Mercurial > repos > devteam > hisat

annotate hisat_macros.xml @ 1:8bb3efa0dae8 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 8000b1dd0d6b336707cf84867d11f690f6a26f5c
author devteam
date Tue, 21 Jul 2015 15:33:12 -0400
parents e3fe061597ac
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
1 <?xml version="1.0"?>
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
2 <macros>
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
3 <xml name="function">
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
4 <param type="select" label="Function type" name="function_type" display="radio">
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
5 <yield />
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
6 <option value="C">Constant</option>
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
7 <option value="L">Linear [f(x) = y + z * x]</option>
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
8 <option value="S">Square root [f(x) = y + z * x²]</option>
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
9 <option value="G">Natural logarithm [f(x) = y + z * log(x)]</option>
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
10 </param>
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
11 <param type="integer" label="Constant term (y)" name="constant_term" value="0" />
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
12 <param type="integer" label="Coefficient (z)" name="coefficient_term" value="0" />
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
13 </xml>
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
14 <xml name="single_paired_selector">
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
15 <param label="Single end or paired reads?" name="paired_selector" type="select">
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
16 <option value="paired_collection">Single collection of paired reads</option>
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
17 <option value="paired_list">List of paired reads</option>
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
18 <option value="paired">Reads are paired</option>
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
19 <option value="single">Reads are unpaired</option>
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
20 </param>
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
21 </xml>
e3fe061597ac planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
parents:
diff changeset
22 </macros>