Mercurial > repos > devteam > fastqtofasta

changeset 1:723b5b38d88a draft

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/galaxy_sequence_utils/fastqtofasta commit a1517c9d22029095120643bbe2c8fa53754dd2b7
author devteam
date Wed, 11 Nov 2015 12:43:11 -0500
parents 3571553aeb20
children 4844c1810c16
files fastq_to_fasta.xml tool_dependencies.xml
diffstat 2 files changed, 6 insertions(+), 7 deletions(-) [+]
line wrap: on
line diff
--- a/fastq_to_fasta.xml	Mon Jan 27 09:27:22 2014 -0500
+++ b/fastq_to_fasta.xml	Wed Nov 11 12:43:11 2015 -0500
@@ -32,12 +32,11 @@
 
 This tool converts FASTQ sequencing reads to FASTA sequences.
 
-------
-
-**Citation**
-
-If you use this tool, please cite `Blankenberg D, Gordon A, Von Kuster G, Coraor N, Taylor J, Nekrutenko A; Galaxy Team. Manipulation of FASTQ data with Galaxy. Bioinformatics. 2010 Jul 15;26(14):1783-5. <http://www.ncbi.nlm.nih.gov/pubmed/20562416>`_
-
 
   </help>
+  
+  <citations>
+    <citation type="doi">10.1093/bioinformatics/btq281</citation>
+  </citations>
+  
 </tool>
--- a/tool_dependencies.xml	Mon Jan 27 09:27:22 2014 -0500
+++ b/tool_dependencies.xml	Wed Nov 11 12:43:11 2015 -0500
@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
   <package name="galaxy_sequence_utils" version="1.0.0">
-      <repository changeset_revision="0643676ad5f7" name="package_galaxy_utils_1_0" owner="devteam" prior_installation_required="False" toolshed="http://toolshed.g2.bx.psu.edu" />
+      <repository changeset_revision="0643676ad5f7" name="package_galaxy_utils_1_0" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>