Mercurial > repos > devteam > emboss_5

comparison tool_dependencies.xml @ 4:c159a6ded912

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author devteam
date Wed, 19 Jun 2013 12:22:14 -0400
parents a52e6cbbb469
children a6aa7f3cbe7d
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3:b45f604a08ac 4:c159a6ded912
2 <tool_dependency> 2 <tool_dependency>
3 <package name="emboss" version="5.0.0"> 3 <package name="emboss" version="5.0.0">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions>
6 <action type="download_by_url">ftp://emboss.open-bio.org/pub/EMBOSS/old/5.0.0/EMBOSS-5.0.0.tar.gz</action> 6 <action type="download_by_url">ftp://emboss.open-bio.org/pub/EMBOSS/old/5.0.0/EMBOSS-5.0.0.tar.gz</action>
7 <action type="shell_command">./configure --without-x --prefix=$INSTALL_DIR</action> 7 <action type="shell_command">./configure --prefix=$INSTALL_DIR</action>
8 <action type="shell_command">make</action> 8 <action type="shell_command">make</action>
9 <action type="shell_command">make install</action> 9 <action type="shell_command">make install</action>
10 </actions> 10 </actions>
11 <actions> 11 <actions>
12 <action type="download_by_url">ftp://emboss.open-bio.org/pub/EMBOSS/old/5.0.0/PHYLIP-3.6b.tar.gz</action> 12 <action type="download_by_url">ftp://emboss.open-bio.org/pub/EMBOSS/old/5.0.0/PHYLIP-3.6b.tar.gz</action>
13 <action type="shell_command">./configure --without-x --prefix=$INSTALL_DIR</action> 13 <action type="shell_command">./configure --prefix=$INSTALL_DIR CFLAGS='-I$INSTALL_DIR/include'</action>
14 <action type="shell_command">make</action> 14 <action type="shell_command">make</action>
15 <action type="shell_command">make install</action> 15 <action type="shell_command">make install</action>
16 </actions> 16 </actions>
17 </install> 17 </install>
18 <readme> 18 <readme>
19 These links provide information for building the Emboss package in most environments . 19 Compiling the Emboss binaries requires the X11 client libraries and header files.
20
21 These links provide information for building the Emboss package in most environments.
20 22
21 System requirements 23 System requirements
22 http://emboss.sourceforge.net/download/#Requirements 24 http://emboss.sourceforge.net/download/#Requirements
23 25
24 Platform-dependent notes 26 Platform-dependent notes