Mercurial > repos > devteam > fastx_clipper
comparison fastx_clipper.xml @ 8:c60cf18ec2b0 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/fastx_toolkit/fastx_clipper commit 17bcf78f445b2e515122330caccb591d8de2a5b4
| author | iuc |
|---|---|
| date | Wed, 23 Apr 2025 05:20:21 +0000 |
| parents | 90858c306551 |
| children |
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| 7:90858c306551 | 8:c60cf18ec2b0 |
|---|---|
| 93 **In the above example:** | 93 **In the above example:** |
| 94 | 94 |
| 95 * Sequence no. 1 was discarded since it wasn't clipped (i.e. didn't contain the adapter sequence). (**Output** parameter). | 95 * Sequence no. 1 was discarded since it wasn't clipped (i.e. didn't contain the adapter sequence). (**Output** parameter). |
| 96 * Sequence no. 5 was discarded --- it's length (after clipping) was shorter than 15 nt (**Minimum Sequence Length** parameter). | 96 * Sequence no. 5 was discarded --- it's length (after clipping) was shorter than 15 nt (**Minimum Sequence Length** parameter). |
| 97 | 97 |
| 98 ------ | |
| 99 | |
| 100 This tool is based on `FASTX-toolkit`__ by Assaf Gordon. | |
| 101 | |
| 102 .. __: http://hannonlab.cshl.edu/fastx_toolkit/ | |
| 103 ]]></help> | 98 ]]></help> |
| 104 <expand macro="citations" /> | 99 <expand macro="citations" /> |
| 105 </tool> | 100 </tool> |