Mercurial > repos > devteam > fastq_combiner

comparison fastq_combiner.xml @ 5:9115b978ce10 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/galaxy_sequence_utils/fastq_combiner commit bb5df9e62585e12f08dfc0a9f86eec8e205b4845
author iuc
date Fri, 04 Oct 2024 10:34:21 +0000
parents f1dc2a761c30
children
comparison
equal deleted inserted replaced
4:f1dc2a761c30 5:9115b978ce10
1 <tool id="fastq_combiner" name="Combine FASTA and QUAL" version="@TOOL_VERSION@"> 1 <tool id="fastq_combiner" name="Combine FASTA and QUAL" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
2 <description>into FASTQ</description> 2 <description>into FASTQ</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements"/>
7 <edam_topics> 6 <edam_topics>
8 <edam_topic>topic_0622</edam_topic> 7 <edam_topic>topic_0622</edam_topic>
9 </edam_topics> 8 </edam_topics>
10 <edam_operations> 9 <edam_operations>
11 <edam_operation>operation_3436</edam_operation> 10 <edam_operation>operation_3436</edam_operation>
12 </edam_operations> 11 </edam_operations>
12 <expand macro="requirements"/>
13 <command><![CDATA[ 13 <command><![CDATA[
14 gx-fastq-combiner '$fasta_file' '${fasta_file.extension}' '$qual_file' '${qual_file.extension}' '$output_file' $force_quality_encoding 14 gx-fastq-combiner '$fasta_file' '${fasta_file.extension}' '$qual_file' '${qual_file.extension}' '$output_file' $force_quality_encoding
15 ]]></command> 15 ]]></command>
16 <inputs> 16 <inputs>
17 <param name="fasta_file" type="data" format="fasta,csfasta" label="FASTA File" /> 17 <param name="fasta_file" type="data" format="fasta,csfasta" label="FASTA File" />