Mercurial > repos > devteam > fastq_manipulation

diff fastq_manipulation.xml @ 5:e30352e889fe draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/galaxy_sequence_utils/fastq_manipulation commit bb5df9e62585e12f08dfc0a9f86eec8e205b4845
author iuc
date Fri, 04 Oct 2024 10:34:44 +0000
parents 5b87038565bb
children
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--- a/fastq_manipulation.xml	Wed Feb 19 12:31:39 2020 -0500
+++ b/fastq_manipulation.xml	Fri Oct 04 10:34:44 2024 +0000
@@ -1,17 +1,17 @@
-<tool id="fastq_manipulation" name="Manipulate FASTQ" version="@TOOL_VERSION@">
-    <options sanitize="false" />
+<tool id="fastq_manipulation" name="Manipulate FASTQ" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
     <!-- This tool uses a file to rely all parameter information (actually a dynamically generated python module), we can safely not sanitize any parameters -->
     <description>reads on various attributes</description>
     <macros>
         <import>macros.xml</import>
     </macros>
-    <expand macro="requirements"/>
+    <options sanitize="false" />
     <edam_topics>
         <edam_topic>topic_0622</edam_topic>
     </edam_topics>
     <edam_operations>
         <edam_operation>operation_0233</edam_operation>
     </edam_operations>
+    <expand macro="requirements"/>
     <command><![CDATA[
 gx-fastq-manipulation '$input_file' '$fastq_manipulation_file' '$output_file' '$output_file.files_path' '${input_file.extension[len('fastq'):]}'
     ]]></command>