annotate tool_data_table_conf.xml.sample @ 11:e9ebed0c12f6
draft
Check exit code instead of stderr, since FreeBayes writes warnings there (e.g. "Could not find any mapped reads in target region chr1:955302..955952"). Also document change of available options in FreeBayes >= 0.9.9.
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soranzo |
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Mon, 17 Feb 2014 10:53:56 -0500 |
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61fe907fc37c |
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0
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1 <!-- Use the file tool_data_table_conf.xml.oldlocstyle if you don't want to update your loc files as changed in revision 4550:535d276c92bc-->
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2 <tables>
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3 <!-- Location of SAMTools indexes and other files -->
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4 <table name="sam_fa_indexes" comment_char="#">
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5 <columns>line_type, value, path</columns>
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6 <file path="tool-data/sam_fa_indices.loc" />
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7 </table>
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8 </tables>
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