Mercurial > repos > devteam > fastqc
diff test-data/fastqc_data.txt @ 15:2b0c9d9fc6ca draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 35d722c0cafe2a2f2e4e2f73c265ae56ae237997
| author | iuc |
|---|---|
| date | Fri, 24 Nov 2017 08:18:41 -0500 |
| parents | 3fdc1a74d866 |
| children | ff9530579d1f |
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--- a/test-data/fastqc_data.txt Mon Oct 23 13:26:32 2017 -0400 +++ b/test-data/fastqc_data.txt Fri Nov 24 08:18:41 2017 -0500 @@ -1,7 +1,7 @@ -##FastQC 0.11.4 +##FastQC 0.11.5 >>Basic Statistics pass #Measure Value -Filename 1000gsample.fastq +Filename 1000gsample_fastq_bz2_dat.bz2 File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5000 @@ -638,7 +638,7 @@ 32 51.0 33 5.0 >>END_MODULE ->>Per base sequence content warn +>>Per base sequence content pass #Base G A T C 1 21.5 32.64 25.919999999999998 19.939999999999998 2 24.04 31.72 26.540000000000003 17.7 @@ -886,49 +886,49 @@ CGGTTCAGCAGGAATGCCGAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAGAC 7 0.13999999999999999 Illumina Paired End PCR Primer 2 (100% over 35bp) >>END_MODULE >>Adapter Content pass -#Position Illumina Universal Adapter Illumina Small RNA Adapter Nextera Transposase Sequence SOLID Small RNA Adapter -1 0.0 0.0 0.0 0.0 -2 0.02 0.0 0.0 0.0 -3 0.02 0.0 0.0 0.0 -4 0.02 0.0 0.0 0.0 -5 0.02 0.0 0.0 0.0 -6 0.02 0.0 0.0 0.0 -7 0.02 0.0 0.0 0.0 -8 0.02 0.0 0.0 0.0 -9 0.02 0.0 0.0 0.0 -10 0.02 0.0 0.0 0.0 -11 0.02 0.0 0.0 0.0 -12 0.02 0.0 0.0 0.0 -13 0.02 0.0 0.0 0.0 -14 0.02 0.0 0.0 0.0 -15 0.02 0.0 0.0 0.0 -16 0.02 0.0 0.0 0.0 -17 0.02 0.0 0.0 0.0 -18 0.02 0.0 0.0 0.0 -19 0.06 0.0 0.0 0.0 -20 0.36 0.0 0.0 0.0 -21 0.36 0.0 0.0 0.0 -22 0.36 0.0 0.0 0.0 -23 0.36 0.0 0.0 0.0 -24 0.36 0.0 0.0 0.0 -25 0.4 0.0 0.0 0.0 -26 0.4 0.0 0.0 0.0 -27 0.42 0.0 0.0 0.0 -28 0.62 0.0 0.0 0.0 -29 0.66 0.0 0.0 0.0 -30 0.68 0.0 0.0 0.0 -31 0.68 0.0 0.0 0.0 -32 0.68 0.0 0.0 0.0 -33 0.68 0.0 0.0 0.0 -34 0.7 0.0 0.0 0.0 -35 0.76 0.0 0.0 0.0 -36 0.8 0.0 0.0 0.0 -37 0.88 0.0 0.0 0.0 -38 1.0 0.0 0.0 0.0 -39 1.12 0.0 0.0 0.0 -40 1.22 0.0 0.0 0.0 -41 1.38 0.0 0.0 0.0 -42 1.48 0.0 0.0 0.0 +#Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter +1 0.0 0.0 0.0 0.0 0.0 +2 0.02 0.0 0.0 0.0 0.0 +3 0.02 0.0 0.0 0.0 0.0 +4 0.02 0.0 0.0 0.0 0.0 +5 0.02 0.0 0.0 0.0 0.0 +6 0.02 0.0 0.0 0.0 0.0 +7 0.02 0.0 0.0 0.0 0.0 +8 0.02 0.0 0.0 0.0 0.0 +9 0.02 0.0 0.0 0.0 0.0 +10 0.02 0.0 0.0 0.0 0.0 +11 0.02 0.0 0.0 0.0 0.0 +12 0.02 0.0 0.0 0.0 0.0 +13 0.02 0.0 0.0 0.0 0.0 +14 0.02 0.0 0.0 0.0 0.0 +15 0.02 0.0 0.0 0.0 0.0 +16 0.02 0.0 0.0 0.0 0.0 +17 0.02 0.0 0.0 0.0 0.0 +18 0.02 0.0 0.0 0.0 0.0 +19 0.06 0.0 0.0 0.0 0.0 +20 0.36 0.0 0.0 0.0 0.0 +21 0.36 0.0 0.0 0.0 0.0 +22 0.36 0.0 0.0 0.0 0.0 +23 0.36 0.0 0.0 0.0 0.0 +24 0.36 0.0 0.0 0.0 0.0 +25 0.4 0.0 0.0 0.0 0.0 +26 0.4 0.0 0.0 0.0 0.0 +27 0.42 0.0 0.0 0.0 0.0 +28 0.62 0.0 0.0 0.0 0.0 +29 0.66 0.0 0.0 0.0 0.0 +30 0.68 0.0 0.0 0.0 0.0 +31 0.68 0.0 0.0 0.0 0.0 +32 0.68 0.0 0.0 0.0 0.0 +33 0.68 0.0 0.0 0.0 0.0 +34 0.7 0.0 0.0 0.0 0.0 +35 0.76 0.0 0.0 0.0 0.0 +36 0.8 0.0 0.0 0.0 0.0 +37 0.88 0.0 0.0 0.0 0.0 +38 1.0 0.0 0.0 0.0 0.0 +39 1.12 0.0 0.0 0.0 0.0 +40 1.22 0.0 0.0 0.0 0.0 +41 1.38 0.0 0.0 0.0 0.0 +42 1.48 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content pass >>END_MODULE