view test-data/Homo_sapiens.GRCh37_19.71.gff3 @ 0:5f6e6582c01d draft

planemo upload commit a52cc16ed8d0d60e99742b55fccbdedcbb64b82c
author devteam
date Thu, 14 May 2015 13:08:14 -0400
parents
children 6ea09f60dee9
line wrap: on
line source

# gffread test-data/Homo_sapiens.GRCh37_19.71.gtf -o test-data/Homo_sapiens.GRCh37_19.71.gff3
##gff-version 3
19	snRNA	transcript	223158	223261	.	-	.	ID=ENST00000410397;geneID=ENSG00000222329;gene_name=U6
19	snRNA	exon	223158	223261	.	-	.	Parent=ENST00000410397
19	unprocessed_pseudogene	transcript	229640	230165	.	-	.	ID=ENST00000587910;geneID=ENSG00000267600;gene_name=AC098474.1
19	unprocessed_pseudogene	exon	229640	229709	.	-	.	Parent=ENST00000587910
19	unprocessed_pseudogene	exon	230084	230165	.	-	.	Parent=ENST00000587910
19	processed_pseudogene	transcript	239145	239247	.	-	.	ID=ENST00000588755;geneID=ENSG00000267305;gene_name=CTD-3113P16.7
19	processed_pseudogene	exon	239145	239247	.	-	.	Parent=ENST00000588755
19	processed_pseudogene	transcript	279495	280170	.	+	.	ID=ENST00000589981;geneID=ENSG00000267447;gene_name=VN2R11P
19	processed_pseudogene	exon	279495	280170	.	+	.	Parent=ENST00000589981
19	protein_coding	mRNA	281043	291386	.	-	.	ID=ENST00000269812;geneID=ENSG00000141934;gene_name=PPAP2C
19	protein_coding	exon	281043	281537	.	-	.	Parent=ENST00000269812
19	protein_coding	exon	282134	282310	.	-	.	Parent=ENST00000269812
19	protein_coding	exon	282752	282809	.	-	.	Parent=ENST00000269812
19	protein_coding	exon	287474	287751	.	-	.	Parent=ENST00000269812
19	protein_coding	exon	288020	288171	.	-	.	Parent=ENST00000269812
19	protein_coding	exon	291285	291386	.	-	.	Parent=ENST00000269812
19	protein_coding	CDS	281391	281537	.	-	0	Parent=ENST00000269812
19	protein_coding	CDS	282134	282310	.	-	0	Parent=ENST00000269812
19	protein_coding	CDS	282752	282809	.	-	1	Parent=ENST00000269812
19	protein_coding	CDS	287474	287751	.	-	0	Parent=ENST00000269812
19	protein_coding	CDS	288020	288171	.	-	2	Parent=ENST00000269812
19	protein_coding	CDS	291285	291336	.	-	0	Parent=ENST00000269812
19	protein_coding	mRNA	281345	291393	.	-	.	ID=ENST00000434325;geneID=ENSG00000141934;gene_name=PPAP2C
19	protein_coding	exon	281345	281537	.	-	.	Parent=ENST00000434325
19	protein_coding	exon	282134	282310	.	-	.	Parent=ENST00000434325
19	protein_coding	exon	282752	282809	.	-	.	Parent=ENST00000434325
19	protein_coding	exon	287474	287751	.	-	.	Parent=ENST00000434325
19	protein_coding	exon	288020	288171	.	-	.	Parent=ENST00000434325
19	protein_coding	exon	291326	291393	.	-	.	Parent=ENST00000434325
19	protein_coding	CDS	281391	281537	.	-	0	Parent=ENST00000434325
19	protein_coding	CDS	282134	282310	.	-	0	Parent=ENST00000434325
19	protein_coding	CDS	282752	282809	.	-	1	Parent=ENST00000434325
19	protein_coding	CDS	287474	287751	.	-	0	Parent=ENST00000434325
19	protein_coding	CDS	288020	288055	.	-	0	Parent=ENST00000434325
19	protein_coding	mRNA	281388	291200	.	-	.	ID=ENST00000327790;geneID=ENSG00000141934;gene_name=PPAP2C
19	protein_coding	exon	281388	281537	.	-	.	Parent=ENST00000327790
19	protein_coding	exon	282134	282310	.	-	.	Parent=ENST00000327790
19	protein_coding	exon	282752	282809	.	-	.	Parent=ENST00000327790
19	protein_coding	exon	287474	287751	.	-	.	Parent=ENST00000327790
19	protein_coding	exon	288020	288171	.	-	.	Parent=ENST00000327790
19	protein_coding	exon	290952	291200	.	-	.	Parent=ENST00000327790
19	protein_coding	CDS	281391	281537	.	-	0	Parent=ENST00000327790
19	protein_coding	CDS	282134	282310	.	-	0	Parent=ENST00000327790
19	protein_coding	CDS	282752	282809	.	-	1	Parent=ENST00000327790
19	protein_coding	CDS	287474	287751	.	-	0	Parent=ENST00000327790
19	protein_coding	CDS	288020	288171	.	-	2	Parent=ENST00000327790
19	protein_coding	CDS	290952	291066	.	-	0	Parent=ENST00000327790
19	protein_coding	mRNA	281991	287636	.	-	.	ID=ENST00000586998;geneID=ENSG00000141934;gene_name=PPAP2C
19	protein_coding	exon	281991	282310	.	-	.	Parent=ENST00000586998
19	protein_coding	exon	282752	282809	.	-	.	Parent=ENST00000586998
19	protein_coding	exon	287474	287636	.	-	.	Parent=ENST00000586998
19	protein_coding	CDS	282125	282310	.	-	0	Parent=ENST00000586998
19	protein_coding	CDS	282752	282809	.	-	1	Parent=ENST00000586998
19	protein_coding	CDS	287474	287636	.	-	2	Parent=ENST00000586998
19	retained_intron	transcript	287161	288530	.	-	.	ID=ENST00000589672;geneID=ENSG00000141934;gene_name=PPAP2C
19	retained_intron	exon	287161	287751	.	-	.	Parent=ENST00000589672
19	retained_intron	exon	288020	288530	.	-	.	Parent=ENST00000589672
19	protein_coding	mRNA	287474	291382	.	-	.	ID=ENST00000591572;geneID=ENSG00000141934;gene_name=PPAP2C
19	protein_coding	exon	287474	287751	.	-	.	Parent=ENST00000591572
19	protein_coding	exon	288020	288189	.	-	.	Parent=ENST00000591572
19	protein_coding	exon	291285	291382	.	-	.	Parent=ENST00000591572
19	protein_coding	CDS	287474	287751	.	-	0	Parent=ENST00000591572
19	protein_coding	CDS	288020	288189	.	-	2	Parent=ENST00000591572
19	protein_coding	CDS	291285	291336	.	-	0	Parent=ENST00000591572
19	antisense	transcript	305573	306467	.	+	.	ID=ENST00000591533;geneID=ENSG00000267124;gene_name=CTD-3113P16.5
19	antisense	exon	305573	305703	.	+	.	Parent=ENST00000591533
19	antisense	exon	306057	306467	.	+	.	Parent=ENST00000591533
19	protein_coding	mRNA	305575	344793	.	-	.	ID=ENST00000264819;geneID=ENSG00000105556;gene_name=MIER2
19	protein_coding	exon	305575	306711	.	-	.	Parent=ENST00000264819
19	protein_coding	exon	307119	307536	.	-	.	Parent=ENST00000264819
19	protein_coding	exon	308577	308665	.	-	.	Parent=ENST00000264819
19	protein_coding	exon	308801	308925	.	-	.	Parent=ENST00000264819
19	protein_coding	exon	311845	311939	.	-	.	Parent=ENST00000264819
19	protein_coding	exon	312191	312272	.	-	.	Parent=ENST00000264819
19	protein_coding	exon	313492	313643	.	-	.	Parent=ENST00000264819
19	protein_coding	exon	325635	325704	.	-	.	Parent=ENST00000264819
19	protein_coding	exon	326507	326598	.	-	.	Parent=ENST00000264819
19	protein_coding	exon	327133	327256	.	-	.	Parent=ENST00000264819
19	protein_coding	exon	327864	327989	.	-	.	Parent=ENST00000264819
19	protein_coding	exon	334400	334542	.	-	.	Parent=ENST00000264819
19	protein_coding	exon	336083	336173	.	-	.	Parent=ENST00000264819
19	protein_coding	exon	344774	344793	.	-	.	Parent=ENST00000264819
19	protein_coding	CDS	306693	306711	.	-	1	Parent=ENST00000264819
19	protein_coding	CDS	307119	307536	.	-	2	Parent=ENST00000264819
19	protein_coding	CDS	308577	308665	.	-	1	Parent=ENST00000264819
19	protein_coding	CDS	308801	308925	.	-	0	Parent=ENST00000264819
19	protein_coding	CDS	311845	311939	.	-	2	Parent=ENST00000264819
19	protein_coding	CDS	312191	312272	.	-	0	Parent=ENST00000264819
19	protein_coding	CDS	313492	313643	.	-	2	Parent=ENST00000264819
19	protein_coding	CDS	325635	325704	.	-	0	Parent=ENST00000264819
19	protein_coding	CDS	326507	326598	.	-	2	Parent=ENST00000264819
19	protein_coding	CDS	327133	327256	.	-	0	Parent=ENST00000264819
19	protein_coding	CDS	327864	327989	.	-	0	Parent=ENST00000264819
19	protein_coding	CDS	334400	334542	.	-	2	Parent=ENST00000264819
19	protein_coding	CDS	336083	336173	.	-	0	Parent=ENST00000264819
19	protein_coding	CDS	344774	344782	.	-	0	Parent=ENST00000264819
19	antisense	transcript	305579	325706	.	+	.	ID=ENST00000589092;geneID=ENSG00000267124;gene_name=CTD-3113P16.5
19	antisense	exon	305579	305934	.	+	.	Parent=ENST00000589092
19	antisense	exon	325624	325706	.	+	.	Parent=ENST00000589092
19	retained_intron	transcript	326607	336178	.	-	.	ID=ENST00000586994;geneID=ENSG00000105556;gene_name=MIER2
19	retained_intron	exon	326607	327256	.	-	.	Parent=ENST00000586994
19	retained_intron	exon	327864	327989	.	-	.	Parent=ENST00000586994
19	retained_intron	exon	334400	334542	.	-	.	Parent=ENST00000586994
19	retained_intron	exon	336083	336178	.	-	.	Parent=ENST00000586994
19	retained_intron	transcript	327864	340599	.	-	.	ID=ENST00000592722;geneID=ENSG00000105556;gene_name=MIER2
19	retained_intron	exon	327864	327989	.	-	.	Parent=ENST00000592722
19	retained_intron	exon	330264	330380	.	-	.	Parent=ENST00000592722
19	retained_intron	exon	334400	334542	.	-	.	Parent=ENST00000592722
19	retained_intron	exon	336083	336173	.	-	.	Parent=ENST00000592722
19	retained_intron	exon	340514	340599	.	-	.	Parent=ENST00000592722
19	retained_intron	transcript	334115	344798	.	-	.	ID=ENST00000587966;geneID=ENSG00000105556;gene_name=MIER2
19	retained_intron	exon	334115	334542	.	-	.	Parent=ENST00000587966
19	retained_intron	exon	344774	344798	.	-	.	Parent=ENST00000587966
19	protein_coding	mRNA	361750	376013	.	-	.	ID=ENST00000342640;geneID=ENSG00000105549;gene_name=THEG
19	protein_coding	exon	361750	362426	.	-	.	Parent=ENST00000342640
19	protein_coding	exon	367065	367224	.	-	.	Parent=ENST00000342640
19	protein_coding	exon	371205	371322	.	-	.	Parent=ENST00000342640
19	protein_coding	exon	372631	372700	.	-	.	Parent=ENST00000342640
19	protein_coding	exon	373470	373531	.	-	.	Parent=ENST00000342640
19	protein_coding	exon	373940	374011	.	-	.	Parent=ENST00000342640
19	protein_coding	exon	374299	374421	.	-	.	Parent=ENST00000342640
19	protein_coding	exon	375663	376013	.	-	.	Parent=ENST00000342640
19	protein_coding	CDS	362203	362426	.	-	2	Parent=ENST00000342640
19	protein_coding	CDS	367065	367224	.	-	0	Parent=ENST00000342640
19	protein_coding	CDS	371205	371322	.	-	1	Parent=ENST00000342640
19	protein_coding	CDS	372631	372700	.	-	2	Parent=ENST00000342640
19	protein_coding	CDS	373470	373531	.	-	1	Parent=ENST00000342640
19	protein_coding	CDS	373940	374011	.	-	1	Parent=ENST00000342640
19	protein_coding	CDS	374299	374421	.	-	1	Parent=ENST00000342640
19	protein_coding	CDS	375663	375970	.	-	0	Parent=ENST00000342640
19	retained_intron	transcript	362058	374620	.	-	.	ID=ENST00000530711;geneID=ENSG00000105549;gene_name=THEG
19	retained_intron	exon	362058	362426	.	-	.	Parent=ENST00000530711
19	retained_intron	exon	367065	367224	.	-	.	Parent=ENST00000530711
19	retained_intron	exon	374299	374620	.	-	.	Parent=ENST00000530711
19	protein_coding	mRNA	362200	375970	.	-	.	ID=ENST00000346878;geneID=ENSG00000105549;gene_name=THEG
19	protein_coding	exon	362200	362426	.	-	.	Parent=ENST00000346878
19	protein_coding	exon	367065	367224	.	-	.	Parent=ENST00000346878
19	protein_coding	exon	371205	371322	.	-	.	Parent=ENST00000346878
19	protein_coding	exon	372631	372700	.	-	.	Parent=ENST00000346878
19	protein_coding	exon	373470	373531	.	-	.	Parent=ENST00000346878
19	protein_coding	exon	374299	374421	.	-	.	Parent=ENST00000346878
19	protein_coding	exon	375663	375970	.	-	.	Parent=ENST00000346878
19	protein_coding	CDS	362203	362426	.	-	2	Parent=ENST00000346878
19	protein_coding	CDS	367065	367224	.	-	0	Parent=ENST00000346878
19	protein_coding	CDS	371205	371322	.	-	1	Parent=ENST00000346878
19	protein_coding	CDS	372631	372700	.	-	2	Parent=ENST00000346878
19	protein_coding	CDS	373470	373531	.	-	1	Parent=ENST00000346878
19	protein_coding	CDS	374299	374421	.	-	1	Parent=ENST00000346878
19	protein_coding	CDS	375663	375970	.	-	0	Parent=ENST00000346878
19	retained_intron	transcript	367202	374249	.	-	.	ID=ENST00000528213;geneID=ENSG00000105549;gene_name=THEG
19	retained_intron	exon	367202	367224	.	-	.	Parent=ENST00000528213
19	retained_intron	exon	371205	371322	.	-	.	Parent=ENST00000528213
19	retained_intron	exon	372631	372700	.	-	.	Parent=ENST00000528213
19	retained_intron	exon	373470	373531	.	-	.	Parent=ENST00000528213
19	retained_intron	exon	373940	374249	.	-	.	Parent=ENST00000528213
19	processed_transcript	transcript	397589	398941	.	+	.	ID=ENST00000591757;geneID=ENSG00000267443;gene_name=AC010641.1
19	processed_transcript	exon	397589	397633	.	+	.	Parent=ENST00000591757
19	processed_transcript	exon	398690	398941	.	+	.	Parent=ENST00000591757
19	protein_coding	mRNA	405445	409139	.	-	.	ID=ENST00000332235;geneID=ENSG00000183186;gene_name=C2CD4C
19	protein_coding	exon	405445	408401	.	-	.	Parent=ENST00000332235
19	protein_coding	exon	409006	409139	.	-	.	Parent=ENST00000332235
19	protein_coding	CDS	407099	408361	.	-	0	Parent=ENST00000332235
19	retained_intron	transcript	416583	419879	.	-	.	ID=ENST00000587423;geneID=ENSG00000129946;gene_name=SHC2
19	retained_intron	exon	416583	417322	.	-	.	Parent=ENST00000587423
19	retained_intron	exon	418923	419879	.	-	.	Parent=ENST00000587423
19	retained_intron	transcript	416583	422828	.	-	.	ID=ENST00000588376;geneID=ENSG00000129946;gene_name=SHC2
19	retained_intron	exon	416583	417322	.	-	.	Parent=ENST00000588376
19	retained_intron	exon	418923	419056	.	-	.	Parent=ENST00000588376
19	retained_intron	exon	422146	422828	.	-	.	Parent=ENST00000588376
19	protein_coding	mRNA	416593	460996	.	-	.	ID=ENST00000264554;geneID=ENSG00000129946;gene_name=SHC2
19	protein_coding	exon	416593	417322	.	-	.	Parent=ENST00000264554
19	protein_coding	exon	418923	419056	.	-	.	Parent=ENST00000264554
19	protein_coding	exon	422146	422456	.	-	.	Parent=ENST00000264554
19	protein_coding	exon	425097	425231	.	-	.	Parent=ENST00000264554
19	protein_coding	exon	430684	430747	.	-	.	Parent=ENST00000264554
19	protein_coding	exon	434709	434865	.	-	.	Parent=ENST00000264554
19	protein_coding	exon	436165	436291	.	-	.	Parent=ENST00000264554
19	protein_coding	exon	436380	436431	.	-	.	Parent=ENST00000264554
19	protein_coding	exon	436630	436683	.	-	.	Parent=ENST00000264554
19	protein_coding	exon	438718	438837	.	-	.	Parent=ENST00000264554
19	protein_coding	exon	438970	439030	.	-	.	Parent=ENST00000264554
19	protein_coding	exon	440862	440932	.	-	.	Parent=ENST00000264554
19	protein_coding	exon	460529	460996	.	-	.	Parent=ENST00000264554
19	protein_coding	CDS	418931	419056	.	-	0	Parent=ENST00000264554
19	protein_coding	CDS	422146	422456	.	-	2	Parent=ENST00000264554
19	protein_coding	CDS	425097	425231	.	-	2	Parent=ENST00000264554
19	protein_coding	CDS	430684	430747	.	-	0	Parent=ENST00000264554
19	protein_coding	CDS	434709	434865	.	-	1	Parent=ENST00000264554
19	protein_coding	CDS	436165	436291	.	-	2	Parent=ENST00000264554
19	protein_coding	CDS	436380	436431	.	-	0	Parent=ENST00000264554
19	protein_coding	CDS	436630	436683	.	-	0	Parent=ENST00000264554
19	protein_coding	CDS	438718	438837	.	-	0	Parent=ENST00000264554
19	protein_coding	CDS	438970	439030	.	-	1	Parent=ENST00000264554
19	protein_coding	CDS	440862	440932	.	-	0	Parent=ENST00000264554
19	protein_coding	CDS	460529	460996	.	-	0	Parent=ENST00000264554
19	retained_intron	transcript	416609	441384	.	-	.	ID=ENST00000589922;geneID=ENSG00000129946;gene_name=SHC2
19	retained_intron	exon	416609	417322	.	-	.	Parent=ENST00000589922
19	retained_intron	exon	418923	419056	.	-	.	Parent=ENST00000589922
19	retained_intron	exon	422146	422456	.	-	.	Parent=ENST00000589922
19	retained_intron	exon	425097	425231	.	-	.	Parent=ENST00000589922
19	retained_intron	exon	430684	430747	.	-	.	Parent=ENST00000589922
19	retained_intron	exon	434709	434865	.	-	.	Parent=ENST00000589922
19	retained_intron	exon	436165	436291	.	-	.	Parent=ENST00000589922
19	retained_intron	exon	436380	436683	.	-	.	Parent=ENST00000589922
19	retained_intron	exon	438718	438837	.	-	.	Parent=ENST00000589922
19	retained_intron	exon	438970	439030	.	-	.	Parent=ENST00000589922
19	retained_intron	exon	440862	441384	.	-	.	Parent=ENST00000589922
19	nonsense_mediated_decay	mRNA	417200	436258	.	-	.	ID=ENST00000590170;geneID=ENSG00000129946;gene_name=SHC2
19	nonsense_mediated_decay	exon	417200	417322	.	-	.	Parent=ENST00000590170
19	nonsense_mediated_decay	exon	418923	419056	.	-	.	Parent=ENST00000590170
19	nonsense_mediated_decay	exon	422146	422379	.	-	.	Parent=ENST00000590170
19	nonsense_mediated_decay	exon	430684	430747	.	-	.	Parent=ENST00000590170
19	nonsense_mediated_decay	exon	434709	434865	.	-	.	Parent=ENST00000590170
19	nonsense_mediated_decay	exon	436165	436258	.	-	.	Parent=ENST00000590170
19	nonsense_mediated_decay	CDS	434765	434865	.	-	2	Parent=ENST00000590170
19	nonsense_mediated_decay	CDS	436165	436258	.	-	0	Parent=ENST00000590170
19	processed_transcript	transcript	417200	436258	.	-	.	ID=ENST00000591948;geneID=ENSG00000129946;gene_name=SHC2
19	processed_transcript	exon	417200	417322	.	-	.	Parent=ENST00000591948
19	processed_transcript	exon	418923	419056	.	-	.	Parent=ENST00000591948
19	processed_transcript	exon	422146	422379	.	-	.	Parent=ENST00000591948
19	processed_transcript	exon	430684	430747	.	-	.	Parent=ENST00000591948
19	processed_transcript	exon	434709	434865	.	-	.	Parent=ENST00000591948
19	processed_transcript	exon	436165	436258	.	-	.	Parent=ENST00000591948
19	nonsense_mediated_decay	mRNA	434702	460571	.	-	.	ID=ENST00000590222;geneID=ENSG00000129946;gene_name=SHC2
19	nonsense_mediated_decay	exon	434702	434865	.	-	.	Parent=ENST00000590222
19	nonsense_mediated_decay	exon	436165	436291	.	-	.	Parent=ENST00000590222
19	nonsense_mediated_decay	exon	436380	436431	.	-	.	Parent=ENST00000590222
19	nonsense_mediated_decay	exon	436630	436683	.	-	.	Parent=ENST00000590222
19	nonsense_mediated_decay	exon	438718	438837	.	-	.	Parent=ENST00000590222
19	nonsense_mediated_decay	exon	438970	439030	.	-	.	Parent=ENST00000590222
19	nonsense_mediated_decay	exon	439233	439491	.	-	.	Parent=ENST00000590222
19	nonsense_mediated_decay	exon	440862	440932	.	-	.	Parent=ENST00000590222
19	nonsense_mediated_decay	exon	460529	460571	.	-	.	Parent=ENST00000590222
19	nonsense_mediated_decay	CDS	439401	439491	.	-	1	Parent=ENST00000590222
19	nonsense_mediated_decay	CDS	440862	440932	.	-	0	Parent=ENST00000590222
19	nonsense_mediated_decay	CDS	460529	460571	.	-	1	Parent=ENST00000590222
19	retained_intron	transcript	435771	436534	.	-	.	ID=ENST00000591388;geneID=ENSG00000129946;gene_name=SHC2
19	retained_intron	exon	435771	435961	.	-	.	Parent=ENST00000591388
19	retained_intron	exon	436165	436291	.	-	.	Parent=ENST00000591388
19	retained_intron	exon	436380	436534	.	-	.	Parent=ENST00000591388
19	processed_transcript	transcript	435779	439031	.	-	.	ID=ENST00000590113;geneID=ENSG00000129946;gene_name=SHC2
19	processed_transcript	exon	435779	435961	.	-	.	Parent=ENST00000590113
19	processed_transcript	exon	436165	436291	.	-	.	Parent=ENST00000590113
19	processed_transcript	exon	436380	436431	.	-	.	Parent=ENST00000590113
19	processed_transcript	exon	436630	436683	.	-	.	Parent=ENST00000590113
19	processed_transcript	exon	438718	438837	.	-	.	Parent=ENST00000590113
19	processed_transcript	exon	438970	439031	.	-	.	Parent=ENST00000590113
19	rRNA	transcript	453134	453245	.	+	.	ID=ENST00000516730;geneID=ENSG00000252539;gene_name=RNA5SP462
19	rRNA	exon	453134	453245	.	+	.	Parent=ENST00000516730
19	protein_coding	mRNA	463346	474983	.	-	.	ID=ENST00000315489;geneID=ENSG00000181781;gene_name=ODF3L2
19	protein_coding	exon	463346	464364	.	-	.	Parent=ENST00000315489
19	protein_coding	exon	467649	467762	.	-	.	Parent=ENST00000315489
19	protein_coding	exon	472394	472501	.	-	.	Parent=ENST00000315489
19	protein_coding	exon	474621	474983	.	-	.	Parent=ENST00000315489
19	protein_coding	CDS	463847	464364	.	-	2	Parent=ENST00000315489
19	protein_coding	CDS	467649	467762	.	-	2	Parent=ENST00000315489
19	protein_coding	CDS	472394	472501	.	-	2	Parent=ENST00000315489
19	protein_coding	CDS	474621	474747	.	-	0	Parent=ENST00000315489
19	protein_coding	mRNA	463467	474880	.	-	.	ID=ENST00000382696;geneID=ENSG00000181781;gene_name=ODF3L2
19	protein_coding	exon	463467	464364	.	-	.	Parent=ENST00000382696
19	protein_coding	exon	467649	467762	.	-	.	Parent=ENST00000382696
19	protein_coding	exon	474621	474880	.	-	.	Parent=ENST00000382696
19	protein_coding	CDS	463847	464364	.	-	2	Parent=ENST00000382696
19	protein_coding	CDS	467649	467762	.	-	2	Parent=ENST00000382696
19	protein_coding	CDS	474621	474747	.	-	0	Parent=ENST00000382696
19	retained_intron	transcript	464146	472631	.	-	.	ID=ENST00000591681;geneID=ENSG00000181781;gene_name=ODF3L2
19	retained_intron	exon	464146	464364	.	-	.	Parent=ENST00000591681
19	retained_intron	exon	467649	467762	.	-	.	Parent=ENST00000591681
19	retained_intron	exon	472394	472631	.	-	.	Parent=ENST00000591681
19	processed_transcript	transcript	489176	505342	.	+	.	ID=ENST00000587541;geneID=ENSG00000099866;gene_name=MADCAM1
19	processed_transcript	exon	489176	490039	.	+	.	Parent=ENST00000587541
19	processed_transcript	exon	501669	501929	.	+	.	Parent=ENST00000587541
19	processed_transcript	exon	504745	505342	.	+	.	Parent=ENST00000587541
19	antisense	transcript	490046	507813	.	-	.	ID=ENST00000592413;geneID=ENSG00000266933;gene_name=AC005775.2
19	antisense	exon	490046	490353	.	-	.	Parent=ENST00000592413
19	antisense	exon	501541	501624	.	-	.	Parent=ENST00000592413
19	antisense	exon	507376	507813	.	-	.	Parent=ENST00000592413
19	protein_coding	mRNA	496454	505207	.	+	.	ID=ENST00000346144;geneID=ENSG00000099866;gene_name=MADCAM1
19	protein_coding	exon	496454	496551	.	+	.	Parent=ENST00000346144
19	protein_coding	exon	497833	498117	.	+	.	Parent=ENST00000346144
19	protein_coding	exon	498496	498825	.	+	.	Parent=ENST00000346144
19	protein_coding	exon	504745	505207	.	+	.	Parent=ENST00000346144
19	protein_coding	CDS	496500	496551	.	+	0	Parent=ENST00000346144
19	protein_coding	CDS	497833	498117	.	+	2	Parent=ENST00000346144
19	protein_coding	CDS	498496	498825	.	+	2	Parent=ENST00000346144
19	protein_coding	CDS	504745	504963	.	+	2	Parent=ENST00000346144
19	protein_coding	mRNA	496454	505347	.	+	.	ID=ENST00000215637;geneID=ENSG00000099866;gene_name=MADCAM1
19	protein_coding	exon	496454	496551	.	+	.	Parent=ENST00000215637
19	protein_coding	exon	497833	498117	.	+	.	Parent=ENST00000215637
19	protein_coding	exon	498496	498825	.	+	.	Parent=ENST00000215637
19	protein_coding	exon	501669	501929	.	+	.	Parent=ENST00000215637
19	protein_coding	exon	504745	505347	.	+	.	Parent=ENST00000215637
19	protein_coding	CDS	496500	496551	.	+	0	Parent=ENST00000215637
19	protein_coding	CDS	497833	498117	.	+	2	Parent=ENST00000215637
19	protein_coding	CDS	498496	498825	.	+	2	Parent=ENST00000215637
19	protein_coding	CDS	501669	501929	.	+	2	Parent=ENST00000215637
19	protein_coding	CDS	504745	504963	.	+	2	Parent=ENST00000215637
19	protein_coding	mRNA	496500	504965	.	+	.	ID=ENST00000382683;geneID=ENSG00000099866;gene_name=MADCAM1
19	protein_coding	exon	496500	496551	.	+	.	Parent=ENST00000382683
19	protein_coding	exon	498496	498825	.	+	.	Parent=ENST00000382683
19	protein_coding	exon	504745	504965	.	+	.	Parent=ENST00000382683
19	protein_coding	CDS	496500	496551	.	+	0	Parent=ENST00000382683
19	protein_coding	CDS	498496	498825	.	+	2	Parent=ENST00000382683
19	protein_coding	CDS	504745	504963	.	+	2	Parent=ENST00000382683
19	protein_coding	mRNA	507299	519654	.	+	.	ID=ENST00000359315;geneID=ENSG00000141933;gene_name=TPGS1
19	protein_coding	exon	507299	507844	.	+	.	Parent=ENST00000359315
19	protein_coding	exon	518889	519654	.	+	.	Parent=ENST00000359315
19	protein_coding	CDS	507507	507844	.	+	0	Parent=ENST00000359315
19	protein_coding	CDS	518889	519421	.	+	1	Parent=ENST00000359315
19	retained_intron	transcript	507500	510372	.	+	.	ID=ENST00000588278;geneID=ENSG00000141933;gene_name=TPGS1
19	retained_intron	exon	507500	510372	.	+	.	Parent=ENST00000588278