr22 16889022 16889023 294 - rheMac2.chr10 62666010 62666011 294 - +11556 hg18.chr22_insert 1 hg18.chr22 16830118 16830118 185 - panTro2.chr22 16889188 16889189 184 - rheMac2.chr10 62666176 62666177 184 - +11557 hg18.chr22_insert 22 hg18.chr22 16830253 16830274 86 - panTro2.chr22 16889322 16889323 64 - rheMac2.chr10 62666310 62666311 61 - +11621 hg18.chr22_insert 1 hg18.chr22 16848057 16848057 229 - panTro2.chr22 16907170 16907171 228 - rheMac2.chr10 62678254 62678255 231 - +11653 hg18.chr22_insert 1 hg18.chr22 16852921 16852921 53 - panTro2.chr22 16912296 16912297 52 - rheMac2.chr10 62683866 62683867 52 - +11664 hg18.chr22_insert 2 hg18.chr22 16855336 16855337 473 - panTro2.chr22 16914710 16914711 471 - rheMac2.chr10 62686293 62686294 481 - +11692 hg18.chr22_insert 1 hg18.chr22 16860119 16860119 320 - panTro2.chr22 16919512 16919513 308 - rheMac2.chr10 62691333 62691334 315 - +11698 hg18.chr22_insert 1 hg18.chr22 16861106 16861106 223 - panTro2.chr22 16920501 16920502 222 - rheMac2.chr10 62692324 62692325 222 - +11812 hg18.chr22_insert 1 hg18.chr22 16748843 16748843 519 - panTro2.chr22 16803662 16803663 518 - rheMac2.chr10 62582329 62582330 525 - +11822 hg18.chr22_insert 1 hg18.chr22 16751184 16751184 201 - panTro2.chr22 16805970 16805971 182 - rheMac2.chr10 62584364 62584365 200 - +11835 hg18.chr22_insert 1 hg18.chr22 16754058 16754058 90 - panTro2.chr22 16808839 16808840 85 - rheMac2.chr10 62587418 62587419 85 - +11958 hg18.chr22_insert 1 hg18.chr22 16748843 16748843 519 - panTro2.chr22 16803662 16803663 518 - rheMac2.chr10 62582329 62582330 525 - +11968 hg18.chr22_insert 1 hg18.chr22 16751184 16751184 201 - panTro2.chr22 16805970 16805971 182 - rheMac2.chr10 62584364 62584365 200 - +11981 hg18.chr22_insert 1 hg18.chr22 16754058 16754058 90 - panTro2.chr22 16808839 16808840 85 - rheMac2.chr10 62587418 62587419 85 - +12098 hg18.chr22_insert 3 hg18.chr22 16897463 16897465 439 + panTro2.chr22 16958821 16958822 435 + rheMac2.chr10 62728978 62728979 422 + +12109 hg18.chr22_insert 1 hg18.chr22 16899618 16899618 191 + panTro2.chr22 16960970 16960971 190 + rheMac2.chr10 62731480 62731481 196 + +12336 hg18.chr22_insert 1 hg18.chr22 16955450 16955450 169 + panTro2.chr22 17023930 17023931 168 + rheMac2.chr10 62786603 62786604 181 + +12382 hg18.chr22_insert 4 hg18.chr22 16969934 16969937 442 + panTro2.chr22 17038951 17038952 438 + rheMac2.chr10 62801826 62801827 435 + +12400 hg18.chr22_insert 3 hg18.chr22 16974201 16974203 241 + panTro2.chr22 17043737 17043738 238 + rheMac2.chr10 62805769 62805770 255 + +12421 hg18.chr22_insert 2 hg18.chr22 16977420 16977421 236 + panTro2.chr22 17047164 17047165 234 + rheMac2.chr10 62809296 62809297 234 + +12427 hg18.chr22_insert 1 hg18.chr22 16978500 16978500 34 + panTro2.chr22 17048236 17048237 33 + rheMac2.chr10 62810361 62810362 33 + +12432 hg18.chr22_insert 74 hg18.chr22 16979324 16979397 282 + panTro2.chr22 17049059 17049060 208 + rheMac2.chr10 62811184 62811185 208 + +12509 hg18.chr22_insert 1 hg18.chr22 16990914 16990914 166 + panTro2.chr22 17060618 17060619 165 + rheMac2.chr10 62823880 62823881 165 + +12604 hg18.chr22_insert 3 hg18.chr22 16974201 16974203 241 + panTro2.chr22 17043737 17043738 238 + rheMac2.chr10 62805769 62805770 255 + +12625 hg18.chr22_insert 2 hg18.chr22 16977420 16977421 236 + panTro2.chr22 17047164 17047165 234 + rheMac2.chr10 62809296 62809297 234 + +12631 hg18.chr22_insert 1 hg18.chr22 16978500 16978500 34 + panTro2.chr22 17048236 17048237 33 + rheMac2.chr10 62810361 62810362 33 + +12636 hg18.chr22_insert 74 hg18.chr22 16979324 16979397 282 + panTro2.chr22 17049059 17049060 208 + rheMac2.chr10 62811184 62811185 208 + +12707 hg18.chr22_insert 3 hg18.chr22 16974201 16974203 241 + panTro2.chr22 17043737 17043738 238 + rheMac2.chr10 62805769 62805770 255 + +12728 hg18.chr22_insert 2 hg18.chr22 16977420 16977421 236 + panTro2.chr22 17047164 17047165 234 + rheMac2.chr10 62809296 62809297 234 + +12734 hg18.chr22_insert 1 hg18.chr22 16978500 16978500 34 + panTro2.chr22 17048236 17048237 33 + rheMac2.chr10 62810361 62810362 33 + +12739 hg18.chr22_insert 74 hg18.chr22 16979324 16979397 282 + panTro2.chr22 17049059 17049060 208 + rheMac2.chr10 62811184 62811185 208 + +12816 hg18.chr22_insert 1 hg18.chr22 16990914 16990914 166 + panTro2.chr22 17060618 17060619 165 + rheMac2.chr10 62823880 62823881 165 + +12885 hg18.chr22_insert 1 hg18.chr22 16990914 16990914 166 + panTro2.chr22 17060618 17060619 165 + rheMac2.chr10 62823880 62823881 165 + +12920 hg18.chr22_insert 1 hg18.chr22 16990914 16990914 166 + panTro2.chr22 17060618 17060619 165 + rheMac2.chr10 62823880 62823881 165 + +12966 hg18.chr22_insert 4 hg18.chr22 16997077 16997080 85 + panTro2.chr22 17066755 17066756 81 + rheMac2.chr10 62831295 62831296 80 + +13100 hg18.chr22_insert 1 hg18.chr22 17034225 17034225 137 + panTro2.chr22 17103781 17103782 136 + rheMac2.chr10 62867181 62867182 136 + +13116 hg18.chr22_insert 3 hg18.chr22 17037071 17037073 328 + panTro2.chr22 17106628 17106629 315 + rheMac2.chr10 62870040 62870041 306 + +13140 hg18.chr22_insert 4 hg18.chr22 17042175 17042178 693 - panTro2.chr22 17112461 17112462 689 - rheMac2.chr10 62876115 62876116 682 - +13141 hg18.chr22_insert 1 hg18.chr22 17042366 17042366 3421 - panTro2.chr22 17112648 17112649 3407 - rheMac2.chr10 62876302 62876303 3457 - +13141 hg18.chr22_insert 1 hg18.chr22 17043272 17043272 3421 - panTro2.chr22 17113553 17113554 3407 - rheMac2.chr10 62877210 62877211 3457 - +13141 hg18.chr22_insert 9 hg18.chr22 17045130 17045138 3421 - panTro2.chr22 17115407 17115408 3407 - rheMac2.chr10 62879103 62879104 3457 - +13191 hg18.chr22_insert 1 hg18.chr22 17151455 17151455 874 - panTro2.chr22_random 441659 441660 873 - rheMac2.chr10 68032010 68032011 875 + +13201 hg18.chr22_insert 3 hg18.chr22 17153765 17153767 47 - panTro2.chr22_random 443969 443970 44 - rheMac2.chr10 68028537 68028538 38 + +13223 hg18.chr22_insert 2 hg18.chr22 17161992 17161993 745 - panTro2.chr22_random 452560 452561 742 - rheMac2.chr1 119588418 119588419 743 - +13223 hg18.chr22_insert 1 hg18.chr22 17162547 17162547 745 - panTro2.chr22_random 453113 453114 742 - rheMac2.chr1 119588972 119588973 743 - +13237 hg18.chr22_insert 1 hg18.chr22 17166970 17166970 1063 - panTro2.chr22_random 457508 457509 1063 - rheMac2.chr1 119593146 119593147 1082 - +13416 hg18.chr22_insert 1 hg18.chr22 17338877 17338877 201 + panTro2.chr22 17402498 17402499 200 + rheMac2.chr10 64341154 64341155 200 - +13427 hg18.chr22_insert 1 hg18.chr22 17341796 17341796 623 + panTro2.chr22 17405397 17405398 612 + rheMac2.chr10 64338748 64338749 612 - +13443 hg18.chr22_insert 1 hg18.chr22 17338877 17338877 201 + panTro2.chr22 17402498 17402499 200 + rheMac2.chr10 64341154 64341155 200 - +13454 hg18.chr22_insert 1 hg18.chr22 17341796 17341796 623 + panTro2.chr22 17405397 17405398 612 + rheMac2.chr10 64338748 64338749 612 - +13485 hg18.chr22_insert 1 hg18.chr22 17391835 17391835 240 + panTro2.chr22 17459060 17459061 242 + rheMac2.chr10 63068058 63068059 229 + +13505 hg18.chr22_insert 1 hg18.chr22 17396022 17396022 164 + panTro2.chr22 17463404 17463405 163 + rheMac2.chr10 63072427 63072428 181 + +13509 hg18.chr22_insert 5 hg18.chr22 17396407 17396411 135 + panTro2.chr22 17463806 17463807 130 + rheMac2.chr10 63072821 63072822 130 + +13510 hg18.chr22_insert 1 hg18.chr22 17397278 17397278 908 + panTro2.chr22 17464671 17464672 905 + rheMac2.chr10 63073685 63073686 904 + +13510 hg18.chr22_insert 1 hg18.chr22 17397315 17397315 908 + panTro2.chr22 17464707 17464708 905 + rheMac2.chr10 63073721 63073722 904 + +13558 hg18.chr22_insert 1 hg18.chr22 17412639 17412639 211 - panTro2.chr22 17480312 17480313 210 - rheMac2.chr10 63087669 63087670 208 - +13608 hg18.chr22_insert 1 hg18.chr22 17424115 17424115 44 - panTro2.chr22 17492079 17492080 43 - rheMac2.chr10 63097385 63097386 38 - +13693 hg18.chr22_insert 1 hg18.chr22 17447105 17447105 1273 - panTro2.chr22 17515547 17515548 1289 - rheMac2.chr10 63118012 63118013 1276 - +13700 hg18.chr22_insert 7 hg18.chr22 17450022 17450028 352 - panTro2.chr22 17518457 17518458 329 - rheMac2.chr10 63120807 63120808 340 - +13720 hg18.chr22_insert 1 hg18.chr22 17459830 17459830 1217 - panTro2.chr22 17526121 17526122 1222 - rheMac2.chr10 63131517 63131518 1299 - +13771 hg18.chr22_insert 17 hg18.chr22 17475959 17475975 183 - panTro2.chr22 17542820 17542821 166 - rheMac2.chr10 63147652 63147653 166 - +13799 hg18.chr22_insert 1 hg18.chr22 17479961 17479961 232 - panTro2.chr22 17549031 17549032 231 - rheMac2.chr10 63151672 63151673 241 - +13834 hg18.chr22_insert 4 hg18.chr22 17486131 17486134 235 - panTro2.chr22 17555653 17555654 222 - rheMac2.chr10 63158313 63158314 231 - +13854 hg18.chr22_insert 5 hg18.chr22 17489626 17489630 349 - panTro2.chr22 17559143 17559144 357 - rheMac2.chr10 63161483 63161484 358 - +13894 hg18.chr22_insert 1 hg18.chr22 17412639 17412639 211 - panTro2.chr22 17480312 17480313 210 - rheMac2.chr10 63087669 63087670 208 - +13944 hg18.chr22_insert 1 hg18.chr22 17424115 17424115 44 - panTro2.chr22 17492079 17492080 43 - rheMac2.chr10 63097385 63097386 38 - +14029 hg18.chr22_insert 1 hg18.chr22 17447105 17447105 1273 - panTro2.chr22 17515547 17515548 1289 - rheMac2.chr10 63118012 63118013 1276 - +14036 hg18.chr22_insert 7 hg18.chr22 17450022 17450028 352 - panTro2.chr22 17518457 17518458 329 - rheMac2.chr10 63120807 63120808 340 - +14056 hg18.chr22_insert 1 hg18.chr22 17459830 17459830 1217 - panTro2.chr22 17526121 17526122 1222 - rheMac2.chr10 63131517 63131518 1299 - +14107 hg18.chr22_insert 17 hg18.chr22 17475959 17475975 183 - panTro2.chr22 17542820 17542821 166 - rheMac2.chr10 63147652 63147653 166 - +14135 hg18.chr22_insert 1 hg18.chr22 17479961 17479961 232 - panTro2.chr22 17549031 17549032 231 - rheMac2.chr10 63151672 63151673 241 - +14170 hg18.chr22_insert 4 hg18.chr22 17486131 17486134 235 - panTro2.chr22 17555653 17555654 222 - rheMac2.chr10 63158313 63158314 231 - +14190 hg18.chr22_insert 5 hg18.chr22 17489626 17489630 349 - panTro2.chr22 17559143 17559144 357 - rheMac2.chr10 63161483 63161484 358 - +14219 hg18.chr22_insert 3 hg18.chr22 17503413 17503415 755 - panTro2.chr22 17573224 17573225 690 - rheMac2.chr10 63177005 63177006 818 - +14233 hg18.chr22_insert 16 hg18.chr22 17506135 17506150 56 - panTro2.chr22 17575863 17575864 40 - rheMac2.chr10 63180040 63180041 40 - +14238 hg18.chr22_insert 4 hg18.chr22 17507604 17507607 911 - panTro2.chr22 17577316 17577317 907 - rheMac2.chr10 63181508 63181509 908 - +14280 hg18.chr22_insert 3 hg18.chr22 17503413 17503415 755 - panTro2.chr22 17573224 17573225 690 - rheMac2.chr10 63177005 63177006 818 - +14294 hg18.chr22_insert 16 hg18.chr22 17506135 17506150 56 - panTro2.chr22 17575863 17575864 40 - rheMac2.chr10 63180040 63180041 40 - +14299 hg18.chr22_insert 4 hg18.chr22 17507604 17507607 911 - panTro2.chr22 17577316 17577317 907 - rheMac2.chr10 63181508 63181509 908 - +14341 hg18.chr22_insert 3 hg18.chr22 17503413 17503415 755 - panTro2.chr22 17573224 17573225 690 - rheMac2.chr10 63177005 63177006 818 - +14355 hg18.chr22_insert 16 hg18.chr22 17506135 17506150 56 - panTro2.chr22 17575863 17575864 40 - rheMac2.chr10 63180040 63180041 40 - +14360 hg18.chr22_insert 4 hg18.chr22 17507604 17507607 911 - panTro2.chr22 17577316 17577317 907 - rheMac2.chr10 63181508 63181509 908 - +14568 hg18.chr22_insert 1 hg18.chr22 17580958 17580958 452 - panTro2.chr22 17653936 17653937 451 - rheMac2.chr10 63257158 63257159 449 - +14569 hg18.chr22_insert 1 hg18.chr22 17581278 17581278 305 - panTro2.chr22 17654255 17654256 304 - rheMac2.chr10 63257463 63257464 285 - +14727 hg18.chr22_insert 5 hg18.chr22 17615102 17615106 100 - panTro2.chr22 17688477 17688478 95 - rheMac2.chr10 63294914 63294915 63 - +14849 hg18.chr22_insert 3 hg18.chr22 17655516 17655518 242 - panTro2.chr22 17728985 17728986 239 - rheMac2.chr10 63334719 63334720 241 - +15019 hg18.chr22_insert 1 hg18.chr22 17580958 17580958 452 - panTro2.chr22 17653936 17653937 451 - rheMac2.chr10 63257158 63257159 449 - +15020 hg18.chr22_insert 1 hg18.chr22 17581278 17581278 305 - panTro2.chr22 17654255 17654256 304 - rheMac2.chr10 63257463 63257464 285 - +15178 hg18.chr22_insert 5 hg18.chr22 17615102 17615106 100 - panTro2.chr22 17688477 17688478 95 - rheMac2.chr10 63294914 63294915 63 - +15300 hg18.chr22_insert 3 hg18.chr22 17655516 17655518 242 - panTro2.chr22 17728985 17728986 239 - rheMac2.chr10 63334719 63334720 241 - +15444 hg18.chr22_insert 1 hg18.chr22 17580958 17580958 452 - panTro2.chr22 17653936 17653937 451 - rheMac2.chr10 63257158 63257159 449 - +15445 hg18.chr22_insert 1 hg18.chr22 17581278 17581278 305 - panTro2.chr22 17654255 17654256 304 - rheMac2.chr10 63257463 63257464 285 - +15529 hg18.chr22_insert 1 hg18.chr22 17580958 17580958 452 - panTro2.chr22 17653936 17653937 451 - rheMac2.chr10 63257158 63257159 449 - +15530 hg18.chr22_insert 1 hg18.chr22 17581278 17581278 305 - panTro2.chr22 17654255 17654256 304 - rheMac2.chr10 63257463 63257464 285 - +15606 hg18.chr22_insert 1 hg18.chr22 17722997 17722997 1113 - panTro2.chr22 17797123 17797124 1113 - rheMac2.chr10 63397652 63397653 1112 - +15642 hg18.chr22_insert 1 hg18.chr22 17735960 17735960 30 - panTro2.chr22 17810538 17810539 29 - rheMac2.chr10 63410419 63410420 29 - +15686 hg18.chr22_insert 1 hg18.chr22 17748051 17748051 180 - panTro2.chr22 17822617 17822618 179 - rheMac2.chr10 63422579 63422580 179 - +15687 hg18.chr22_insert 21 hg18.chr22 17748297 17748317 323 - panTro2.chr22 17822862 17822863 302 - rheMac2.chr10 63422821 63422822 303 - +15749 hg18.chr22_insert 7 hg18.chr22 17759053 17759059 63 - panTro2.chr22 17833578 17833579 56 - rheMac2.chr10 63433510 63433511 56 - +15887 hg18.chr22_insert 1 hg18.chr22 17787902 17787902 193 - panTro2.chr22 17863657 17863658 200 - rheMac2.chr10 63463580 63463581 155 - +15913 hg18.chr22_insert 2 hg18.chr22 17793401 17793402 177 - panTro2.chr22 17870348 17870349 175 - rheMac2.chr10 63468990 63468991 168 - +16010 hg18.chr22_insert 1 hg18.chr22 17722997 17722997 1113 - panTro2.chr22 17797123 17797124 1113 - rheMac2.chr10 63397652 63397653 1112 - +16046 hg18.chr22_insert 1 hg18.chr22 17735960 17735960 30 - panTro2.chr22 17810538 17810539 29 - rheMac2.chr10 63410419 63410420 29 - +16090 hg18.chr22_insert 1 hg18.chr22 17748051 17748051 180 - panTro2.chr22 17822617 17822618 179 - rheMac2.chr10 63422579 63422580 179 - +16091 hg18.chr22_insert 21 hg18.chr22 17748297 17748317 323 - panTro2.chr22 17822862 17822863 302 - rheMac2.chr10 63422821 63422822 303 - +16153 hg18.chr22_insert 7 hg18.chr22 17759053 17759059 63 - panTro2.chr22 17833578 17833579 56 - rheMac2.chr10 63433510 63433511 56 - +16291 hg18.chr22_insert 1 hg18.chr22 17787902 17787902 193 - panTro2.chr22 17863657 17863658 200 - rheMac2.chr10 63463580 63463581 155 - +16317 hg18.chr22_insert 2 hg18.chr22 17793401 17793402 177 - panTro2.chr22 17870348 17870349 175 - rheMac2.chr10 63468990 63468991 168 - +16414 hg18.chr22_insert 1 hg18.chr22 17722997 17722997 1113 - panTro2.chr22 17797123 17797124 1113 - rheMac2.chr10 63397652 63397653 1112 - +16450 hg18.chr22_insert 1 hg18.chr22 17735960 17735960 30 - panTro2.chr22 17810538 17810539 29 - rheMac2.chr10 63410419 63410420 29 - +16494 hg18.chr22_insert 1 hg18.chr22 17748051 17748051 180 - panTro2.chr22 17822617 17822618 179 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113 - +16798 hg18.chr22_insert 1 hg18.chr22 17810354 17810354 296 - panTro2.chr22 17887264 17887265 295 - rheMac2.chr10 63486677 63486678 292 - +16822 hg18.chr22_insert 2 hg18.chr22 17814431 17814432 121 - panTro2.chr22 17891561 17891562 119 - rheMac2.chr10 63490712 63490713 119 - +16825 hg18.chr22_insert 2 hg18.chr22 17814696 17814697 77 - panTro2.chr22 17891824 17891825 75 - rheMac2.chr10 63490975 63490976 75 - +16854 hg18.chr22_insert 7 hg18.chr22 17759053 17759059 63 - panTro2.chr22 17833578 17833579 56 - rheMac2.chr10 63433510 63433511 56 - +16992 hg18.chr22_insert 1 hg18.chr22 17787902 17787902 193 - panTro2.chr22 17863657 17863658 200 - rheMac2.chr10 63463580 63463581 155 - +17018 hg18.chr22_insert 2 hg18.chr22 17793401 17793402 177 - panTro2.chr22 17870348 17870349 175 - rheMac2.chr10 63468990 63468991 168 - +17062 hg18.chr22_insert 7 hg18.chr22 17801387 17801393 295 - panTro2.chr22 17878307 17878308 300 - rheMac2.chr10 63477135 63477136 295 - +17069 hg18.chr22_insert 1 hg18.chr22 17802939 17802939 214 - panTro2.chr22 17879855 17879856 210 - rheMac2.chr10 63478679 63478680 213 - +17076 hg18.chr22_insert 2 hg18.chr22 17804291 17804292 112 - panTro2.chr22 17881211 17881212 111 - rheMac2.chr10 63480039 63480040 113 - +17095 hg18.chr22_insert 1 hg18.chr22 17810354 17810354 296 - panTro2.chr22 17887264 17887265 295 - rheMac2.chr10 63486677 63486678 292 - +17119 hg18.chr22_insert 2 hg18.chr22 17814431 17814432 121 - panTro2.chr22 17891561 17891562 119 - rheMac2.chr10 63490712 63490713 119 - +17122 hg18.chr22_insert 2 hg18.chr22 17814696 17814697 77 - panTro2.chr22 17891824 17891825 75 - rheMac2.chr10 63490975 63490976 75 - +17136 hg18.chr22_insert 7 hg18.chr22 17801504 17801510 295 + panTro2.chr22 17878424 17878425 300 + rheMac2.chr10 63477255 63477256 295 + +17143 hg18.chr22_insert 1 hg18.chr22 17802891 17802891 214 + panTro2.chr22 17879810 17879811 210 + rheMac2.chr10 63478631 63478632 213 + +17156 hg18.chr22_insert 7 hg18.chr22 17801504 17801510 295 + panTro2.chr22 17878424 17878425 300 + rheMac2.chr10 63477255 63477256 295 + +17163 hg18.chr22_insert 1 hg18.chr22 17802891 17802891 214 + panTro2.chr22 17879810 17879811 210 + rheMac2.chr10 63478631 63478632 213 + +17173 hg18.chr22_insert 1 hg18.chr22 17810354 17810354 296 - panTro2.chr22 17887264 17887265 295 - rheMac2.chr10 63486677 63486678 292 - +17197 hg18.chr22_insert 2 hg18.chr22 17814431 17814432 121 - panTro2.chr22 17891561 17891562 119 - rheMac2.chr10 63490712 63490713 119 - +17200 hg18.chr22_insert 2 hg18.chr22 17814696 17814697 77 - panTro2.chr22 17891824 17891825 75 - rheMac2.chr10 63490975 63490976 75 - +17210 hg18.chr22_insert 1 hg18.chr22 17810354 17810354 296 - panTro2.chr22 17887264 17887265 295 - rheMac2.chr10 63486677 63486678 292 - +17240 hg18.chr22_insert 2 hg18.chr22 17814431 17814432 121 - panTro2.chr22 17891561 17891562 119 - rheMac2.chr10 63490712 63490713 119 - +17243 hg18.chr22_insert 2 hg18.chr22 17814696 17814697 77 - panTro2.chr22 17891824 17891825 75 - rheMac2.chr10 63490975 63490976 75 - +17371 hg18.chr22_insert 16 hg18.chr22 17839928 17839943 614 - panTro2.chr22 17917387 17917388 598 - rheMac2.chr10 63518085 63518086 597 - +17401 hg18.chr22_insert 1 hg18.chr22 17845924 17845924 354 - panTro2.chr22 17923926 17923927 352 - rheMac2.chr10 63524004 63524005 350 - +17515 hg18.chr22_insert 16 hg18.chr22 17839928 17839943 614 - panTro2.chr22 17917387 17917388 598 - rheMac2.chr10 63518085 63518086 597 - +17545 hg18.chr22_insert 1 hg18.chr22 17845924 17845924 354 - panTro2.chr22 17923926 17923927 352 - rheMac2.chr10 63524004 63524005 350 - +17659 hg18.chr22_insert 16 hg18.chr22 17839928 17839943 614 - panTro2.chr22 17917387 17917388 598 - rheMac2.chr10 63518085 63518086 597 - +17689 hg18.chr22_insert 1 hg18.chr22 17845924 17845924 354 - panTro2.chr22 17923926 17923927 352 - rheMac2.chr10 63524004 63524005 350 - +17803 hg18.chr22_insert 16 hg18.chr22 17839928 17839943 614 - panTro2.chr22 17917387 17917388 598 - rheMac2.chr10 63518085 63518086 597 - +17833 hg18.chr22_insert 1 hg18.chr22 17845924 17845924 354 - panTro2.chr22 17923926 17923927 352 - rheMac2.chr10 63524004 63524005 350 - +17887 hg18.chr22_insert 16 hg18.chr22 17839928 17839943 614 - panTro2.chr22 17917387 17917388 598 - rheMac2.chr10 63518085 63518086 597 - +17917 hg18.chr22_insert 1 hg18.chr22 17845924 17845924 354 - panTro2.chr22 17923926 17923927 352 - rheMac2.chr10 63524004 63524005 350 - +17929 hg18.chr22_insert 10 hg18.chr22 17848793 17848802 103 + panTro2.chr22 17926792 17926793 92 + rheMac2.chr10 63526855 63526856 94 + +17930 hg18.chr22_insert 1 hg18.chr22 17848904 17848904 276 + panTro2.chr22 17926892 17926893 275 + rheMac2.chr10 63527001 63527002 320 + +17997 hg18.chr22_insert 11 hg18.chr22 17860750 17860760 55 + panTro2.chr22 17939006 17939007 44 + rheMac2.chr10 63541614 63541615 39 + +18065 hg18.chr22_insert 1 hg18.chr22 17872409 17872409 919 + panTro2.chr22 17950707 17950708 918 + rheMac2.chr10 63552987 63552988 908 + +18069 hg18.chr22_insert 1 hg18.chr22 17873343 17873343 705 + panTro2.chr22 17951652 17951653 702 + rheMac2.chr10 63553938 63553939 694 + +18132 hg18.chr22_insert 11 hg18.chr22 17884656 17884666 555 + panTro2.chr22 17964078 17964079 544 + rheMac2.chr10 63565753 63565754 546 + +18152 hg18.chr22_insert 10 hg18.chr22 17848793 17848802 103 + panTro2.chr22 17926792 17926793 92 + rheMac2.chr10 63526855 63526856 94 + +18153 hg18.chr22_insert 1 hg18.chr22 17848904 17848904 276 + panTro2.chr22 17926892 17926893 275 + rheMac2.chr10 63527001 63527002 320 + +18220 hg18.chr22_insert 11 hg18.chr22 17860750 17860760 55 + panTro2.chr22 17939006 17939007 44 + rheMac2.chr10 63541614 63541615 39 + +18288 hg18.chr22_insert 1 hg18.chr22 17872409 17872409 919 + panTro2.chr22 17950707 17950708 918 + rheMac2.chr10 63552987 63552988 908 + +18292 hg18.chr22_insert 1 hg18.chr22 17873343 17873343 705 + panTro2.chr22 17951652 17951653 702 + rheMac2.chr10 63553938 63553939 694 + +18355 hg18.chr22_insert 11 hg18.chr22 17884656 17884666 555 + panTro2.chr22 17964078 17964079 544 + rheMac2.chr10 63565753 63565754 546 + +18375 hg18.chr22_insert 10 hg18.chr22 17848793 17848802 103 + panTro2.chr22 17926792 17926793 92 + rheMac2.chr10 63526855 63526856 94 + +18376 hg18.chr22_insert 1 hg18.chr22 17848904 17848904 276 + panTro2.chr22 17926892 17926893 275 + rheMac2.chr10 63527001 63527002 320 + +18443 hg18.chr22_insert 11 hg18.chr22 17860750 17860760 55 + panTro2.chr22 17939006 17939007 44 + rheMac2.chr10 63541614 63541615 39 + +18511 hg18.chr22_insert 1 hg18.chr22 17872409 17872409 919 + panTro2.chr22 17950707 17950708 918 + rheMac2.chr10 63552987 63552988 908 + +18515 hg18.chr22_insert 1 hg18.chr22 17873343 17873343 705 + panTro2.chr22 17951652 17951653 702 + rheMac2.chr10 63553938 63553939 694 + +18578 hg18.chr22_insert 11 hg18.chr22 17884656 17884666 555 + panTro2.chr22 17964078 17964079 544 + rheMac2.chr10 63565753 63565754 546 + +18597 hg18.chr22_insert 1 hg18.chr22 17892550 17892550 373 - panTro2.chr22 17972117 17972118 372 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432 + +18727 hg18.chr22_insert 1 hg18.chr22 18089631 18089631 440 + panTro2.chr22 18177935 18177936 441 + rheMac2.chr10 63770558 63770559 432 + +18743 hg18.chr22_insert 5 hg18.chr22 18126939 18126943 624 + panTro2.chr22 18216195 18216196 619 + rheMac2.chr10 63807231 63807232 619 + +18775 hg18.chr22_insert 5 hg18.chr22 18126939 18126943 624 + panTro2.chr22 18216195 18216196 619 + rheMac2.chr10 63807231 63807232 619 + +18816 hg18.chr22_insert 1 hg18.chr22 18137933 18137933 231 + panTro2.chr22 18228313 18228314 230 + rheMac2.chr10 63818230 63818231 230 + +18848 hg18.chr22_insert 6 hg18.chr22 18146582 18146587 210 + panTro2.chr22 18237482 18237483 204 + rheMac2.chr10 63826961 63826962 202 + +18857 hg18.chr22_insert 5 hg18.chr22 18126939 18126943 624 + panTro2.chr22 18216195 18216196 619 + rheMac2.chr10 63807231 63807232 619 + +18898 hg18.chr22_insert 1 hg18.chr22 18137933 18137933 231 + panTro2.chr22 18228313 18228314 230 + rheMac2.chr10 63818230 63818231 230 + +18930 hg18.chr22_insert 6 hg18.chr22 18146582 18146587 210 + panTro2.chr22 18237482 18237483 204 + rheMac2.chr10 63826961 63826962 202 + +18960 hg18.chr22_insert 1 hg18.chr22 18157755 18157755 492 - panTro2.chr22 18249462 18249463 491 - rheMac2.chr10 63839719 63839720 501 - +18969 hg18.chr22_insert 1 hg18.chr22 18159147 18159147 121 - panTro2.chr22 18250853 18250854 120 - rheMac2.chr10 63841109 63841110 120 - +18974 hg18.chr22_insert 1 hg18.chr22 18161453 18161453 206 - panTro2.chr22 18253160 18253161 207 - rheMac2.chr10 63842527 63842528 205 - +19014 hg18.chr22_insert 1 hg18.chr22 18172454 18172454 365 - panTro2.chr22 18264614 18264615 365 - rheMac2.chr10 63854101 63854102 387 - +19074 hg18.chr22_insert 2 hg18.chr22 18188650 18188651 618 - panTro2.chr22 18281083 18281084 612 - rheMac2.chr10 63870971 63870972 600 - +19074 hg18.chr22_insert 4 hg18.chr22 18189116 18189119 618 - panTro2.chr22 18281547 18281548 612 - rheMac2.chr10 63871423 63871424 600 - +19080 hg18.chr22_insert 8 hg18.chr22 18190974 18190981 714 - panTro2.chr22 18283417 18283418 706 - rheMac2.chr10 63873282 63873283 712 - +19090 hg18.chr22_insert 1 hg18.chr22 18193197 18193197 509 - panTro2.chr22 18285632 18285633 508 - rheMac2.chr10 63875508 63875509 504 - +19108 hg18.chr22_insert 1 hg18.chr22 18198553 18198553 421 - panTro2.chr22 18291504 18291505 420 - rheMac2.chr10 63881870 63881871 410 - +19115 hg18.chr22_insert 3 hg18.chr22 18201254 18201256 211 - panTro2.chr22 18294200 18294201 208 - rheMac2.chr10 63884826 63884827 213 - +19127 hg18.chr22_insert 2 hg18.chr22 18205514 18205515 1938 - panTro2.chr22 18298821 18298822 1932 - rheMac2.chr10 63889078 63889079 1998 - +19139 hg18.chr22_insert 3 hg18.chr22 18209551 18209553 290 - panTro2.chr22 18302844 18302845 287 - rheMac2.chr10 63893216 63893217 288 - +19151 hg18.chr22_insert 1 hg18.chr22 18213559 18213559 673 - panTro2.chr22 18307198 18307199 678 - rheMac2.chr10 63897121 63897122 674 - +19196 hg18.chr22_insert 1 hg18.chr22 18157755 18157755 492 - panTro2.chr22 18249462 18249463 491 - rheMac2.chr10 63839719 63839720 501 - +19205 hg18.chr22_insert 1 hg18.chr22 18159147 18159147 121 - panTro2.chr22 18250853 18250854 120 - rheMac2.chr10 63841109 63841110 120 - +19210 hg18.chr22_insert 1 hg18.chr22 18161453 18161453 206 - panTro2.chr22 18253160 18253161 207 - rheMac2.chr10 63842527 63842528 205 - +19250 hg18.chr22_insert 1 hg18.chr22 18172454 18172454 365 - panTro2.chr22 18264614 18264615 365 - rheMac2.chr10 63854101 63854102 387 - +19310 hg18.chr22_insert 2 hg18.chr22 18188650 18188651 618 - panTro2.chr22 18281083 18281084 612 - rheMac2.chr10 63870971 63870972 600 - +19310 hg18.chr22_insert 4 hg18.chr22 18189116 18189119 618 - panTro2.chr22 18281547 18281548 612 - rheMac2.chr10 63871423 63871424 600 - +19316 hg18.chr22_insert 8 hg18.chr22 18190974 18190981 714 - panTro2.chr22 18283417 18283418 706 - rheMac2.chr10 63873282 63873283 712 - +19326 hg18.chr22_insert 1 hg18.chr22 18193197 18193197 509 - panTro2.chr22 18285632 18285633 508 - rheMac2.chr10 63875508 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18201254 18201256 211 - panTro2.chr22 18294200 18294201 208 - rheMac2.chr10 63884826 63884827 213 - +19599 hg18.chr22_insert 2 hg18.chr22 18205514 18205515 1938 - panTro2.chr22 18298821 18298822 1932 - rheMac2.chr10 63889078 63889079 1998 - +19611 hg18.chr22_insert 3 hg18.chr22 18209551 18209553 290 - panTro2.chr22 18302844 18302845 287 - rheMac2.chr10 63893216 63893217 288 - +19623 hg18.chr22_insert 1 hg18.chr22 18213559 18213559 673 - panTro2.chr22 18307198 18307199 678 - rheMac2.chr10 63897121 63897122 674 - +19660 hg18.chr22_insert 1 hg18.chr22 18213842 18213842 390 - panTro2.chr22 18307487 18307488 389 - rheMac2.chr10 63897408 63897409 387 - +19696 hg18.chr22_insert 1 hg18.chr22 18213842 18213842 390 - panTro2.chr22 18307487 18307488 389 - rheMac2.chr10 63897408 63897409 387 - +19733 hg18.chr22_insert 1 hg18.chr22 18213842 18213842 390 - panTro2.chr22 18307487 18307488 389 - rheMac2.chr10 63897408 63897409 387 - +19770 hg18.chr22_insert 1 hg18.chr22 18213852 18213852 380 - panTro2.chr22 18307497 18307498 379 - rheMac2.chr10 63897418 63897419 377 - +19912 hg18.chr22_insert 4 hg18.chr22 18265908 18265911 138 - panTro2.chr22 18363070 18363071 135 - rheMac2.chr10 63952561 63952562 134 - +19961 hg18.chr22_insert 1 hg18.chr22 18279971 18279971 1467 - panTro2.chr22 18378070 18378071 1465 - rheMac2.chr10 63965115 63965116 1463 - +20016 hg18.chr22_insert 1 hg18.chr22 18292119 18292119 723 - panTro2.chr22 18391642 18391643 722 - rheMac2.chr10 63979319 63979320 722 - +20147 hg18.chr22_insert 4 hg18.chr22 18265908 18265911 138 - panTro2.chr22 18363070 18363071 135 - rheMac2.chr10 63952561 63952562 134 - +20196 hg18.chr22_insert 1 hg18.chr22 18279971 18279971 1467 - panTro2.chr22 18378070 18378071 1465 - rheMac2.chr10 63965115 63965116 1463 - +20251 hg18.chr22_insert 1 hg18.chr22 18292119 18292119 723 - panTro2.chr22 18391642 18391643 722 - rheMac2.chr10 63979319 63979320 722 - +20289 hg18.chr22_insert 2 hg18.chr22 18301862 18301863 96 - panTro2.chr22 18401718 18401719 99 - rheMac2.chr10 63989063 63989064 97 - +20410 hg18.chr22_insert 4 hg18.chr22 18265908 18265911 138 - panTro2.chr22 18363070 18363071 135 - rheMac2.chr10 63952561 63952562 134 - +20459 hg18.chr22_insert 1 hg18.chr22 18279971 18279971 1467 - panTro2.chr22 18378070 18378071 1465 - rheMac2.chr10 63965115 63965116 1463 - +20514 hg18.chr22_insert 1 hg18.chr22 18292119 18292119 723 - panTro2.chr22 18391642 18391643 722 - rheMac2.chr10 63979319 63979320 722 - +20552 hg18.chr22_insert 2 hg18.chr22 18301862 18301863 96 - panTro2.chr22 18401718 18401719 99 - rheMac2.chr10 63989063 63989064 97 - +20673 hg18.chr22_insert 4 hg18.chr22 18265908 18265911 138 - panTro2.chr22 18363070 18363071 135 - rheMac2.chr10 63952561 63952562 134 - +20722 hg18.chr22_insert 1 hg18.chr22 18279971 18279971 1467 - panTro2.chr22 18378070 18378071 1465 - rheMac2.chr10 63965115 63965116 1463 - +20777 hg18.chr22_insert 1 hg18.chr22 18292119 18292119 723 - panTro2.chr22 18391642 18391643 722 - rheMac2.chr10 63979319 63979320 722 - +20815 hg18.chr22_insert 2 hg18.chr22 18301862 18301863 96 - panTro2.chr22 18401718 18401719 99 - rheMac2.chr10 63989063 63989064 97 - +20936 hg18.chr22_insert 4 hg18.chr22 18265908 18265911 138 - panTro2.chr22 18363070 18363071 135 - rheMac2.chr10 63952561 63952562 134 - +20985 hg18.chr22_insert 1 hg18.chr22 18279971 18279971 1467 - panTro2.chr22 18378070 18378071 1465 - rheMac2.chr10 63965115 63965116 1463 - +21040 hg18.chr22_insert 1 hg18.chr22 18292119 18292119 723 - panTro2.chr22 18391642 18391643 722 - rheMac2.chr10 63979319 63979320 722 - +21078 hg18.chr22_insert 2 hg18.chr22 18301862 18301863 96 - panTro2.chr22 18401718 18401719 99 - rheMac2.chr10 63989063 63989064 97 - +21199 hg18.chr22_insert 4 hg18.chr22 18265908 18265911 138 - panTro2.chr22 18363070 18363071 135 - rheMac2.chr10 63952561 63952562 134 - +21248 hg18.chr22_insert 1 hg18.chr22 18279971 18279971 1467 - panTro2.chr22 18378070 18378071 1465 - rheMac2.chr10 63965115 63965116 1463 - +21303 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18279971 18279971 1467 - panTro2.chr22 18378070 18378071 1465 - rheMac2.chr10 63965115 63965116 1463 - +21857 hg18.chr22_insert 1 hg18.chr22 18292119 18292119 723 - panTro2.chr22 18391642 18391643 722 - rheMac2.chr10 63979319 63979320 722 - +21895 hg18.chr22_insert 2 hg18.chr22 18301862 18301863 96 - panTro2.chr22 18401718 18401719 99 - rheMac2.chr10 63989063 63989064 97 - +21938 hg18.chr22_insert 4 hg18.chr22 18265908 18265911 138 - panTro2.chr22 18363070 18363071 135 - rheMac2.chr10 63952561 63952562 134 - +21987 hg18.chr22_insert 1 hg18.chr22 18279971 18279971 1467 - panTro2.chr22 18378070 18378071 1465 - rheMac2.chr10 63965115 63965116 1463 - +22042 hg18.chr22_insert 1 hg18.chr22 18292119 18292119 723 - panTro2.chr22 18391642 18391643 722 - rheMac2.chr10 63979319 63979320 722 - +22101 hg18.chr22_insert 4 hg18.chr22 18265908 18265911 138 - panTro2.chr22 18363070 18363071 135 - rheMac2.chr10 63952561 63952562 134 - +22150 hg18.chr22_insert 1 hg18.chr22 18279971 18279971 1467 - panTro2.chr22 18378070 18378071 1465 - rheMac2.chr10 63965115 63965116 1463 - +22205 hg18.chr22_insert 1 hg18.chr22 18292119 18292119 723 - panTro2.chr22 18391642 18391643 722 - rheMac2.chr10 63979319 63979320 722 - +22243 hg18.chr22_insert 2 hg18.chr22 18301862 18301863 96 - panTro2.chr22 18401718 18401719 99 - rheMac2.chr10 63989063 63989064 97 - +22270 hg18.chr22_insert 4 hg18.chr22 18311209 18311212 180 + panTro2.chr22 18411083 18411084 176 + rheMac2.chr10 63999232 63999233 175 + +22356 hg18.chr22_insert 4 hg18.chr22 18311209 18311212 180 + panTro2.chr22 18411083 18411084 176 + rheMac2.chr10 63999232 63999233 175 + +22459 hg18.chr22_insert 4 hg18.chr22 18311209 18311212 180 + panTro2.chr22 18411083 18411084 176 + rheMac2.chr10 63999232 63999233 175 + +22562 hg18.chr22_insert 4 hg18.chr22 18311209 18311212 180 + panTro2.chr22 18411083 18411084 176 + rheMac2.chr10 63999232 63999233 175 + +22741 hg18.chr22_insert 9 hg18.chr22 18344963 18344971 435 - panTro2.chr22 18445407 18445408 426 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246 + panTro2.chr22 18621954 18621955 240 + rheMac2.chr10 64211172 64211173 262 + +25520 hg18.chr22_insert 1 hg18.chr22 18513662 18513662 246 + panTro2.chr22 18625727 18625728 245 + rheMac2.chr10 64215241 64215242 274 + +25610 hg18.chr22_insert 1 hg18.chr22 18621580 18621580 221 - panTro2.chr22 18738991 18738992 220 - rheMac2.chr10 64327360 64327361 224 - +25618 hg18.chr22_insert 1 hg18.chr22 18622911 18622911 129 - panTro2.chr22 18740306 18740307 111 - rheMac2.chr10 64328725 64328726 125 - +25656 hg18.chr22_insert 8 hg18.chr22 18631289 18631296 670 - panTro2.chr22 18748743 18748744 656 - rheMac2.chr10 64337747 64337748 682 - +25828 hg18.chr22_insert 1 hg18.chr22 19092093 19092093 307 + panTro2.chr22 19086970 19086971 306 + rheMac2.chr10 64494040 64494041 306 + +25885 hg18.chr22_insert 1 hg18.chr22 19092093 19092093 307 + panTro2.chr22 19086970 19086971 306 + rheMac2.chr10 64494040 64494041 306 + +25942 hg18.chr22_insert 1 hg18.chr22 19092093 19092093 307 + panTro2.chr22 19086970 19086971 306 + rheMac2.chr10 64494040 64494041 306 + +25999 hg18.chr22_insert 1 hg18.chr22 19092093 19092093 307 + panTro2.chr22 19086970 19086971 306 + rheMac2.chr10 64494040 64494041 306 + +26056 hg18.chr22_insert 1 hg18.chr22 19092093 19092093 307 + panTro2.chr22 19086970 19086971 306 + rheMac2.chr10 64494040 64494041 306 + +26065 hg18.chr22_insert 10 hg18.chr22 19112767 19112776 458 - panTro2.chr22 19108521 19108522 453 - rheMac2.chr10 64520187 64520188 363 - +26065 hg18.chr22_insert 12 hg18.chr22 19112795 19112806 458 - panTro2.chr22 19108539 19108540 453 - rheMac2.chr10 64520205 64520206 363 - +26111 hg18.chr22_insert 10 hg18.chr22 19112767 19112776 458 - panTro2.chr22 19108521 19108522 453 - rheMac2.chr10 64520187 64520188 363 - +26111 hg18.chr22_insert 12 hg18.chr22 19112795 19112806 458 - panTro2.chr22 19108539 19108540 453 - rheMac2.chr10 64520205 64520206 363 - +26151 hg18.chr22_insert 1 hg18.chr22 19126842 19126842 432 - panTro2.chr22 19123022 19123023 430 - rheMac2.chr10 64534542 64534543 432 - +26208 hg18.chr22_insert 31 hg18.chr22 19141289 19141319 60 - panTro2.chr22 19137926 19137927 29 - rheMac2.chr10 64549212 64549213 29 - +26237 hg18.chr22_insert 4 hg18.chr22 19146062 19146065 151 - panTro2.chr22 19144339 19144340 147 - rheMac2.chr10 64554122 64554123 147 - +26326 hg18.chr22_insert 1 hg18.chr22 19177960 19177960 170 - panTro2.chr22 19172779 19172780 169 - rheMac2.chr10 64585330 64585331 177 - +26358 hg18.chr22_insert 4 hg18.chr22 19146062 19146065 151 - panTro2.chr22 19144339 19144340 147 - rheMac2.chr10 64554122 64554123 147 - +26447 hg18.chr22_insert 1 hg18.chr22 19177960 19177960 170 - panTro2.chr22 19172779 19172780 169 - rheMac2.chr10 64585330 64585331 177 - +26465 hg18.chr22_insert 1 hg18.chr22 19194205 19194205 133 + panTro2.chr22 19192140 19192141 132 + rheMac2.chr10 64606293 64606294 134 + +26521 hg18.chr22_insert 1 hg18.chr22 19204992 19204992 195 + panTro2.chr22 19202044 19202045 194 + rheMac2.chr10 64618666 64618667 193 + +26525 hg18.chr22_insert 7 hg18.chr22 19205394 19205400 186 + panTro2.chr22 19202445 19202446 179 + rheMac2.chr10 64619052 64619053 159 + +26526 hg18.chr22_insert 1 hg18.chr22 19205692 19205692 454 + panTro2.chr22 19202736 19202737 454 + rheMac2.chr10 64619655 64619656 448 + +26528 hg18.chr22_insert 5 hg18.chr22 19206245 19206249 329 + panTro2.chr22 19203277 19203278 324 + rheMac2.chr10 64620186 64620187 324 + +26687 hg18.chr22_insert 1 hg18.chr22 19240389 19240389 294 + panTro2.chr22 19238262 19238263 291 + rheMac2.chr10 64656539 64656540 299 + +26749 hg18.chr22_insert 1 hg18.chr22 19194205 19194205 133 + panTro2.chr22 19192140 19192141 132 + rheMac2.chr10 64606293 64606294 134 + +26805 hg18.chr22_insert 1 hg18.chr22 19204992 19204992 195 + panTro2.chr22 19202044 19202045 194 + rheMac2.chr10 64618666 64618667 193 + +26809 hg18.chr22_insert 7 hg18.chr22 19205394 19205400 186 + panTro2.chr22 19202445 19202446 179 + rheMac2.chr10 64619052 64619053 159 + +26810 hg18.chr22_insert 1 hg18.chr22 19205692 19205692 454 + panTro2.chr22 19202736 19202737 454 + rheMac2.chr10 64619655 64619656 448 + +26812 hg18.chr22_insert 5 hg18.chr22 19206245 19206249 329 + panTro2.chr22 19203277 19203278 324 + rheMac2.chr10 64620186 64620187 324 + +26971 hg18.chr22_insert 1 hg18.chr22 19240389 19240389 294 + panTro2.chr22 19238262 19238263 291 + rheMac2.chr10 64656539 64656540 299 + +27033 hg18.chr22_insert 1 hg18.chr22 19194205 19194205 133 + panTro2.chr22 19192140 19192141 132 + rheMac2.chr10 64606293 64606294 134 + +27089 hg18.chr22_insert 1 hg18.chr22 19204992 19204992 195 + panTro2.chr22 19202044 19202045 194 + rheMac2.chr10 64618666 64618667 193 + +27093 hg18.chr22_insert 7 hg18.chr22 19205394 19205400 186 + panTro2.chr22 19202445 19202446 179 + rheMac2.chr10 64619052 64619053 159 + +27094 hg18.chr22_insert 1 hg18.chr22 19205692 19205692 454 + panTro2.chr22 19202736 19202737 454 + rheMac2.chr10 64619655 64619656 448 + +27096 hg18.chr22_insert 5 hg18.chr22 19206245 19206249 329 + panTro2.chr22 19203277 19203278 324 + rheMac2.chr10 64620186 64620187 324 + +27255 hg18.chr22_insert 1 hg18.chr22 19240389 19240389 294 + panTro2.chr22 19238262 19238263 291 + rheMac2.chr10 64656539 64656540 299 + +27314 hg18.chr22_insert 1 hg18.chr22 19250238 19250238 587 + panTro2.chr22 19248080 19248081 586 + rheMac2.chr10 64667091 64667092 587 + +27416 hg18.chr22_insert 5 hg18.chr22 19270558 19270562 319 + panTro2.chr22 19268440 19268441 305 + rheMac2.chr10 64688596 64688597 286 + +27416 hg18.chr22_insert 9 hg18.chr22 19270572 19270580 319 + panTro2.chr22 19268449 19268450 305 + rheMac2.chr10 64688605 64688606 286 + +27430 hg18.chr22_insert 1 hg18.chr22 19194205 19194205 133 + panTro2.chr22 19192140 19192141 132 + rheMac2.chr10 64606293 64606294 134 + +27486 hg18.chr22_insert 1 hg18.chr22 19204992 19204992 195 + panTro2.chr22 19202044 19202045 194 + rheMac2.chr10 64618666 64618667 193 + +27490 hg18.chr22_insert 7 hg18.chr22 19205394 19205400 186 + panTro2.chr22 19202445 19202446 179 + rheMac2.chr10 64619052 64619053 159 + +27491 hg18.chr22_insert 1 hg18.chr22 19205692 19205692 454 + panTro2.chr22 19202736 19202737 454 + rheMac2.chr10 64619655 64619656 448 + +27493 hg18.chr22_insert 5 hg18.chr22 19206245 19206249 329 + panTro2.chr22 19203277 19203278 324 + rheMac2.chr10 64620186 64620187 324 + +27652 hg18.chr22_insert 1 hg18.chr22 19240389 19240389 294 + panTro2.chr22 19238262 19238263 291 + rheMac2.chr10 64656539 64656540 299 + +27711 hg18.chr22_insert 1 hg18.chr22 19250238 19250238 587 + panTro2.chr22 19248080 19248081 586 + rheMac2.chr10 64667091 64667092 587 + +27813 hg18.chr22_insert 5 hg18.chr22 19270558 19270562 319 + panTro2.chr22 19268440 19268441 305 + rheMac2.chr10 64688596 64688597 286 + +27813 hg18.chr22_insert 9 hg18.chr22 19270572 19270580 319 + panTro2.chr22 19268449 19268450 305 + rheMac2.chr10 64688605 64688606 286 + +27827 hg18.chr22_insert 1 hg18.chr22 19194205 19194205 133 + panTro2.chr22 19192140 19192141 132 + rheMac2.chr10 64606293 64606294 134 + +27883 hg18.chr22_insert 1 hg18.chr22 19204992 19204992 195 + panTro2.chr22 19202044 19202045 194 + rheMac2.chr10 64618666 64618667 193 + +27887 hg18.chr22_insert 7 hg18.chr22 19205394 19205400 186 + panTro2.chr22 19202445 19202446 179 + rheMac2.chr10 64619052 64619053 159 + +27888 hg18.chr22_insert 1 hg18.chr22 19205692 19205692 454 + panTro2.chr22 19202736 19202737 454 + rheMac2.chr10 64619655 64619656 448 + +27890 hg18.chr22_insert 5 hg18.chr22 19206245 19206249 329 + panTro2.chr22 19203277 19203278 324 + rheMac2.chr10 64620186 64620187 324 + +28049 hg18.chr22_insert 1 hg18.chr22 19240389 19240389 294 + panTro2.chr22 19238262 19238263 291 + rheMac2.chr10 64656539 64656540 299 + +28108 hg18.chr22_insert 1 hg18.chr22 19250238 19250238 587 + panTro2.chr22 19248080 19248081 586 + rheMac2.chr10 64667091 64667092 587 + +28210 hg18.chr22_insert 5 hg18.chr22 19270558 19270562 319 + panTro2.chr22 19268440 19268441 305 + rheMac2.chr10 64688596 64688597 286 + +28210 hg18.chr22_insert 9 hg18.chr22 19270572 19270580 319 + panTro2.chr22 19268449 19268450 305 + rheMac2.chr10 64688605 64688606 286 + +28224 hg18.chr22_insert 1 hg18.chr22 19194205 19194205 133 + panTro2.chr22 19192140 19192141 132 + rheMac2.chr10 64606293 64606294 134 + +28280 hg18.chr22_insert 1 hg18.chr22 19204992 19204992 195 + panTro2.chr22 19202044 19202045 194 + rheMac2.chr10 64618666 64618667 193 + +28284 hg18.chr22_insert 7 hg18.chr22 19205394 19205400 186 + panTro2.chr22 19202445 19202446 179 + rheMac2.chr10 64619052 64619053 159 + +28285 hg18.chr22_insert 1 hg18.chr22 19205692 19205692 454 + panTro2.chr22 19202736 19202737 454 + rheMac2.chr10 64619655 64619656 448 + +28287 hg18.chr22_insert 5 hg18.chr22 19206245 19206249 329 + panTro2.chr22 19203277 19203278 324 + rheMac2.chr10 64620186 64620187 324 + +28446 hg18.chr22_insert 1 hg18.chr22 19240389 19240389 294 + panTro2.chr22 19238262 19238263 291 + rheMac2.chr10 64656539 64656540 299 + +28505 hg18.chr22_insert 1 hg18.chr22 19250238 19250238 587 + panTro2.chr22 19248080 19248081 586 + rheMac2.chr10 64667091 64667092 587 + +28607 hg18.chr22_insert 5 hg18.chr22 19270558 19270562 319 + panTro2.chr22 19268440 19268441 305 + rheMac2.chr10 64688596 64688597 286 + +28607 hg18.chr22_insert 9 hg18.chr22 19270572 19270580 319 + panTro2.chr22 19268449 19268450 305 + rheMac2.chr10 64688605 64688606 286 + +28622 hg18.chr22_insert 1 hg18.chr22 19240389 19240389 294 + panTro2.chr22 19238262 19238263 291 + rheMac2.chr10 64656539 64656540 299 + +28681 hg18.chr22_insert 1 hg18.chr22 19250238 19250238 587 + panTro2.chr22 19248080 19248081 586 + rheMac2.chr10 64667091 64667092 587 + +28783 hg18.chr22_insert 5 hg18.chr22 19270558 19270562 319 + panTro2.chr22 19268440 19268441 305 + rheMac2.chr10 64688596 64688597 286 + +28783 hg18.chr22_insert 9 hg18.chr22 19270572 19270580 319 + panTro2.chr22 19268449 19268450 305 + rheMac2.chr10 64688605 64688606 286 + +28844 hg18.chr22_insert 5 hg18.chr22 19270558 19270562 319 + panTro2.chr22 19268440 19268441 305 + rheMac2.chr10 64688596 64688597 286 + +28844 hg18.chr22_insert 9 hg18.chr22 19270572 19270580 319 + panTro2.chr22 19268449 19268450 305 + rheMac2.chr10 64688605 64688606 286 + +28861 hg18.chr22_insert 5 hg18.chr22 19270558 19270562 319 + panTro2.chr22 19268440 19268441 305 + rheMac2.chr10 64688596 64688597 286 + +28861 hg18.chr22_insert 9 hg18.chr22 19270572 19270580 319 + panTro2.chr22 19268449 19268450 305 + rheMac2.chr10 64688605 64688606 286 + +28871 hg18.chr22_insert 1 hg18.chr22 19301184 19301184 192 - panTro2.chr22 19300507 19300508 190 - rheMac2.chr10 64711169 64711170 194 - +28872 hg18.chr22_insert 1 hg18.chr22 19301398 19301398 50 - panTro2.chr22 19300719 19300720 51 - rheMac2.chr10 64711386 64711387 54 - +28892 hg18.chr22_insert 2 hg18.chr22 19392955 19392956 331 - panTro2.chr22 19425493 19425494 329 - rheMac2.chr10 65208538 65208539 334 + +28936 hg18.chr22_insert 1 hg18.chr22 19402967 19402967 240 - panTro2.chr22 19435555 19435556 239 - rheMac2.chr10 65199473 65199474 239 + +28955 hg18.chr22_insert 2 hg18.chr22 19392955 19392956 331 - panTro2.chr22 19425493 19425494 329 - rheMac2.chr10 65208538 65208539 334 + +28999 hg18.chr22_insert 1 hg18.chr22 19402967 19402967 240 - panTro2.chr22 19435555 19435556 239 - rheMac2.chr10 65199473 65199474 239 + +29035 hg18.chr22_insert 4 hg18.chr22 19410155 19410158 280 - panTro2.chr22 19442969 19442970 279 - rheMac2.chr10 65191667 65191668 283 + +29037 hg18.chr22_insert 13 hg18.chr22 19410610 19410622 192 - panTro2.chr22 19443423 19443424 179 - rheMac2.chr10 65191469 65191470 200 + +29077 hg18.chr22_insert 1 hg18.chr22 19416740 19416740 924 - panTro2.chr22 19449466 19449467 953 - rheMac2.chr10 65184560 65184561 913 + +29096 hg18.chr22_insert 2 hg18.chr22 19392955 19392956 331 - panTro2.chr22 19425493 19425494 329 - rheMac2.chr10 65208538 65208539 334 + +29140 hg18.chr22_insert 1 hg18.chr22 19402967 19402967 240 - panTro2.chr22 19435555 19435556 239 - rheMac2.chr10 65199473 65199474 239 + +29176 hg18.chr22_insert 4 hg18.chr22 19410155 19410158 280 - panTro2.chr22 19442969 19442970 279 - rheMac2.chr10 65191667 65191668 283 + +29178 hg18.chr22_insert 13 hg18.chr22 19410610 19410622 192 - panTro2.chr22 19443423 19443424 179 - rheMac2.chr10 65191469 65191470 200 + +29218 hg18.chr22_insert 1 hg18.chr22 19416740 19416740 924 - panTro2.chr22 19449466 19449467 953 - rheMac2.chr10 65184560 65184561 913 + +29273 hg18.chr22_insert 1 hg18.chr22 19428489 19428489 295 - panTro2.chr22 19461184 19461185 294 - rheMac2.chr10 65172730 65172731 294 + +29278 hg18.chr22_insert 1 hg18.chr22 19429454 19429454 921 - panTro2.chr22 19462148 19462149 921 - rheMac2.chr10 65170715 65170716 925 + +29317 hg18.chr22_insert 1 hg18.chr22 19438692 19438692 266 - panTro2.chr22 19471446 19471447 265 - rheMac2.chr10 65160489 65160490 268 + +29428 hg18.chr22_insert 1 hg18.chr22 19460850 19460850 168 - panTro2.chr22 19493881 19493882 167 - rheMac2.chr10 65141152 65141153 166 + +29483 hg18.chr22_insert 1 hg18.chr22 19470504 19470504 212 - panTro2.chr22 19503762 19503763 211 - rheMac2.chr10 65130850 65130851 210 + +29548 hg18.chr22_insert 1 hg18.chr22 19483124 19483124 522 - panTro2.chr22 19517528 19517529 520 - rheMac2.chr10 65118109 65118110 527 + +29662 hg18.chr22_insert 2 hg18.chr22 19507703 19507704 282 - panTro2.chr22 19544036 19544037 280 - rheMac2.chr10 65091769 65091770 279 + +29696 hg18.chr22_insert 5 hg18.chr22 19520074 19520078 348 - panTro2.chr22 19556403 19556404 343 - rheMac2.chr10 65084907 65084908 336 + +29699 hg18.chr22_insert 2 hg18.chr22 19520918 19520919 604 - panTro2.chr22 19557242 19557243 602 - rheMac2.chr10 65084301 65084302 614 + +29723 hg18.chr22_insert 1 hg18.chr22 19524102 19524102 49 - panTro2.chr22 19560436 19560437 48 - rheMac2.chr10 65081066 65081067 69 + +29807 hg18.chr22_insert 4 hg18.chr22 19541898 19541901 269 - panTro2.chr22 19579129 19579130 265 - rheMac2.chr10 65063692 65063693 272 + +29830 hg18.chr22_insert 1 hg18.chr22 19460960 19460960 168 + panTro2.chr22 19493991 19493992 167 + rheMac2.chr10 65141263 65141264 166 - +29885 hg18.chr22_insert 1 hg18.chr22 19470650 19470650 212 + panTro2.chr22 19503908 19503909 211 + rheMac2.chr10 65130997 65130998 210 - +29928 hg18.chr22_insert 1 hg18.chr22 19470650 19470650 212 + panTro2.chr22 19503908 19503909 211 + rheMac2.chr10 65130997 65130998 210 - +29938 hg18.chr22_insert 1 hg18.chr22 19483124 19483124 522 - panTro2.chr22 19517528 19517529 520 - rheMac2.chr10 65118109 65118110 527 + +30052 hg18.chr22_insert 2 hg18.chr22 19507703 19507704 282 - panTro2.chr22 19544036 19544037 280 - rheMac2.chr10 65091769 65091770 279 + +30086 hg18.chr22_insert 5 hg18.chr22 19520074 19520078 348 - panTro2.chr22 19556403 19556404 343 - rheMac2.chr10 65084907 65084908 336 + +30089 hg18.chr22_insert 2 hg18.chr22 19520918 19520919 604 - panTro2.chr22 19557242 19557243 602 - rheMac2.chr10 65084301 65084302 614 + +30113 hg18.chr22_insert 1 hg18.chr22 19524102 19524102 49 - panTro2.chr22 19560436 19560437 48 - rheMac2.chr10 65081066 65081067 69 + +30197 hg18.chr22_insert 4 hg18.chr22 19541898 19541901 269 - panTro2.chr22 19579129 19579130 265 - rheMac2.chr10 65063692 65063693 272 + +30285 hg18.chr22_insert 1 hg18.chr22 19555413 19555413 242 + panTro2.chr22 19593050 19593051 241 + rheMac2.chr10 65048987 65048988 247 - +30301 hg18.chr22_insert 3 hg18.chr22 19557132 19557134 340 + panTro2.chr22 19595530 19595531 337 + rheMac2.chr10 65046787 65046788 333 - +30307 hg18.chr22_insert 27 hg18.chr22 19558528 19558554 142 + panTro2.chr22 19596914 19596915 115 + rheMac2.chr10 65045793 65045794 112 - +30397 hg18.chr22_insert 1 hg18.chr22 19573374 19573374 196 + panTro2.chr22 19622890 19622891 195 + rheMac2.chr10 65030629 65030630 196 - +30458 hg18.chr22_insert 1 hg18.chr22 19608844 19608844 74 + panTro2.chr22 19658881 19658882 73 + rheMac2.chr10 64986012 64986013 73 - +30485 hg18.chr22_insert 2 hg18.chr22 19614864 19614865 254 + panTro2.chr22 19666386 19666387 252 + rheMac2.chr10 64978744 64978745 249 - +30512 hg18.chr22_insert 5 hg18.chr22 19619093 19619097 302 + panTro2.chr22 19670615 19670616 296 + rheMac2.chr10 64969142 64969143 282 - +30553 hg18.chr22_insert 2 hg18.chr22 19623976 19623977 201 + panTro2.chr22 19675894 19675895 199 + rheMac2.chr10 64964910 64964911 194 - +30558 hg18.chr22_insert 1 hg18.chr22 19624885 19624885 52 + panTro2.chr22 19676804 19676805 51 + rheMac2.chr10 64963580 64963581 22 - +30578 hg18.chr22_insert 1 hg18.chr22 19631452 19631452 487 + panTro2.chr22 19683382 19683383 486 + rheMac2.chr10 64957307 64957308 467 - +30580 hg18.chr22_insert 2 hg18.chr22 19632337 19632338 184 + panTro2.chr22 19684291 19684292 182 + rheMac2.chr10 64956047 64956048 183 - +30585 hg18.chr22_insert 2 hg18.chr22 19633411 19633412 18 + panTro2.chr22 19685363 19685364 16 + rheMac2.chr10 64955089 64955090 10 - +30594 hg18.chr22_insert 1 hg18.chr22 19634951 19634951 84 + panTro2.chr22 19686900 19686901 83 + rheMac2.chr10 64953559 64953560 84 - +30600 hg18.chr22_insert 1 hg18.chr22 19636305 19636305 397 + panTro2.chr22 19688253 19688254 396 + rheMac2.chr10 64952407 64952408 394 - +30605 hg18.chr22_insert 6 hg18.chr22 19637712 19637717 291 + panTro2.chr22 19689663 19689664 285 + rheMac2.chr10 64950762 64950763 285 - +30661 hg18.chr22_insert 1 hg18.chr22 19608844 19608844 74 + panTro2.chr22 19658881 19658882 73 + rheMac2.chr10 64986012 64986013 73 - +30688 hg18.chr22_insert 2 hg18.chr22 19614864 19614865 254 + panTro2.chr22 19666386 19666387 252 + rheMac2.chr10 64978744 64978745 249 - +30715 hg18.chr22_insert 5 hg18.chr22 19619093 19619097 302 + panTro2.chr22 19670615 19670616 296 + rheMac2.chr10 64969142 64969143 282 - +30756 hg18.chr22_insert 2 hg18.chr22 19623976 19623977 201 + panTro2.chr22 19675894 19675895 199 + rheMac2.chr10 64964910 64964911 194 - +30761 hg18.chr22_insert 1 hg18.chr22 19624885 19624885 52 + panTro2.chr22 19676804 19676805 51 + rheMac2.chr10 64963580 64963581 22 - +30781 hg18.chr22_insert 1 hg18.chr22 19631452 19631452 487 + panTro2.chr22 19683382 19683383 486 + rheMac2.chr10 64957307 64957308 467 - +30783 hg18.chr22_insert 2 hg18.chr22 19632337 19632338 184 + panTro2.chr22 19684291 19684292 182 + rheMac2.chr10 64956047 64956048 183 - +30788 hg18.chr22_insert 2 hg18.chr22 19633411 19633412 18 + panTro2.chr22 19685363 19685364 16 + rheMac2.chr10 64955089 64955090 10 - +30797 hg18.chr22_insert 1 hg18.chr22 19634951 19634951 84 + panTro2.chr22 19686900 19686901 83 + rheMac2.chr10 64953559 64953560 84 - +30803 hg18.chr22_insert 1 hg18.chr22 19636305 19636305 397 + panTro2.chr22 19688253 19688254 396 + rheMac2.chr10 64952407 64952408 394 - +30808 hg18.chr22_insert 6 hg18.chr22 19637712 19637717 291 + panTro2.chr22 19689663 19689664 285 + rheMac2.chr10 64950762 64950763 285 - +30821 hg18.chr22_insert 4 hg18.chr22 19643414 19643417 556 + panTro2.chr22 19696628 19696629 553 + rheMac2.chr10 64944478 64944479 551 - +30833 hg18.chr22_insert 1 hg18.chr22 19646356 19646356 621 + panTro2.chr22 19699559 19699560 617 + rheMac2.chr10 64942730 64942731 585 - +30834 hg18.chr22_insert 1 hg18.chr22 19647051 19647051 655 + panTro2.chr22 19700250 19700251 654 + rheMac2.chr10 64942168 64942169 672 - +30853 hg18.chr22_insert 1 hg18.chr22 19650941 19650941 205 + panTro2.chr22 19704483 19704484 204 + rheMac2.chr10 64937336 64937337 206 - +30867 hg18.chr22_insert 1 hg18.chr22 19654274 19654274 60 + panTro2.chr22 19707800 19707801 59 + rheMac2.chr10 64934339 64934340 59 - +30890 hg18.chr22_insert 3 hg18.chr22 19659264 19659266 613 + panTro2.chr22 19712960 19712961 606 + rheMac2.chr10 64927707 64927708 600 - +30890 hg18.chr22_insert 4 hg18.chr22 19659749 19659752 613 + panTro2.chr22 19713442 19713443 606 + rheMac2.chr10 64928182 64928183 600 - +30920 hg18.chr22_insert 2 hg18.chr22 19665020 19665021 775 + panTro2.chr22 19718993 19718994 768 + rheMac2.chr10 64922072 64922073 774 - +30920 hg18.chr22_insert 1 hg18.chr22 19665127 19665127 775 + panTro2.chr22 19719098 19719099 768 + rheMac2.chr10 64922177 64922178 774 - +30928 hg18.chr22_insert 1 hg18.chr22 19650941 19650941 205 + panTro2.chr22 19704483 19704484 204 + rheMac2.chr10 64937336 64937337 206 - +30942 hg18.chr22_insert 1 hg18.chr22 19654274 19654274 60 + panTro2.chr22 19707800 19707801 59 + rheMac2.chr10 64934339 64934340 59 - +30965 hg18.chr22_insert 3 hg18.chr22 19659264 19659266 613 + panTro2.chr22 19712960 19712961 606 + rheMac2.chr10 64927707 64927708 600 - +30965 hg18.chr22_insert 4 hg18.chr22 19659749 19659752 613 + panTro2.chr22 19713442 19713443 606 + rheMac2.chr10 64928182 64928183 600 - +30995 hg18.chr22_insert 2 hg18.chr22 19665020 19665021 775 + panTro2.chr22 19718993 19718994 768 + rheMac2.chr10 64922072 64922073 774 - +30995 hg18.chr22_insert 1 hg18.chr22 19665127 19665127 775 + panTro2.chr22 19719098 19719099 768 + rheMac2.chr10 64922177 64922178 774 - +31008 hg18.chr22_insert 1 hg18.chr22 19654274 19654274 60 + panTro2.chr22 19707800 19707801 59 + rheMac2.chr10 64934339 64934340 59 - +31031 hg18.chr22_insert 3 hg18.chr22 19659264 19659266 613 + panTro2.chr22 19712960 19712961 606 + rheMac2.chr10 64927707 64927708 600 - +31031 hg18.chr22_insert 4 hg18.chr22 19659749 19659752 613 + panTro2.chr22 19713442 19713443 606 + rheMac2.chr10 64928182 64928183 600 - +31061 hg18.chr22_insert 2 hg18.chr22 19665020 19665021 775 + panTro2.chr22 19718993 19718994 768 + rheMac2.chr10 64922072 64922073 774 - +31061 hg18.chr22_insert 1 hg18.chr22 19665127 19665127 775 + panTro2.chr22 19719098 19719099 768 + rheMac2.chr10 64922177 64922178 774 - +31063 hg18.chr22_insert 3 hg18.chr22 19659264 19659266 613 + panTro2.chr22 19712960 19712961 606 + rheMac2.chr10 64927707 64927708 600 - +31063 hg18.chr22_insert 4 hg18.chr22 19659749 19659752 613 + panTro2.chr22 19713442 19713443 606 + rheMac2.chr10 64928182 64928183 600 - +31093 hg18.chr22_insert 2 hg18.chr22 19665020 19665021 775 + panTro2.chr22 19718993 19718994 768 + rheMac2.chr10 64922072 64922073 774 - +31093 hg18.chr22_insert 1 hg18.chr22 19665127 19665127 775 + panTro2.chr22 19719098 19719099 768 + rheMac2.chr10 64922177 64922178 774 - +31101 hg18.chr22_insert 2 hg18.chr22 19665020 19665021 801 + panTro2.chr22 19718993 19718994 794 + rheMac2.chr10 64922046 64922047 800 - +31101 hg18.chr22_insert 1 hg18.chr22 19665127 19665127 801 + panTro2.chr22 19719098 19719099 794 + rheMac2.chr10 64922151 64922152 800 - +31122 hg18.chr22_insert 2 hg18.chr22 19668901 19668902 70 + panTro2.chr22 19722869 19722870 68 + rheMac2.chr10 64918355 64918356 68 - +31124 hg18.chr22_insert 4 hg18.chr22 19669045 19669048 68 + panTro2.chr22 19723011 19723012 64 + rheMac2.chr10 64918277 64918278 54 - +31139 hg18.chr22_insert 4 hg18.chr22 19670793 19670796 302 + panTro2.chr22 19724776 19724777 298 + rheMac2.chr10 64916172 64916173 271 - +31209 hg18.chr22_insert 2 hg18.chr22 19668901 19668902 70 + panTro2.chr22 19722869 19722870 68 + rheMac2.chr10 64918355 64918356 68 - +31211 hg18.chr22_insert 4 hg18.chr22 19669045 19669048 68 + panTro2.chr22 19723011 19723012 64 + rheMac2.chr10 64918277 64918278 54 - +31226 hg18.chr22_insert 4 hg18.chr22 19670793 19670796 302 + panTro2.chr22 19724776 19724777 298 + rheMac2.chr10 64916172 64916173 271 - +31363 hg18.chr22_insert 1 hg18.chr22 19687630 19687630 201 + panTro2.chr22 19741771 19741772 203 + rheMac2.chr10 64898134 64898135 180 - +31412 hg18.chr22_insert 1 hg18.chr22 19687630 19687630 201 + panTro2.chr22 19741771 19741772 203 + rheMac2.chr10 64898134 64898135 180 - +31477 hg18.chr22_insert 1 hg18.chr22 19697159 19697159 822 - panTro2.chr22 19751749 19751750 821 - rheMac2.chr10 64846172 64846173 820 - +31515 hg18.chr22_insert 1 hg18.chr22 19697159 19697159 822 - panTro2.chr22 19751749 19751750 821 - rheMac2.chr10 64846172 64846173 820 - +31553 hg18.chr22_insert 1 hg18.chr22 19697159 19697159 822 - panTro2.chr22 19751749 19751750 821 - rheMac2.chr10 64846172 64846173 820 - +31577 hg18.chr22_insert 1 hg18.chr22 19701007 19701007 172 + panTro2.chr22 19755620 19755621 151 + rheMac2.chr10 64850007 64850008 156 + +31621 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19708435 19708438 329 + panTro2.chr22 19763041 19763042 331 + rheMac2.chr10 64873257 64873258 328 - +31957 hg18.chr22_insert 1 hg18.chr22 19742827 19742827 206 + panTro2.chr22 19798834 19798835 206 + rheMac2.chr10 64835011 64835012 210 - +31979 hg18.chr22_insert 3 hg18.chr22 19746678 19746680 133 + panTro2.chr22 19802700 19802701 130 + rheMac2.chr10 64831078 64831079 129 - +31990 hg18.chr22_insert 3 hg18.chr22 19747980 19747982 143 + panTro2.chr22 19805355 19805356 147 + rheMac2.chr10 64889320 64889321 147 + +32051 hg18.chr22_insert 1 hg18.chr22 19742827 19742827 206 + panTro2.chr22 19798834 19798835 206 + rheMac2.chr10 64835011 64835012 210 - +32073 hg18.chr22_insert 3 hg18.chr22 19746678 19746680 133 + panTro2.chr22 19802700 19802701 130 + rheMac2.chr10 64831078 64831079 129 - +32084 hg18.chr22_insert 3 hg18.chr22 19747980 19747982 143 + panTro2.chr22 19805355 19805356 147 + rheMac2.chr10 64889320 64889321 147 + +32116 hg18.chr22_insert 2 hg18.chr22 19802849 19802850 2291 + panTro2.chr22 19848438 19848439 2289 + rheMac2.chr10 64469996 64469997 2294 - +32122 hg18.chr22_insert 2 hg18.chr22 19802333 19802334 2291 - panTro2.chr22 19847922 19847923 2289 - rheMac2.chr10 64469493 64469494 2294 + +32195 hg18.chr22_insert 3 hg18.chr22 19904878 19904880 47 - panTro2.chr22_random 443969 443970 44 - rheMac2.chr10 68028537 68028538 38 + +32215 hg18.chr22_insert 1 hg18.chr22 19913667 19913667 743 - panTro2.chr22_random 453112 453113 742 - rheMac2.chr1 119588971 119588972 743 - +32231 hg18.chr22_insert 1 hg18.chr22 19917579 19917579 77 - panTro2.chr22_random 457019 457020 76 - rheMac2.chr1 119592638 119592639 76 - +32246 hg18.chr22_insert 2 hg18.chr22 19920840 19920841 1074 - panTro2.chr22_random 460295 460296 1077 - rheMac2.chr1 119595783 119595784 1113 - +32259 hg18.chr22_insert 1 hg18.chr22 19987360 19987360 857 - panTro2.chr22 19860984 19860985 847 - rheMac2.chr10 67571688 67571689 845 + +32261 hg18.chr22_insert 27 hg18.chr22 19988992 19989018 3371 - panTro2.chr22 19862616 19862617 3343 - rheMac2.chr10 67567143 67567144 3247 + +32261 hg18.chr22_insert 1 hg18.chr22 19990864 19990864 3371 - panTro2.chr22 19864461 19864462 3343 - rheMac2.chr10 67568908 67568909 3247 + +32268 hg18.chr22_insert 6 hg18.chr22 20101892 20101897 110 + panTro2.chr22 20003317 20003318 104 + rheMac2.chr10 65271728 65271729 103 - +32271 hg18.chr22_insert 10 hg18.chr22 20102633 20102642 1975 + panTro2.chr22 20004609 20004610 1964 + rheMac2.chr10 65269823 65269824 1972 - +32271 hg18.chr22_insert 1 hg18.chr22 20104189 20104189 1975 + panTro2.chr22 20006155 20006156 1964 + rheMac2.chr10 65271370 65271371 1972 - +32277 hg18.chr22_insert 1 hg18.chr22 20106372 20106372 1660 + panTro2.chr22 20008335 20008336 1657 + rheMac2.chr10 65266592 65266593 1654 - +32277 hg18.chr22_insert 2 hg18.chr22 20107298 20107299 1660 + panTro2.chr22 20009260 20009261 1657 + rheMac2.chr10 65267514 65267515 1654 - +32324 hg18.chr22_insert 1 hg18.chr22 20116722 20116722 47 + panTro2.chr22 20018938 20018939 46 + rheMac2.chr10 65255929 65255930 46 - +32330 hg18.chr22_insert 1 hg18.chr22 20117775 20117775 257 + panTro2.chr22 20019985 20019986 264 + rheMac2.chr10 65254951 65254952 266 - +32377 hg18.chr22_insert 1 hg18.chr22 20124346 20124346 166 + panTro2.chr22 20026555 20026556 169 + rheMac2.chr10 65247621 65247622 168 - +32379 hg18.chr22_insert 1 hg18.chr22 20124686 20124686 1259 + panTro2.chr22 20026898 20026899 1256 + rheMac2.chr10 65246190 65246191 1258 - +32382 hg18.chr22_insert 1 hg18.chr22 20126110 20126110 370 + panTro2.chr22 20028319 20028320 382 + rheMac2.chr10 65245613 65245614 369 - +32403 hg18.chr22_insert 1 hg18.chr22 20132679 20132679 196 + panTro2.chr22 20034914 20034915 195 + rheMac2.chr10 65239339 65239340 199 - +32432 hg18.chr22_insert 1 hg18.chr22 20132679 20132679 196 + panTro2.chr22 20034914 20034915 195 + rheMac2.chr10 65239339 65239340 199 - +32494 hg18.chr22_insert 1 hg18.chr22 20170127 20170127 802 - panTro2.chr22_random 515921 515922 799 - rheMac2.chr10 65185998 65185999 844 + +32549 hg18.chr22_insert 1 hg18.chr22 20170127 20170127 802 - panTro2.chr22_random 515921 515922 799 - rheMac2.chr10 65185998 65185999 844 + +32571 hg18.chr22_insert 3 hg18.chr22 20176227 20176229 453 - panTro2.chr22_random 522128 522129 450 - rheMac2.chr10 65244778 65244779 450 - +32574 hg18.chr22_insert 1 hg18.chr22 20177554 20177554 261 - panTro2.chr22 20028315 20028316 260 + rheMac2.chr10 65246096 65246097 260 - +32575 hg18.chr22_insert 1 hg18.chr22 20177663 20177663 1269 - panTro2.chr22 20026897 20026898 1266 + rheMac2.chr10 65246199 65246200 1268 - +32577 hg18.chr22_insert 1 hg18.chr22 20179076 20179076 152 - panTro2.chr22 20026552 20026553 151 + rheMac2.chr10 65247600 65247601 152 - +32613 hg18.chr22_insert 1 hg18.chr22 20185816 20185816 236 - panTro2.chr22 20019985 20019986 235 + rheMac2.chr10 65254980 65254981 237 - +32618 hg18.chr22_insert 1 hg18.chr22 20186492 20186492 323 - panTro2.chr22 20018938 20018939 321 + rheMac2.chr10 65255658 65255659 317 - +32663 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20195994 1356 - panTro2.chr22 20008335 20008336 1353 + rheMac2.chr10 65266076 65266077 1352 - +33001 hg18.chr22_insert 2 hg18.chr22 20196929 20196930 1356 - panTro2.chr22 20009269 20009270 1353 + rheMac2.chr10 65266998 65266999 1352 - +33009 hg18.chr22_insert 1 hg18.chr22 20200734 20200734 1523 - panTro2.chr22 20006152 20006153 1522 + rheMac2.chr10 65270939 65270940 1522 - +33012 hg18.chr22_insert 6 hg18.chr22 20201528 20201533 117 - panTro2.chr22 20003317 20003318 111 + rheMac2.chr10 65271735 65271736 110 - +33096 hg18.chr22_insert 1 hg18.chr22 20263472 20263472 309 + panTro2.chr22 20171397 20171398 290 + rheMac2.chr10 65335731 65335732 290 + +33105 hg18.chr22_insert 3 hg18.chr22 20264741 20264743 790 + panTro2.chr22 20172665 20172666 790 + rheMac2.chr10 65336983 65336984 759 + +33124 hg18.chr22_insert 4 hg18.chr22 20270696 20270699 576 + panTro2.chr22 20178884 20178885 576 + rheMac2.chr10 65343330 65343331 560 + +33191 hg18.chr22_insert 1 hg18.chr22 20284185 20284185 60 + 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501 - rheMac2.chr10 65604229 65604230 502 - +35040 hg18.chr22_insert 6 hg18.chr22 20531076 20531081 276 - panTro2.chr22 20444705 20444706 270 - rheMac2.chr10 65606094 65606095 238 - +35044 hg18.chr22_insert 78 hg18.chr22 20533393 20533470 314 - panTro2.chr22 20447164 20447165 234 - rheMac2.chr10 65608380 65608381 240 - +35048 hg18.chr22_insert 1 hg18.chr22 20534118 20534118 120 - panTro2.chr22 20447808 20447809 119 - rheMac2.chr10 65609031 65609032 119 - +35061 hg18.chr22_insert 1 hg18.chr22 20540582 20540582 369 - panTro2.chr22 20454277 20454278 368 - rheMac2.chr10 65612651 65612652 362 - +35093 hg18.chr22_insert 3 hg18.chr22 20546393 20546395 391 - panTro2.chr22 20460101 20460102 388 - rheMac2.chr10 65619343 65619344 387 - +35191 hg18.chr22_insert 8 hg18.chr22 20462620 20462627 62 - panTro2.chr22 20373163 20373164 51 - rheMac2.chr10 65535720 65535721 51 - +35216 hg18.chr22_insert 2 hg18.chr22 20466585 20466586 114 - panTro2.chr22 20377460 20377461 112 - rheMac2.chr10 65539721 65539722 112 - +35223 hg18.chr22_insert 4 hg18.chr22 20468550 20468553 435 - panTro2.chr22 20379449 20379450 431 - rheMac2.chr10 65542167 65542168 429 - +35224 hg18.chr22_insert 6 hg18.chr22 20469077 20469082 145 - panTro2.chr22 20379976 20379977 143 - rheMac2.chr10 65542694 65542695 126 - +35261 hg18.chr22_insert 3 hg18.chr22 20474751 20474753 83 - panTro2.chr22 20385692 20385693 80 - rheMac2.chr10 65548456 65548457 80 - +35327 hg18.chr22_insert 1 hg18.chr22 20489706 20489706 132 - panTro2.chr22 20400543 20400544 131 - rheMac2.chr10 65562459 65562460 131 - +35369 hg18.chr22_insert 22 hg18.chr22 20494854 20494875 221 - panTro2.chr22 20405705 20405706 199 - rheMac2.chr10 65567909 65567910 198 - +35433 hg18.chr22_insert 1 hg18.chr22 20506439 20506439 305 - panTro2.chr22 20417488 20417489 303 - rheMac2.chr10 65579870 65579871 291 - +35433 hg18.chr22_insert 1 hg18.chr22 20506697 20506697 305 - panTro2.chr22 20417745 20417746 303 - rheMac2.chr10 65580127 65580128 291 - +35496 hg18.chr22_insert 3 hg18.chr22 20515136 20515138 156 - panTro2.chr22 20426475 20426476 153 - rheMac2.chr10 65590174 65590175 153 - +35538 hg18.chr22_insert 1 hg18.chr22 20520744 20520744 333 - panTro2.chr22 20432718 20432719 332 - rheMac2.chr10 65595779 65595780 332 - +35552 hg18.chr22_insert 1 hg18.chr22 20522625 20522625 326 - panTro2.chr22 20434594 20434595 324 - rheMac2.chr10 65597641 65597642 332 - +35577 hg18.chr22_insert 2 hg18.chr22 20528917 20528918 503 - panTro2.chr22 20441245 20441246 501 - rheMac2.chr10 65604229 65604230 502 - +35588 hg18.chr22_insert 6 hg18.chr22 20531076 20531081 276 - panTro2.chr22 20444705 20444706 270 - rheMac2.chr10 65606094 65606095 238 - +35592 hg18.chr22_insert 78 hg18.chr22 20533393 20533470 314 - panTro2.chr22 20447164 20447165 234 - rheMac2.chr10 65608380 65608381 240 - +35596 hg18.chr22_insert 1 hg18.chr22 20534118 20534118 120 - panTro2.chr22 20447808 20447809 119 - rheMac2.chr10 65609031 65609032 119 - +35609 hg18.chr22_insert 1 hg18.chr22 20540582 20540582 369 - panTro2.chr22 20454277 20454278 368 - rheMac2.chr10 65612651 65612652 362 - +35641 hg18.chr22_insert 3 hg18.chr22 20546393 20546395 391 - panTro2.chr22 20460101 20460102 388 - rheMac2.chr10 65619343 65619344 387 - +35737 hg18.chr22_insert 8 hg18.chr22 20462620 20462627 62 - panTro2.chr22 20373163 20373164 51 - rheMac2.chr10 65535720 65535721 51 - +35762 hg18.chr22_insert 2 hg18.chr22 20466585 20466586 114 - panTro2.chr22 20377460 20377461 112 - rheMac2.chr10 65539721 65539722 112 - +35769 hg18.chr22_insert 4 hg18.chr22 20468550 20468553 435 - panTro2.chr22 20379449 20379450 431 - rheMac2.chr10 65542167 65542168 429 - +35770 hg18.chr22_insert 6 hg18.chr22 20469077 20469082 145 - panTro2.chr22 20379976 20379977 143 - rheMac2.chr10 65542694 65542695 126 - +35807 hg18.chr22_insert 3 hg18.chr22 20474751 20474753 83 - panTro2.chr22 20385692 20385693 80 - rheMac2.chr10 65548456 65548457 80 - +35873 hg18.chr22_insert 1 hg18.chr22 20489706 20489706 132 - panTro2.chr22 20400543 20400544 131 - rheMac2.chr10 65562459 65562460 131 - diff -r 000000000000 -r f16000dc644b test-data/non_overlapping_indels1.tabular --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/non_overlapping_indels1.tabular Wed Sep 25 10:24:36 2013 -0400 @@ -0,0 +1,385 @@ +3 hg18.chr22_insert 3 hg18.chr22 14508610 14508612 3924 - panTro2.chr2b 132518950 132518951 3910 + rheMac2.chr17 14311798 14311799 3896 + +7 hg18.chr22_insert 13 hg18.chr22 14513678 14513690 348 - panTro2.chr2b 132517876 132517877 321 + rheMac2.chr17 14274462 14274463 337 + +7 hg18.chr22_insert 6 hg18.chr22 14513694 14513699 348 - panTro2.chr2b 132517879 132517880 321 + rheMac2.chr17 14274465 14274466 337 + +59 hg18.chr22_insert 9 hg18.chr22 14529501 14529509 385 - panTro2.chr22 14528775 14528776 376 - rheMac2.chr9 42869449 42869450 375 - +70 hg18.chr22_insert 4 hg18.chr22 14566316 14566319 540 - panTro2.chr2b 132492077 132492078 533 + rheMac2.chr10 59230438 59230439 533 - +78 hg18.chr22_insert 7 hg18.chr22 14568610 14568616 2337 - panTro2.chr2b 132487750 132487751 2313 + rheMac2.chr10 59128305 59128306 2332 + +79 hg18.chr22_insert 4 hg18.chr22 14571556 14571559 2483 - panTro2.chr2b 132485878 132485879 2481 + rheMac2.chr10 59126094 59126095 2508 + +182 hg18.chr22_insert 4 hg18.chr22 15463934 15463937 1312 + panTro2.chr22 15489863 15489864 1316 + rheMac2.chr3 189373988 189373989 1293 - +182 hg18.chr22_insert 1 hg18.chr22 15464673 15464673 1312 + panTro2.chr22 15490601 15490602 1316 + rheMac2.chr3 189374723 189374724 1293 - +183 hg18.chr22_insert 3 hg18.chr22 15465019 15465021 383 + panTro2.chr22 15490952 15490953 380 + rheMac2.chr3 189373378 189373379 383 - +208 hg18.chr22_insert 1 hg18.chr22 15516316 15516316 3051 + panTro2.chr22 15542224 15542225 3032 + rheMac2.chr17 4991673 4991674 3045 - +229 hg18.chr22_insert 1 hg18.chr22 15496632 15496632 1729 + panTro2.chr22 15522543 15522544 1743 + rheMac2.chr17 1913545 1913546 1713 + +236 hg18.chr22_insert 1 hg18.chr22 15501698 15501698 1109 + 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62050457 60 + +1946 hg18.chr22_insert 1 hg18.chr22 16239191 16239191 249 + panTro2.chr22 16266680 16266681 248 + rheMac2.chr10 62050702 62050703 247 + +1953 hg18.chr22_insert 1 hg18.chr22 16239856 16239856 76 + panTro2.chr22 16267344 16267345 75 + rheMac2.chr10 62051376 62051377 75 + +1973 hg18.chr22_insert 1 hg18.chr22 16243103 16243103 769 + panTro2.chr22 16270600 16270601 770 + rheMac2.chr10 62054914 62054915 766 + +1977 hg18.chr22_insert 4 hg18.chr22 16246897 16246900 162 + panTro2.chr22 16274440 16274441 158 + rheMac2.chr10 62058983 62058984 162 + +1995 hg18.chr22_insert 1 hg18.chr22 16250623 16250623 272 + panTro2.chr22 16278157 16278158 270 + rheMac2.chr10 62062783 62062784 273 + +2011 hg18.chr22_insert 2 hg18.chr22 16254744 16254745 767 + panTro2.chr22 16282242 16282243 772 + rheMac2.chr10 62067168 62067169 873 + +2049 hg18.chr22_insert 3 hg18.chr22 16261798 16261800 452 + panTro2.chr22 16292627 16292628 441 + rheMac2.chr10 62077669 62077670 429 + +2059 hg18.chr22_insert 1 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panTro2.chr22 16320091 16320092 102 + rheMac2.chr10 62104666 62104667 93 + +2240 hg18.chr22_insert 1 hg18.chr22 16301557 16301557 105 + panTro2.chr22 16332942 16332943 104 + rheMac2.chr10 62117151 62117152 95 + +2248 hg18.chr22_insert 1 hg18.chr22 16302292 16302292 150 + panTro2.chr22 16333676 16333677 149 + rheMac2.chr10 62117937 62117938 148 + +2300 hg18.chr22_insert 1 hg18.chr22 16313421 16313421 526 + panTro2.chr22 16345948 16345949 528 + rheMac2.chr10 62130134 62130135 529 + +2339 hg18.chr22_insert 1 hg18.chr22 16330005 16330005 236 + panTro2.chr22 16364635 16364636 235 + rheMac2.chr10 62152453 62152454 231 + +2355 hg18.chr22_insert 1 hg18.chr22 16333101 16333101 160 + panTro2.chr22 16367723 16367724 159 + rheMac2.chr10 62155848 62155849 162 + +2366 hg18.chr22_insert 2 hg18.chr22 16335592 16335593 251 + panTro2.chr22 16370214 16370215 249 + rheMac2.chr10 62158376 62158377 248 + +3090 hg18.chr22_insert 5 hg18.chr22 16337393 16337397 57 + panTro2.chr22 16372008 16372009 52 + rheMac2.chr10 62161946 62161947 32 + +3116 hg18.chr22_insert 1 hg18.chr22 16343984 16343984 394 + panTro2.chr22 16381330 16381331 393 + rheMac2.chr10 62168327 62168328 393 + +3163 hg18.chr22_insert 3 hg18.chr22 16353304 16353306 123 + panTro2.chr22 16390677 16390678 120 + rheMac2.chr10 62178374 62178375 120 + +3326 hg18.chr22_insert 1 hg18.chr22 16390898 16390898 1020 + panTro2.chr22 16428794 16428795 1019 + rheMac2.chr10 62216152 62216153 1032 + +3330 hg18.chr22_insert 2 hg18.chr22 16395386 16395387 286 + panTro2.chr22 16434150 16434151 283 + rheMac2.chr10 62222097 62222098 286 + +3443 hg18.chr22_insert 4 hg18.chr22 16359446 16359449 185 + panTro2.chr22 16396823 16396824 181 + rheMac2.chr10 62183840 62183841 182 + +3477 hg18.chr22_insert 4 hg18.chr22 16364566 16364569 280 + panTro2.chr22 16401936 16401937 276 + rheMac2.chr10 62188910 62188911 247 + +3493 hg18.chr22_insert 1 hg18.chr22 16372864 16372864 256 + panTro2.chr22 16410224 16410225 255 + rheMac2.chr10 62197530 62197531 253 + 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16488955 16488955 285 - panTro2.chr22 16528496 16528497 287 - rheMac2.chr10 62322524 62322525 274 - +4334 hg18.chr22_insert 2 hg18.chr22 16492040 16492041 270 + panTro2.chr22 16531556 16531557 267 + rheMac2.chr10 62326300 62326301 274 + +4343 hg18.chr22_insert 34 hg18.chr22 16494412 16494445 1674 + panTro2.chr22 16534420 16534421 1643 + rheMac2.chr10 62328251 62328252 1585 + +6511 hg18.chr22_insert 22 hg18.chr22 16509729 16509750 192 + panTro2.chr22 16550830 16550831 170 + rheMac2.chr10 62343886 62343887 165 + +6529 hg18.chr22_insert 1 hg18.chr22 16513207 16513207 94 + panTro2.chr22 16554581 16554582 93 + rheMac2.chr10 62348379 62348380 93 + +6976 hg18.chr22_insert 1 hg18.chr22 16531090 16531090 2276 + panTro2.chr22 16572803 16572804 2271 + rheMac2.chr10 62366276 62366277 2277 + +7001 hg18.chr22_insert 1 hg18.chr22 16536560 16536560 61 + panTro2.chr22 16578271 16578272 60 + rheMac2.chr10 62371723 62371724 60 + +7021 hg18.chr22_insert 1 hg18.chr22 16539071 16539071 305 + panTro2.chr22 16580801 16580802 304 + rheMac2.chr10 62375628 62375629 305 + +7051 hg18.chr22_insert 1 hg18.chr22 16549703 16549703 283 + panTro2.chr22 16591410 16591411 287 + rheMac2.chr10 62385562 62385563 284 + +7377 hg18.chr22_insert 2 hg18.chr22 16557303 16557304 56 + panTro2.chr22 16599231 16599232 52 + rheMac2.chr10 62394189 62394190 55 + +7377 hg18.chr22_insert 2 hg18.chr22 16557308 16557309 56 + panTro2.chr22 16599234 16599235 52 + rheMac2.chr10 62394192 62394193 55 + +7429 hg18.chr22_insert 2 hg18.chr22 16564204 16564205 102 + panTro2.chr22 16606654 16606655 100 + rheMac2.chr10 62400892 62400893 95 + +7451 hg18.chr22_insert 2 hg18.chr22 16568693 16568694 309 + panTro2.chr22 16612218 16612219 307 + rheMac2.chr10 62406519 62406520 307 + +7596 hg18.chr22_insert 1 hg18.chr22 16569950 16569950 225 + panTro2.chr22 16613474 16613475 201 + rheMac2.chr10 62407773 62407774 225 + +7667 hg18.chr22_insert 1 hg18.chr22 16580120 16580120 210 + panTro2.chr22 16624680 16624681 238 + rheMac2.chr10 62417768 62417769 219 + +7754 hg18.chr22_insert 1 hg18.chr22 16597801 16597801 192 + panTro2.chr22 16649689 16649690 191 + rheMac2.chr10 62433733 62433734 192 + +8921 hg18.chr22_insert 1 hg18.chr22 16597865 16597865 192 - panTro2.chr22 16649753 16649754 191 - rheMac2.chr10 62433796 62433797 192 - +8960 hg18.chr22_insert 1 hg18.chr22 16604355 16604355 305 - panTro2.chr22 16656238 16656239 307 - rheMac2.chr10 62441180 62441181 304 - +9005 hg18.chr22_insert 3 hg18.chr22 16611256 16611258 541 - panTro2.chr22 16663491 16663492 539 - rheMac2.chr10 62448536 62448537 558 - +9040 hg18.chr22_insert 1 hg18.chr22 16620637 16620637 832 - panTro2.chr22 16672497 16672498 831 - rheMac2.chr10 62457950 62457951 820 - +9043 hg18.chr22_insert 1 hg18.chr22 16622311 16622311 632 - panTro2.chr22 16674170 16674171 629 - rheMac2.chr10 62459604 62459605 605 - +9058 hg18.chr22_insert 2 hg18.chr22 16624394 16624395 210 - panTro2.chr22 16676247 16676248 208 - rheMac2.chr10 62461666 62461667 178 - +9236 hg18.chr22_insert 1 hg18.chr22 16654251 16654251 263 - panTro2.chr22 16707134 16707135 262 - rheMac2.chr10 62489006 62489007 259 - +9237 hg18.chr22_insert 1 hg18.chr22 16654518 16654518 122 - panTro2.chr22 16707400 16707401 121 - rheMac2.chr10 62489270 62489271 119 - +9295 hg18.chr22_insert 2 hg18.chr22 16667852 16667853 613 - panTro2.chr22 16720095 16720096 610 - rheMac2.chr10 62502509 62502510 611 - +9395 hg18.chr22_insert 1 hg18.chr22 16689376 16689376 480 - panTro2.chr22 16743930 16743931 481 - rheMac2.chr10 62524203 62524204 464 - +9443 hg18.chr22_insert 1 hg18.chr22 16701423 16701423 375 - panTro2.chr22 16756196 16756197 377 - rheMac2.chr10 62535726 62535727 371 - +10223 hg18.chr22_insert 3 hg18.chr22 16866498 16866500 80 - panTro2.chr22 16926111 16926112 77 - rheMac2.chr10 62697707 62697708 71 - +10271 hg18.chr22_insert 5 hg18.chr22 16873608 16873612 199 - panTro2.chr22 16933248 16933249 194 - rheMac2.chr10 62704115 62704116 197 - +10285 hg18.chr22_insert 1 hg18.chr22 16876124 16876124 45 - panTro2.chr22 16935758 16935759 44 - rheMac2.chr10 62706900 62706901 45 - +10321 hg18.chr22_insert 2 hg18.chr22 16881541 16881542 48 - panTro2.chr22 16941220 16941221 42 - rheMac2.chr10 62712038 62712039 42 - +10341 hg18.chr22_insert 3 hg18.chr22 16885166 16885168 49 - panTro2.chr22 16944834 16944835 48 - rheMac2.chr10 62715603 62715604 52 - +10976 hg18.chr22_insert 3 hg18.chr22 16707877 16707879 283 - panTro2.chr22 16762351 16762352 280 - rheMac2.chr10 62542121 62542122 271 - +11026 hg18.chr22_insert 1 hg18.chr22 16717274 16717274 671 - panTro2.chr22 16771251 16771252 670 - rheMac2.chr10 62551638 62551639 701 - +11337 hg18.chr22_insert 2 hg18.chr22 16785163 16785164 138 - panTro2.chr22 16840642 16840643 136 - rheMac2.chr10 62618715 62618716 131 - +11344 hg18.chr22_insert 1 hg18.chr22 16785860 16785860 207 - panTro2.chr22 16841337 16841338 206 - rheMac2.chr10 62619362 62619363 206 - +11386 hg18.chr22_insert 1 hg18.chr22 16793011 16793011 689 - panTro2.chr22 16850593 16850594 687 - rheMac2.chr10 62627911 62627912 687 - +11418 hg18.chr22_insert 1 hg18.chr22 16804948 16804948 997 - panTro2.chr22 16862511 16862512 996 - rheMac2.chr10 62640039 62640040 994 - +11455 hg18.chr22_insert 1 hg18.chr22 16811670 16811670 206 - panTro2.chr22 16870400 16870401 207 - rheMac2.chr10 62646764 62646765 198 - +11512 hg18.chr22_insert 1 hg18.chr22 16821624 16821624 228 - panTro2.chr22 16880714 16880715 227 - rheMac2.chr10 62656715 62656716 261 - +11550 hg18.chr22_insert 15 hg18.chr22 16828362 16828376 403 - panTro2.chr22 16887448 16887449 388 - rheMac2.chr10 62663958 62663959 390 - +11555 hg18.chr22_insert 2 hg18.chr22 16829950 16829951 296 - panTro2.chr22 16889022 16889023 294 - rheMac2.chr10 62666010 62666011 294 - +11556 hg18.chr22_insert 1 hg18.chr22 16830118 16830118 185 - panTro2.chr22 16889188 16889189 184 - rheMac2.chr10 62666176 62666177 184 - +11557 hg18.chr22_insert 22 hg18.chr22 16830253 16830274 86 - panTro2.chr22 16889322 16889323 64 - rheMac2.chr10 62666310 62666311 61 - +11621 hg18.chr22_insert 1 hg18.chr22 16848057 16848057 229 - panTro2.chr22 16907170 16907171 228 - rheMac2.chr10 62678254 62678255 231 - +11653 hg18.chr22_insert 1 hg18.chr22 16852921 16852921 53 - panTro2.chr22 16912296 16912297 52 - rheMac2.chr10 62683866 62683867 52 - +11664 hg18.chr22_insert 2 hg18.chr22 16855336 16855337 473 - panTro2.chr22 16914710 16914711 471 - rheMac2.chr10 62686293 62686294 481 - +11692 hg18.chr22_insert 1 hg18.chr22 16860119 16860119 320 - panTro2.chr22 16919512 16919513 308 - rheMac2.chr10 62691333 62691334 315 - +11698 hg18.chr22_insert 1 hg18.chr22 16861106 16861106 223 - panTro2.chr22 16920501 16920502 222 - rheMac2.chr10 62692324 62692325 222 - +11958 hg18.chr22_insert 1 hg18.chr22 16748843 16748843 519 - panTro2.chr22 16803662 16803663 518 - rheMac2.chr10 62582329 62582330 525 - +11968 hg18.chr22_insert 1 hg18.chr22 16751184 16751184 201 - panTro2.chr22 16805970 16805971 182 - rheMac2.chr10 62584364 62584365 200 - +11981 hg18.chr22_insert 1 hg18.chr22 16754058 16754058 90 - panTro2.chr22 16808839 16808840 85 - rheMac2.chr10 62587418 62587419 85 - +12098 hg18.chr22_insert 3 hg18.chr22 16897463 16897465 439 + panTro2.chr22 16958821 16958822 435 + rheMac2.chr10 62728978 62728979 422 + +12109 hg18.chr22_insert 1 hg18.chr22 16899618 16899618 191 + panTro2.chr22 16960970 16960971 190 + rheMac2.chr10 62731480 62731481 196 + +12336 hg18.chr22_insert 1 hg18.chr22 16955450 16955450 169 + panTro2.chr22 17023930 17023931 168 + rheMac2.chr10 62786603 62786604 181 + +12382 hg18.chr22_insert 4 hg18.chr22 16969934 16969937 442 + panTro2.chr22 17038951 17038952 438 + rheMac2.chr10 62801826 62801827 435 + +12707 hg18.chr22_insert 3 hg18.chr22 16974201 16974203 241 + panTro2.chr22 17043737 17043738 238 + rheMac2.chr10 62805769 62805770 255 + +12728 hg18.chr22_insert 2 hg18.chr22 16977420 16977421 236 + panTro2.chr22 17047164 17047165 234 + rheMac2.chr10 62809296 62809297 234 + +12734 hg18.chr22_insert 1 hg18.chr22 16978500 16978500 34 + panTro2.chr22 17048236 17048237 33 + rheMac2.chr10 62810361 62810362 33 + +12739 hg18.chr22_insert 74 hg18.chr22 16979324 16979397 282 + panTro2.chr22 17049059 17049060 208 + rheMac2.chr10 62811184 62811185 208 + +12920 hg18.chr22_insert 1 hg18.chr22 16990914 16990914 166 + panTro2.chr22 17060618 17060619 165 + rheMac2.chr10 62823880 62823881 165 + +12966 hg18.chr22_insert 4 hg18.chr22 16997077 16997080 85 + panTro2.chr22 17066755 17066756 81 + rheMac2.chr10 62831295 62831296 80 + +13100 hg18.chr22_insert 1 hg18.chr22 17034225 17034225 137 + panTro2.chr22 17103781 17103782 136 + rheMac2.chr10 62867181 62867182 136 + +13116 hg18.chr22_insert 3 hg18.chr22 17037071 17037073 328 + panTro2.chr22 17106628 17106629 315 + rheMac2.chr10 62870040 62870041 306 + +13140 hg18.chr22_insert 4 hg18.chr22 17042175 17042178 693 - panTro2.chr22 17112461 17112462 689 - rheMac2.chr10 62876115 62876116 682 - +13141 hg18.chr22_insert 1 hg18.chr22 17042366 17042366 3421 - panTro2.chr22 17112648 17112649 3407 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rheMac2.chr1 119593146 119593147 1082 - +13443 hg18.chr22_insert 1 hg18.chr22 17338877 17338877 201 + panTro2.chr22 17402498 17402499 200 + rheMac2.chr10 64341154 64341155 200 - +13454 hg18.chr22_insert 1 hg18.chr22 17341796 17341796 623 + panTro2.chr22 17405397 17405398 612 + rheMac2.chr10 64338748 64338749 612 - +13485 hg18.chr22_insert 1 hg18.chr22 17391835 17391835 240 + panTro2.chr22 17459060 17459061 242 + rheMac2.chr10 63068058 63068059 229 + +13505 hg18.chr22_insert 1 hg18.chr22 17396022 17396022 164 + panTro2.chr22 17463404 17463405 163 + rheMac2.chr10 63072427 63072428 181 + +13509 hg18.chr22_insert 5 hg18.chr22 17396407 17396411 135 + panTro2.chr22 17463806 17463807 130 + rheMac2.chr10 63072821 63072822 130 + +13510 hg18.chr22_insert 1 hg18.chr22 17397278 17397278 908 + panTro2.chr22 17464671 17464672 905 + rheMac2.chr10 63073685 63073686 904 + +13510 hg18.chr22_insert 1 hg18.chr22 17397315 17397315 908 + panTro2.chr22 17464707 17464708 905 + rheMac2.chr10 63073721 63073722 904 + +13894 hg18.chr22_insert 1 hg18.chr22 17412639 17412639 211 - panTro2.chr22 17480312 17480313 210 - rheMac2.chr10 63087669 63087670 208 - +13944 hg18.chr22_insert 1 hg18.chr22 17424115 17424115 44 - panTro2.chr22 17492079 17492080 43 - rheMac2.chr10 63097385 63097386 38 - +14029 hg18.chr22_insert 1 hg18.chr22 17447105 17447105 1273 - panTro2.chr22 17515547 17515548 1289 - rheMac2.chr10 63118012 63118013 1276 - +14036 hg18.chr22_insert 7 hg18.chr22 17450022 17450028 352 - panTro2.chr22 17518457 17518458 329 - rheMac2.chr10 63120807 63120808 340 - +14056 hg18.chr22_insert 1 hg18.chr22 17459830 17459830 1217 - panTro2.chr22 17526121 17526122 1222 - rheMac2.chr10 63131517 63131518 1299 - +14107 hg18.chr22_insert 17 hg18.chr22 17475959 17475975 183 - panTro2.chr22 17542820 17542821 166 - rheMac2.chr10 63147652 63147653 166 - +14135 hg18.chr22_insert 1 hg18.chr22 17479961 17479961 232 - panTro2.chr22 17549031 17549032 231 - rheMac2.chr10 63151672 63151673 241 - +14170 hg18.chr22_insert 4 hg18.chr22 17486131 17486134 235 - panTro2.chr22 17555653 17555654 222 - rheMac2.chr10 63158313 63158314 231 - +14190 hg18.chr22_insert 5 hg18.chr22 17489626 17489630 349 - panTro2.chr22 17559143 17559144 357 - rheMac2.chr10 63161483 63161484 358 - +14341 hg18.chr22_insert 3 hg18.chr22 17503413 17503415 755 - panTro2.chr22 17573224 17573225 690 - rheMac2.chr10 63177005 63177006 818 - +14355 hg18.chr22_insert 16 hg18.chr22 17506135 17506150 56 - panTro2.chr22 17575863 17575864 40 - rheMac2.chr10 63180040 63180041 40 - +14360 hg18.chr22_insert 4 hg18.chr22 17507604 17507607 911 - panTro2.chr22 17577316 17577317 907 - rheMac2.chr10 63181508 63181509 908 - +15178 hg18.chr22_insert 5 hg18.chr22 17615102 17615106 100 - panTro2.chr22 17688477 17688478 95 - rheMac2.chr10 63294914 63294915 63 - +15300 hg18.chr22_insert 3 hg18.chr22 17655516 17655518 242 - panTro2.chr22 17728985 17728986 239 - rheMac2.chr10 63334719 63334720 241 - +15529 hg18.chr22_insert 1 hg18.chr22 17580958 17580958 452 - panTro2.chr22 17653936 17653937 451 - rheMac2.chr10 63257158 63257159 449 - +15530 hg18.chr22_insert 1 hg18.chr22 17581278 17581278 305 - panTro2.chr22 17654255 17654256 304 - rheMac2.chr10 63257463 63257464 285 - +16414 hg18.chr22_insert 1 hg18.chr22 17722997 17722997 1113 - panTro2.chr22 17797123 17797124 1113 - rheMac2.chr10 63397652 63397653 1112 - +16450 hg18.chr22_insert 1 hg18.chr22 17735960 17735960 30 - panTro2.chr22 17810538 17810539 29 - rheMac2.chr10 63410419 63410420 29 - +16494 hg18.chr22_insert 1 hg18.chr22 17748051 17748051 180 - panTro2.chr22 17822617 17822618 179 - rheMac2.chr10 63422579 63422580 179 - +16495 hg18.chr22_insert 21 hg18.chr22 17748297 17748317 323 - panTro2.chr22 17822862 17822863 302 - rheMac2.chr10 63422821 63422822 303 - +16854 hg18.chr22_insert 7 hg18.chr22 17759053 17759059 63 - panTro2.chr22 17833578 17833579 56 - rheMac2.chr10 63433510 63433511 56 - +16992 hg18.chr22_insert 1 hg18.chr22 17787902 17787902 193 - panTro2.chr22 17863657 17863658 200 - rheMac2.chr10 63463580 63463581 155 - +17018 hg18.chr22_insert 2 hg18.chr22 17793401 17793402 177 - panTro2.chr22 17870348 17870349 175 - rheMac2.chr10 63468990 63468991 168 - +17062 hg18.chr22_insert 7 hg18.chr22 17801387 17801393 295 - panTro2.chr22 17878307 17878308 300 - rheMac2.chr10 63477135 63477136 295 - +17069 hg18.chr22_insert 1 hg18.chr22 17802939 17802939 214 - panTro2.chr22 17879855 17879856 210 - rheMac2.chr10 63478679 63478680 213 - +17076 hg18.chr22_insert 2 hg18.chr22 17804291 17804292 112 - panTro2.chr22 17881211 17881212 111 - rheMac2.chr10 63480039 63480040 113 - +17156 hg18.chr22_insert 7 hg18.chr22 17801504 17801510 295 + panTro2.chr22 17878424 17878425 300 + rheMac2.chr10 63477255 63477256 295 + +17163 hg18.chr22_insert 1 hg18.chr22 17802891 17802891 214 + panTro2.chr22 17879810 17879811 210 + rheMac2.chr10 63478631 63478632 213 + +17210 hg18.chr22_insert 1 hg18.chr22 17810354 17810354 296 - panTro2.chr22 17887264 17887265 295 - rheMac2.chr10 63486677 63486678 292 - +17240 hg18.chr22_insert 2 hg18.chr22 17814431 17814432 121 - panTro2.chr22 17891561 17891562 119 - rheMac2.chr10 63490712 63490713 119 - +17243 hg18.chr22_insert 2 hg18.chr22 17814696 17814697 77 - panTro2.chr22 17891824 17891825 75 - rheMac2.chr10 63490975 63490976 75 - +17887 hg18.chr22_insert 16 hg18.chr22 17839928 17839943 614 - panTro2.chr22 17917387 17917388 598 - rheMac2.chr10 63518085 63518086 597 - +17917 hg18.chr22_insert 1 hg18.chr22 17845924 17845924 354 - panTro2.chr22 17923926 17923927 352 - rheMac2.chr10 63524004 63524005 350 - +18375 hg18.chr22_insert 10 hg18.chr22 17848793 17848802 103 + panTro2.chr22 17926792 17926793 92 + rheMac2.chr10 63526855 63526856 94 + +18376 hg18.chr22_insert 1 hg18.chr22 17848904 17848904 276 + panTro2.chr22 17926892 17926893 275 + rheMac2.chr10 63527001 63527002 320 + +18443 hg18.chr22_insert 11 hg18.chr22 17860750 17860760 55 + panTro2.chr22 17939006 17939007 44 + rheMac2.chr10 63541614 63541615 39 + +18511 hg18.chr22_insert 1 hg18.chr22 17872409 17872409 919 + panTro2.chr22 17950707 17950708 918 + rheMac2.chr10 63552987 63552988 908 + +18515 hg18.chr22_insert 1 hg18.chr22 17873343 17873343 705 + panTro2.chr22 17951652 17951653 702 + rheMac2.chr10 63553938 63553939 694 + +18578 hg18.chr22_insert 11 hg18.chr22 17884656 17884666 555 + panTro2.chr22 17964078 17964079 544 + rheMac2.chr10 63565753 63565754 546 + +18597 hg18.chr22_insert 1 hg18.chr22 17892550 17892550 373 - panTro2.chr22 17972117 17972118 372 - rheMac2.chr10 63573613 63573614 373 - +18602 hg18.chr22_insert 1 hg18.chr22 17919620 17919620 248 - panTro2.chr22 18003562 18003563 246 - rheMac2.chr10 63599323 63599324 263 - +18609 hg18.chr22_insert 7 hg18.chr22 17921677 17921683 350 - panTro2.chr22 18005612 18005613 334 - rheMac2.chr10 63602297 63602298 341 - +18610 hg18.chr22_insert 1 hg18.chr22 17921951 17921951 307 - panTro2.chr22 18005870 18005871 306 - rheMac2.chr10 63602548 63602549 306 - +18646 hg18.chr22_insert 5 hg18.chr22 18084703 18084707 551 + panTro2.chr22 18172255 18172256 546 + rheMac2.chr10 63765622 63765623 545 + +18727 hg18.chr22_insert 1 hg18.chr22 18089631 18089631 440 + panTro2.chr22 18177935 18177936 441 + rheMac2.chr10 63770558 63770559 432 + +18857 hg18.chr22_insert 5 hg18.chr22 18126939 18126943 624 + panTro2.chr22 18216195 18216196 619 + rheMac2.chr10 63807231 63807232 619 + +18898 hg18.chr22_insert 1 hg18.chr22 18137933 18137933 231 + panTro2.chr22 18228313 18228314 230 + rheMac2.chr10 63818230 63818231 230 + +18930 hg18.chr22_insert 6 hg18.chr22 18146582 18146587 210 + panTro2.chr22 18237482 18237483 204 + rheMac2.chr10 63826961 63826962 202 + +19432 hg18.chr22_insert 1 hg18.chr22 18157755 18157755 492 - panTro2.chr22 18249462 18249463 491 - rheMac2.chr10 63839719 63839720 501 - +19441 hg18.chr22_insert 1 hg18.chr22 18159147 18159147 121 - panTro2.chr22 18250853 18250854 120 - rheMac2.chr10 63841109 63841110 120 - +19446 hg18.chr22_insert 1 hg18.chr22 18161453 18161453 206 - panTro2.chr22 18253160 18253161 207 - rheMac2.chr10 63842527 63842528 205 - +19486 hg18.chr22_insert 1 hg18.chr22 18172454 18172454 365 - panTro2.chr22 18264614 18264615 365 - rheMac2.chr10 63854101 63854102 387 - +19546 hg18.chr22_insert 2 hg18.chr22 18188650 18188651 618 - panTro2.chr22 18281083 18281084 612 - rheMac2.chr10 63870971 63870972 600 - +19546 hg18.chr22_insert 4 hg18.chr22 18189116 18189119 618 - panTro2.chr22 18281547 18281548 612 - rheMac2.chr10 63871423 63871424 600 - +19552 hg18.chr22_insert 8 hg18.chr22 18190974 18190981 714 - panTro2.chr22 18283417 18283418 706 - rheMac2.chr10 63873282 63873283 712 - +19562 hg18.chr22_insert 1 hg18.chr22 18193197 18193197 509 - panTro2.chr22 18285632 18285633 508 - rheMac2.chr10 63875508 63875509 504 - +19580 hg18.chr22_insert 1 hg18.chr22 18198553 18198553 421 - panTro2.chr22 18291504 18291505 420 - rheMac2.chr10 63881870 63881871 410 - +19587 hg18.chr22_insert 3 hg18.chr22 18201254 18201256 211 - panTro2.chr22 18294200 18294201 208 - rheMac2.chr10 63884826 63884827 213 - +19599 hg18.chr22_insert 2 hg18.chr22 18205514 18205515 1938 - panTro2.chr22 18298821 18298822 1932 - rheMac2.chr10 63889078 63889079 1998 - +19611 hg18.chr22_insert 3 hg18.chr22 18209551 18209553 290 - panTro2.chr22 18302844 18302845 287 - rheMac2.chr10 63893216 63893217 288 - +19623 hg18.chr22_insert 1 hg18.chr22 18213559 18213559 673 - panTro2.chr22 18307198 18307199 678 - rheMac2.chr10 63897121 63897122 674 - +19733 hg18.chr22_insert 1 hg18.chr22 18213842 18213842 390 - panTro2.chr22 18307487 18307488 389 - rheMac2.chr10 63897408 63897409 387 - +19770 hg18.chr22_insert 1 hg18.chr22 18213852 18213852 380 - panTro2.chr22 18307497 18307498 379 - rheMac2.chr10 63897418 63897419 377 - +22101 hg18.chr22_insert 4 hg18.chr22 18265908 18265911 138 - panTro2.chr22 18363070 18363071 135 - rheMac2.chr10 63952561 63952562 134 - +22150 hg18.chr22_insert 1 hg18.chr22 18279971 18279971 1467 - panTro2.chr22 18378070 18378071 1465 - rheMac2.chr10 63965115 63965116 1463 - +22205 hg18.chr22_insert 1 hg18.chr22 18292119 18292119 723 - panTro2.chr22 18391642 18391643 722 - rheMac2.chr10 63979319 63979320 722 - +22243 hg18.chr22_insert 2 hg18.chr22 18301862 18301863 96 - panTro2.chr22 18401718 18401719 99 - rheMac2.chr10 63989063 63989064 97 - +22562 hg18.chr22_insert 4 hg18.chr22 18311209 18311212 180 + panTro2.chr22 18411083 18411084 176 + rheMac2.chr10 63999232 63999233 175 + +22765 hg18.chr22_insert 9 hg18.chr22 18344963 18344971 435 - panTro2.chr22 18445407 18445408 426 - rheMac2.chr10 64032453 64032454 440 - +22767 hg18.chr22_insert 1 hg18.chr22 18345249 18345249 88 - panTro2.chr22 18445684 18445685 87 - rheMac2.chr10 64032744 64032745 86 - +22768 hg18.chr22_insert 2 hg18.chr22 18345468 18345469 729 - panTro2.chr22 18445902 18445903 727 - rheMac2.chr10 64032961 64032962 727 - +22833 hg18.chr22_insert 1 hg18.chr22 18362560 18362560 137 - panTro2.chr22 18464515 18464516 136 - rheMac2.chr10 64049494 64049495 130 - +22925 hg18.chr22_insert 1 hg18.chr22 18380258 18380258 488 - panTro2.chr22 18484226 18484227 502 - rheMac2.chr10 64076277 64076278 476 - +22936 hg18.chr22_insert 1 hg18.chr22 18382977 18382977 1001 - panTro2.chr22 18488819 18488820 995 - rheMac2.chr10 64079283 64079284 1003 - +22939 hg18.chr22_insert 10 hg18.chr22 18384221 18384230 182 - panTro2.chr22 18490068 18490069 172 - rheMac2.chr10 64080552 64080553 172 - +24298 hg18.chr22_insert 4 hg18.chr22 18401045 18401048 236 + panTro2.chr22 18507488 18507489 232 + rheMac2.chr10 64098018 64098019 228 + +24690 hg18.chr22_insert 3 hg18.chr22 18406603 18406605 363 + panTro2.chr22 18513033 18513034 358 + rheMac2.chr10 64104316 64104317 344 + +24776 hg18.chr22_insert 6 hg18.chr22 18429434 18429439 79 + panTro2.chr22 18537376 18537377 73 + rheMac2.chr10 64128100 64128101 73 + +25104 hg18.chr22_insert 1 hg18.chr22 18461666 18461666 524 + panTro2.chr22 18571536 18571537 527 + rheMac2.chr10 64160925 64160926 527 + +25107 hg18.chr22_insert 2 hg18.chr22 18462438 18462439 344 + panTro2.chr22 18572311 18572312 342 + rheMac2.chr10 64161713 64161714 344 + +25163 hg18.chr22_insert 2 hg18.chr22 18474602 18474603 133 + panTro2.chr22 18584164 18584165 131 + rheMac2.chr10 64174909 64174910 131 + +25356 hg18.chr22_insert 4 hg18.chr22 18490500 18490503 118 + panTro2.chr22 18601719 18601720 104 + rheMac2.chr10 64190707 64190708 72 + +25502 hg18.chr22_insert 1 hg18.chr22 18514977 18514977 1179 + panTro2.chr22 18627363 18627364 1177 + rheMac2.chr10 64216557 64216558 1176 + +25502 hg18.chr22_insert 1 hg18.chr22 18515105 18515105 1179 + panTro2.chr22 18627490 18627491 1177 + rheMac2.chr10 64216684 64216685 1176 + +25511 hg18.chr22_insert 6 hg18.chr22 18509948 18509953 246 + panTro2.chr22 18621954 18621955 240 + rheMac2.chr10 64211172 64211173 262 + +25520 hg18.chr22_insert 1 hg18.chr22 18513662 18513662 246 + panTro2.chr22 18625727 18625728 245 + rheMac2.chr10 64215241 64215242 274 + +25610 hg18.chr22_insert 1 hg18.chr22 18621580 18621580 221 - panTro2.chr22 18738991 18738992 220 - rheMac2.chr10 64327360 64327361 224 - +25618 hg18.chr22_insert 1 hg18.chr22 18622911 18622911 129 - panTro2.chr22 18740306 18740307 111 - rheMac2.chr10 64328725 64328726 125 - +25656 hg18.chr22_insert 8 hg18.chr22 18631289 18631296 670 - panTro2.chr22 18748743 18748744 656 - rheMac2.chr10 64337747 64337748 682 - +26056 hg18.chr22_insert 1 hg18.chr22 19092093 19092093 307 + panTro2.chr22 19086970 19086971 306 + rheMac2.chr10 64494040 64494041 306 + +26111 hg18.chr22_insert 10 hg18.chr22 19112767 19112776 458 - panTro2.chr22 19108521 19108522 453 - rheMac2.chr10 64520187 64520188 363 - +26111 hg18.chr22_insert 12 hg18.chr22 19112795 19112806 458 - panTro2.chr22 19108539 19108540 453 - rheMac2.chr10 64520205 64520206 363 - +26151 hg18.chr22_insert 1 hg18.chr22 19126842 19126842 432 - panTro2.chr22 19123022 19123023 430 - rheMac2.chr10 64534542 64534543 432 - +26208 hg18.chr22_insert 31 hg18.chr22 19141289 19141319 60 - panTro2.chr22 19137926 19137927 29 - rheMac2.chr10 64549212 64549213 29 - +26358 hg18.chr22_insert 4 hg18.chr22 19146062 19146065 151 - panTro2.chr22 19144339 19144340 147 - rheMac2.chr10 64554122 64554123 147 - +26447 hg18.chr22_insert 1 hg18.chr22 19177960 19177960 170 - panTro2.chr22 19172779 19172780 169 - rheMac2.chr10 64585330 64585331 177 - +28224 hg18.chr22_insert 1 hg18.chr22 19194205 19194205 133 + panTro2.chr22 19192140 19192141 132 + rheMac2.chr10 64606293 64606294 134 + +28280 hg18.chr22_insert 1 hg18.chr22 19204992 19204992 195 + panTro2.chr22 19202044 19202045 194 + rheMac2.chr10 64618666 64618667 193 + +28284 hg18.chr22_insert 7 hg18.chr22 19205394 19205400 186 + panTro2.chr22 19202445 19202446 179 + rheMac2.chr10 64619052 64619053 159 + +28285 hg18.chr22_insert 1 hg18.chr22 19205692 19205692 454 + panTro2.chr22 19202736 19202737 454 + rheMac2.chr10 64619655 64619656 448 + +28287 hg18.chr22_insert 5 hg18.chr22 19206245 19206249 329 + panTro2.chr22 19203277 19203278 324 + rheMac2.chr10 64620186 64620187 324 + +28622 hg18.chr22_insert 1 hg18.chr22 19240389 19240389 294 + panTro2.chr22 19238262 19238263 291 + rheMac2.chr10 64656539 64656540 299 + +28681 hg18.chr22_insert 1 hg18.chr22 19250238 19250238 587 + panTro2.chr22 19248080 19248081 586 + rheMac2.chr10 64667091 64667092 587 + +28861 hg18.chr22_insert 5 hg18.chr22 19270558 19270562 319 + panTro2.chr22 19268440 19268441 305 + rheMac2.chr10 64688596 64688597 286 + +28861 hg18.chr22_insert 9 hg18.chr22 19270572 19270580 319 + panTro2.chr22 19268449 19268450 305 + rheMac2.chr10 64688605 64688606 286 + +28871 hg18.chr22_insert 1 hg18.chr22 19301184 19301184 192 - panTro2.chr22 19300507 19300508 190 - rheMac2.chr10 64711169 64711170 194 - +28872 hg18.chr22_insert 1 hg18.chr22 19301398 19301398 50 - panTro2.chr22 19300719 19300720 51 - rheMac2.chr10 64711386 64711387 54 - +29096 hg18.chr22_insert 2 hg18.chr22 19392955 19392956 331 - panTro2.chr22 19425493 19425494 329 - rheMac2.chr10 65208538 65208539 334 + +29140 hg18.chr22_insert 1 hg18.chr22 19402967 19402967 240 - panTro2.chr22 19435555 19435556 239 - rheMac2.chr10 65199473 65199474 239 + +29176 hg18.chr22_insert 4 hg18.chr22 19410155 19410158 280 - panTro2.chr22 19442969 19442970 279 - rheMac2.chr10 65191667 65191668 283 + +29178 hg18.chr22_insert 13 hg18.chr22 19410610 19410622 192 - panTro2.chr22 19443423 19443424 179 - rheMac2.chr10 65191469 65191470 200 + +29218 hg18.chr22_insert 1 hg18.chr22 19416740 19416740 924 - panTro2.chr22 19449466 19449467 953 - rheMac2.chr10 65184560 65184561 913 + +29273 hg18.chr22_insert 1 hg18.chr22 19428489 19428489 295 - panTro2.chr22 19461184 19461185 294 - rheMac2.chr10 65172730 65172731 294 + +29278 hg18.chr22_insert 1 hg18.chr22 19429454 19429454 921 - panTro2.chr22 19462148 19462149 921 - rheMac2.chr10 65170715 65170716 925 + +29317 hg18.chr22_insert 1 hg18.chr22 19438692 19438692 266 - panTro2.chr22 19471446 19471447 265 - rheMac2.chr10 65160489 65160490 268 + +29428 hg18.chr22_insert 1 hg18.chr22 19460850 19460850 168 - panTro2.chr22 19493881 19493882 167 - rheMac2.chr10 65141152 65141153 166 + +29483 hg18.chr22_insert 1 hg18.chr22 19470504 19470504 212 - panTro2.chr22 19503762 19503763 211 - rheMac2.chr10 65130850 65130851 210 + +29830 hg18.chr22_insert 1 hg18.chr22 19460960 19460960 168 + panTro2.chr22 19493991 19493992 167 + rheMac2.chr10 65141263 65141264 166 - +29928 hg18.chr22_insert 1 hg18.chr22 19470650 19470650 212 + panTro2.chr22 19503908 19503909 211 + rheMac2.chr10 65130997 65130998 210 - +29938 hg18.chr22_insert 1 hg18.chr22 19483124 19483124 522 - panTro2.chr22 19517528 19517529 520 - rheMac2.chr10 65118109 65118110 527 + +30052 hg18.chr22_insert 2 hg18.chr22 19507703 19507704 282 - panTro2.chr22 19544036 19544037 280 - rheMac2.chr10 65091769 65091770 279 + +30086 hg18.chr22_insert 5 hg18.chr22 19520074 19520078 348 - panTro2.chr22 19556403 19556404 343 - rheMac2.chr10 65084907 65084908 336 + +30089 hg18.chr22_insert 2 hg18.chr22 19520918 19520919 604 - panTro2.chr22 19557242 19557243 602 - rheMac2.chr10 65084301 65084302 614 + +30113 hg18.chr22_insert 1 hg18.chr22 19524102 19524102 49 - panTro2.chr22 19560436 19560437 48 - rheMac2.chr10 65081066 65081067 69 + +30197 hg18.chr22_insert 4 hg18.chr22 19541898 19541901 269 - panTro2.chr22 19579129 19579130 265 - rheMac2.chr10 65063692 65063693 272 + +30285 hg18.chr22_insert 1 hg18.chr22 19555413 19555413 242 + panTro2.chr22 19593050 19593051 241 + rheMac2.chr10 65048987 65048988 247 - +30301 hg18.chr22_insert 3 hg18.chr22 19557132 19557134 340 + panTro2.chr22 19595530 19595531 337 + rheMac2.chr10 65046787 65046788 333 - +30307 hg18.chr22_insert 27 hg18.chr22 19558528 19558554 142 + panTro2.chr22 19596914 19596915 115 + rheMac2.chr10 65045793 65045794 112 - +30397 hg18.chr22_insert 1 hg18.chr22 19573374 19573374 196 + panTro2.chr22 19622890 19622891 195 + rheMac2.chr10 65030629 65030630 196 - +30661 hg18.chr22_insert 1 hg18.chr22 19608844 19608844 74 + panTro2.chr22 19658881 19658882 73 + rheMac2.chr10 64986012 64986013 73 - +30688 hg18.chr22_insert 2 hg18.chr22 19614864 19614865 254 + panTro2.chr22 19666386 19666387 252 + rheMac2.chr10 64978744 64978745 249 - +30715 hg18.chr22_insert 5 hg18.chr22 19619093 19619097 302 + panTro2.chr22 19670615 19670616 296 + rheMac2.chr10 64969142 64969143 282 - +30756 hg18.chr22_insert 2 hg18.chr22 19623976 19623977 201 + panTro2.chr22 19675894 19675895 199 + rheMac2.chr10 64964910 64964911 194 - +30761 hg18.chr22_insert 1 hg18.chr22 19624885 19624885 52 + panTro2.chr22 19676804 19676805 51 + rheMac2.chr10 64963580 64963581 22 - +30781 hg18.chr22_insert 1 hg18.chr22 19631452 19631452 487 + panTro2.chr22 19683382 19683383 486 + rheMac2.chr10 64957307 64957308 467 - +30783 hg18.chr22_insert 2 hg18.chr22 19632337 19632338 184 + panTro2.chr22 19684291 19684292 182 + rheMac2.chr10 64956047 64956048 183 - +30788 hg18.chr22_insert 2 hg18.chr22 19633411 19633412 18 + panTro2.chr22 19685363 19685364 16 + rheMac2.chr10 64955089 64955090 10 - +30797 hg18.chr22_insert 1 hg18.chr22 19634951 19634951 84 + panTro2.chr22 19686900 19686901 83 + rheMac2.chr10 64953559 64953560 84 - +30803 hg18.chr22_insert 1 hg18.chr22 19636305 19636305 397 + panTro2.chr22 19688253 19688254 396 + rheMac2.chr10 64952407 64952408 394 - +30808 hg18.chr22_insert 6 hg18.chr22 19637712 19637717 291 + panTro2.chr22 19689663 19689664 285 + rheMac2.chr10 64950762 64950763 285 - +30821 hg18.chr22_insert 4 hg18.chr22 19643414 19643417 556 + panTro2.chr22 19696628 19696629 553 + rheMac2.chr10 64944478 64944479 551 - +30833 hg18.chr22_insert 1 hg18.chr22 19646356 19646356 621 + panTro2.chr22 19699559 19699560 617 + rheMac2.chr10 64942730 64942731 585 - +30834 hg18.chr22_insert 1 hg18.chr22 19647051 19647051 655 + panTro2.chr22 19700250 19700251 654 + rheMac2.chr10 64942168 64942169 672 - +30928 hg18.chr22_insert 1 hg18.chr22 19650941 19650941 205 + panTro2.chr22 19704483 19704484 204 + rheMac2.chr10 64937336 64937337 206 - +31008 hg18.chr22_insert 1 hg18.chr22 19654274 19654274 60 + panTro2.chr22 19707800 19707801 59 + rheMac2.chr10 64934339 64934340 59 - +31063 hg18.chr22_insert 3 hg18.chr22 19659264 19659266 613 + panTro2.chr22 19712960 19712961 606 + rheMac2.chr10 64927707 64927708 600 - +31063 hg18.chr22_insert 4 hg18.chr22 19659749 19659752 613 + panTro2.chr22 19713442 19713443 606 + rheMac2.chr10 64928182 64928183 600 - +31101 hg18.chr22_insert 2 hg18.chr22 19665020 19665021 801 + panTro2.chr22 19718993 19718994 794 + rheMac2.chr10 64922046 64922047 800 - +31101 hg18.chr22_insert 1 hg18.chr22 19665127 19665127 801 + panTro2.chr22 19719098 19719099 794 + rheMac2.chr10 64922151 64922152 800 - +31209 hg18.chr22_insert 2 hg18.chr22 19668901 19668902 70 + panTro2.chr22 19722869 19722870 68 + rheMac2.chr10 64918355 64918356 68 - +31211 hg18.chr22_insert 4 hg18.chr22 19669045 19669048 68 + panTro2.chr22 19723011 19723012 64 + rheMac2.chr10 64918277 64918278 54 - +31226 hg18.chr22_insert 4 hg18.chr22 19670793 19670796 302 + panTro2.chr22 19724776 19724777 298 + rheMac2.chr10 64916172 64916173 271 - +31412 hg18.chr22_insert 1 hg18.chr22 19687630 19687630 201 + panTro2.chr22 19741771 19741772 203 + rheMac2.chr10 64898134 64898135 180 - +31553 hg18.chr22_insert 1 hg18.chr22 19697159 19697159 822 - panTro2.chr22 19751749 19751750 821 - rheMac2.chr10 64846172 64846173 820 - +31815 hg18.chr22_insert 1 hg18.chr22 19701007 19701007 172 + panTro2.chr22 19755620 19755621 151 + rheMac2.chr10 64850007 64850008 156 + +31859 hg18.chr22_insert 4 hg18.chr22 19708435 19708438 329 + panTro2.chr22 19763041 19763042 331 + rheMac2.chr10 64873257 64873258 328 - +32051 hg18.chr22_insert 1 hg18.chr22 19742827 19742827 206 + panTro2.chr22 19798834 19798835 206 + rheMac2.chr10 64835011 64835012 210 - +32073 hg18.chr22_insert 3 hg18.chr22 19746678 19746680 133 + panTro2.chr22 19802700 19802701 130 + rheMac2.chr10 64831078 64831079 129 - +32084 hg18.chr22_insert 3 hg18.chr22 19747980 19747982 143 + panTro2.chr22 19805355 19805356 147 + rheMac2.chr10 64889320 64889321 147 + +32116 hg18.chr22_insert 2 hg18.chr22 19802849 19802850 2291 + panTro2.chr22 19848438 19848439 2289 + rheMac2.chr10 64469996 64469997 2294 - +32122 hg18.chr22_insert 2 hg18.chr22 19802333 19802334 2291 - panTro2.chr22 19847922 19847923 2289 - rheMac2.chr10 64469493 64469494 2294 + +32195 hg18.chr22_insert 3 hg18.chr22 19904878 19904880 47 - panTro2.chr22_random 443969 443970 44 - rheMac2.chr10 68028537 68028538 38 + +32215 hg18.chr22_insert 1 hg18.chr22 19913667 19913667 743 - panTro2.chr22_random 453112 453113 742 - rheMac2.chr1 119588971 119588972 743 - +32231 hg18.chr22_insert 1 hg18.chr22 19917579 19917579 77 - panTro2.chr22_random 457019 457020 76 - rheMac2.chr1 119592638 119592639 76 - +32246 hg18.chr22_insert 2 hg18.chr22 19920840 19920841 1074 - panTro2.chr22_random 460295 460296 1077 - rheMac2.chr1 119595783 119595784 1113 - +32259 hg18.chr22_insert 1 hg18.chr22 19987360 19987360 857 - panTro2.chr22 19860984 19860985 847 - rheMac2.chr10 67571688 67571689 845 + +32261 hg18.chr22_insert 27 hg18.chr22 19988992 19989018 3371 - panTro2.chr22 19862616 19862617 3343 - rheMac2.chr10 67567143 67567144 3247 + +32261 hg18.chr22_insert 1 hg18.chr22 19990864 19990864 3371 - panTro2.chr22 19864461 19864462 3343 - rheMac2.chr10 67568908 67568909 3247 + +32268 hg18.chr22_insert 6 hg18.chr22 20101892 20101897 110 + panTro2.chr22 20003317 20003318 104 + rheMac2.chr10 65271728 65271729 103 - +32271 hg18.chr22_insert 10 hg18.chr22 20102633 20102642 1975 + panTro2.chr22 20004609 20004610 1964 + rheMac2.chr10 65269823 65269824 1972 - +32271 hg18.chr22_insert 1 hg18.chr22 20104189 20104189 1975 + panTro2.chr22 20006155 20006156 1964 + rheMac2.chr10 65271370 65271371 1972 - +32277 hg18.chr22_insert 1 hg18.chr22 20106372 20106372 1660 + panTro2.chr22 20008335 20008336 1657 + rheMac2.chr10 65266592 65266593 1654 - +32277 hg18.chr22_insert 2 hg18.chr22 20107298 20107299 1660 + panTro2.chr22 20009260 20009261 1657 + rheMac2.chr10 65267514 65267515 1654 - +32324 hg18.chr22_insert 1 hg18.chr22 20116722 20116722 47 + panTro2.chr22 20018938 20018939 46 + rheMac2.chr10 65255929 65255930 46 - +32330 hg18.chr22_insert 1 hg18.chr22 20117775 20117775 257 + panTro2.chr22 20019985 20019986 264 + rheMac2.chr10 65254951 65254952 266 - +32377 hg18.chr22_insert 1 hg18.chr22 20124346 20124346 166 + panTro2.chr22 20026555 20026556 169 + rheMac2.chr10 65247621 65247622 168 - +32379 hg18.chr22_insert 1 hg18.chr22 20124686 20124686 1259 + panTro2.chr22 20026898 20026899 1256 + rheMac2.chr10 65246190 65246191 1258 - +32382 hg18.chr22_insert 1 hg18.chr22 20126110 20126110 370 + panTro2.chr22 20028319 20028320 382 + rheMac2.chr10 65245613 65245614 369 - +32432 hg18.chr22_insert 1 hg18.chr22 20132679 20132679 196 + panTro2.chr22 20034914 20034915 195 + rheMac2.chr10 65239339 65239340 199 - +32887 hg18.chr22_insert 1 hg18.chr22 20170127 20170127 802 - panTro2.chr22_random 515921 515922 799 - rheMac2.chr10 65185998 65185999 844 + +32909 hg18.chr22_insert 3 hg18.chr22 20176227 20176229 453 - panTro2.chr22_random 522128 522129 450 - rheMac2.chr10 65244778 65244779 450 - +32912 hg18.chr22_insert 1 hg18.chr22 20177554 20177554 261 - panTro2.chr22 20028315 20028316 260 + rheMac2.chr10 65246096 65246097 260 - +32913 hg18.chr22_insert 1 hg18.chr22 20177663 20177663 1269 - panTro2.chr22 20026897 20026898 1266 + rheMac2.chr10 65246199 65246200 1268 - +32915 hg18.chr22_insert 1 hg18.chr22 20179076 20179076 152 - panTro2.chr22 20026552 20026553 151 + rheMac2.chr10 65247600 65247601 152 - +32951 hg18.chr22_insert 1 hg18.chr22 20185816 20185816 236 - panTro2.chr22 20019985 20019986 235 + rheMac2.chr10 65254980 65254981 237 - +32956 hg18.chr22_insert 1 hg18.chr22 20186492 20186492 323 - panTro2.chr22 20018938 20018939 321 + rheMac2.chr10 65255658 65255659 317 - +33001 hg18.chr22_insert 1 hg18.chr22 20195994 20195994 1356 - panTro2.chr22 20008335 20008336 1353 + rheMac2.chr10 65266076 65266077 1352 - +33001 hg18.chr22_insert 2 hg18.chr22 20196929 20196930 1356 - panTro2.chr22 20009269 20009270 1353 + rheMac2.chr10 65266998 65266999 1352 - +33009 hg18.chr22_insert 1 hg18.chr22 20200734 20200734 1523 - panTro2.chr22 20006152 20006153 1522 + rheMac2.chr10 65270939 65270940 1522 - +33012 hg18.chr22_insert 6 hg18.chr22 20201528 20201533 117 - panTro2.chr22 20003317 20003318 111 + rheMac2.chr10 65271735 65271736 110 - +33379 hg18.chr22_insert 1 hg18.chr22 20263472 20263472 309 + panTro2.chr22 20171397 20171398 290 + rheMac2.chr10 65335731 65335732 290 + +33388 hg18.chr22_insert 3 hg18.chr22 20264741 20264743 790 + panTro2.chr22 20172665 20172666 790 + rheMac2.chr10 65336983 65336984 759 + +33407 hg18.chr22_insert 4 hg18.chr22 20270696 20270699 576 + panTro2.chr22 20178884 20178885 576 + rheMac2.chr10 65343330 65343331 560 + +33612 hg18.chr22_insert 1 hg18.chr22 20284185 20284185 60 + panTro2.chr22 20192433 20192434 59 + rheMac2.chr10 65356174 65356175 59 + +33632 hg18.chr22_insert 1 hg18.chr22 20289234 20289234 40 + panTro2.chr22 20197795 20197796 39 + rheMac2.chr10 65360900 65360901 39 + +34203 hg18.chr22_insert 1 hg18.chr22 20359255 20359255 280 + panTro2.chr22 20271368 20271369 279 + rheMac2.chr10 65431215 65431216 283 + +34480 hg18.chr22_insert 2 hg18.chr22 20401454 20401455 113 - panTro2.chr22 20314703 20314704 111 - rheMac2.chr10 65470359 65470360 107 - +34483 hg18.chr22_insert 2 hg18.chr22 20402285 20402286 458 - panTro2.chr22 20315533 20315534 455 - rheMac2.chr10 65471467 65471468 436 - +34487 hg18.chr22_insert 2 hg18.chr22 20403032 20403033 157 - panTro2.chr22 20316276 20316277 143 - rheMac2.chr10 65472521 65472522 136 - +34500 hg18.chr22_insert 4 hg18.chr22 20408116 20408119 612 - panTro2.chr22 20321339 20321340 609 - rheMac2.chr10 65474977 65474978 615 - +34534 hg18.chr22_insert 1 hg18.chr22 20418203 20418203 140 - panTro2.chr22 20331414 20331415 139 - rheMac2.chr10 65485958 65485959 139 - +34546 hg18.chr22_insert 2 hg18.chr22 20444332 20444333 334 - panTro2.chr22 20353319 20353320 332 - rheMac2.chr10 65514746 65514747 333 - +35369 hg18.chr22_insert 22 hg18.chr22 20494854 20494875 221 - panTro2.chr22 20405705 20405706 199 - rheMac2.chr10 65567909 65567910 198 - +35433 hg18.chr22_insert 1 hg18.chr22 20506439 20506439 305 - panTro2.chr22 20417488 20417489 303 - rheMac2.chr10 65579870 65579871 291 - +35433 hg18.chr22_insert 1 hg18.chr22 20506697 20506697 305 - panTro2.chr22 20417745 20417746 303 - rheMac2.chr10 65580127 65580128 291 - +35496 hg18.chr22_insert 3 hg18.chr22 20515136 20515138 156 - panTro2.chr22 20426475 20426476 153 - rheMac2.chr10 65590174 65590175 153 - +35538 hg18.chr22_insert 1 hg18.chr22 20520744 20520744 333 - panTro2.chr22 20432718 20432719 332 - rheMac2.chr10 65595779 65595780 332 - +35552 hg18.chr22_insert 1 hg18.chr22 20522625 20522625 326 - panTro2.chr22 20434594 20434595 324 - rheMac2.chr10 65597641 65597642 332 - +35577 hg18.chr22_insert 2 hg18.chr22 20528917 20528918 503 - panTro2.chr22 20441245 20441246 501 - rheMac2.chr10 65604229 65604230 502 - +35588 hg18.chr22_insert 6 hg18.chr22 20531076 20531081 276 - panTro2.chr22 20444705 20444706 270 - rheMac2.chr10 65606094 65606095 238 - +35592 hg18.chr22_insert 78 hg18.chr22 20533393 20533470 314 - panTro2.chr22 20447164 20447165 234 - rheMac2.chr10 65608380 65608381 240 - +35596 hg18.chr22_insert 1 hg18.chr22 20534118 20534118 120 - panTro2.chr22 20447808 20447809 119 - rheMac2.chr10 65609031 65609032 119 - +35609 hg18.chr22_insert 1 hg18.chr22 20540582 20540582 369 - panTro2.chr22 20454277 20454278 368 - rheMac2.chr10 65612651 65612652 362 - +35641 hg18.chr22_insert 3 hg18.chr22 20546393 20546395 391 - panTro2.chr22 20460101 20460102 388 - rheMac2.chr10 65619343 65619344 387 - +35737 hg18.chr22_insert 8 hg18.chr22 20462620 20462627 62 - panTro2.chr22 20373163 20373164 51 - rheMac2.chr10 65535720 65535721 51 - +35762 hg18.chr22_insert 2 hg18.chr22 20466585 20466586 114 - panTro2.chr22 20377460 20377461 112 - rheMac2.chr10 65539721 65539722 112 - +35769 hg18.chr22_insert 4 hg18.chr22 20468550 20468553 435 - panTro2.chr22 20379449 20379450 431 - rheMac2.chr10 65542167 65542168 429 - +35770 hg18.chr22_insert 6 hg18.chr22 20469077 20469082 145 - panTro2.chr22 20379976 20379977 143 - rheMac2.chr10 65542694 65542695 126 - +35807 hg18.chr22_insert 3 hg18.chr22 20474751 20474753 83 - panTro2.chr22 20385692 20385693 80 - rheMac2.chr10 65548456 65548457 80 - +35873 hg18.chr22_insert 1 hg18.chr22 20489706 20489706 132 - panTro2.chr22 20400543 20400544 131 - rheMac2.chr10 65562459 65562460 131 -