Mercurial > repos > devteam > emboss_5

comparison emboss_preg.xml @ 10:d49956b87f7e draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
author iuc
date Wed, 08 Feb 2017 12:42:22 -0500
parents
children 8992d258e42f
comparison
equal deleted inserted replaced
9:511429456d3c 10:d49956b87f7e
1 <tool id="EMBOSS: preg78" name="preg" version="5.0.0">
2 <description>Regular expression search of a protein sequence</description>
3 <macros>
4 <import>macros.xml</import>
5 </macros>
6 <expand macro="requirements" />
7 <command>preg -sequence '$input1' -outfile '$out_file1' -pattern '$pattern' -auto</command>
8 <inputs>
9 <param name="input1" type="data" format="data" label="Sequence" />
10 <param name="pattern" type="text" value="(ACD)" label="Regular expression pattern" />
11 </inputs>
12 <outputs>
13 <data name="out_file1" format="preg" />
14 </outputs>
15 <help>
16 You can view the original documentation here_.
17
18 .. _here: http://galaxy-iuc.github.io/emboss-5.0-docs/preg.html
19 </help>
20 <expand macro="citations" />
21 </tool>