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comparison histogram2.xml @ 3:d0b9dd19e919 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/histogram commit e67a9cc9a7b253ba46df745f5fd6bf26282e97cd
author devteam
date Fri, 07 Feb 2025 21:26:17 +0000
parents 6f134426c2b0
children
comparison
equal deleted inserted replaced
2:6f134426c2b0 3:d0b9dd19e919
1 <tool id="histogram_rpy" name="Histogram" version="1.0.4"> 1 <tool id="histogram_rpy" name="Histogram" version="1.0.5">
2 <description>of a numeric column</description> 2 <description>of a numeric column</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="3.3.2">rpy2</requirement> 4 <requirement type="package" version="3.3.2">rpy2</requirement>
5 <requirement type="package" version="3.6.0">R</requirement> 5 <requirement type="package" version="3.6.0">R</requirement>
6 </requirements> 6 </requirements>
15 $density 15 $density
16 $frequency 16 $frequency
17 </command> 17 </command>
18 <inputs> 18 <inputs>
19 <param name="input" type="data" format="tabular" label="Dataset" help="Dataset missing? See TIP below"/> 19 <param name="input" type="data" format="tabular" label="Dataset" help="Dataset missing? See TIP below"/>
20 <param name="numerical_column" type="data_column" data_ref="input" numerical="True" label="Numerical column for x axis" /> 20 <conditional name="cols">
21 <param name="header" type="select" label="Does the table have a header?" refresh_on_change="true" help="If the table has a header, the column can be selected using the name instead of the index.">
22 <option value="yes">yes</option>
23 <option value="no">no</option>
24 </param>
25 <when value="yes">
26 <param name="numerical_column" type="data_column" data_ref="input" numerical="True" use_header_names="true" label="Numerical column for x axis" />
27 </when>
28 <when value="no">
29 <param name="numerical_column" type="data_column" data_ref="input" numerical="True" label="Numerical column for x axis" />
30 </when>
31 </conditional>
21 <param name="breaks" type="integer" value="0" label="Number of breaks (bars)"/> 32 <param name="breaks" type="integer" value="0" label="Number of breaks (bars)"/>
22 <param name="title" type="text" value="Histogram" label="Plot title"/> 33 <param name="title" type="text" value="Histogram" label="Plot title"/>
23 <param name="xlab" type="text" value="V1" label="Label for x axis"/> 34 <param name="xlab" type="text" value="V1" label="Label for x axis"/>
24 <param name="density" type="boolean" checked="yes" label="Include smoothed density"/> 35 <param name="density" type="boolean" checked="yes" label="Include smoothed density"/>
25 <param name="frequency" type="boolean" checked="no" label="Plot as frequency (counts)"/> 36 <param name="frequency" type="boolean" checked="no" label="Plot as frequency (counts)"/>
82 - Create a histogram on column 2 of the above dataset. 93 - Create a histogram on column 2 of the above dataset.
83 94
84 .. image:: histogram2.png 95 .. image:: histogram2.png
85 96
86 </help> 97 </help>
98 <citations>
99 <citation type="doi">10.1145/3386334</citation>
100 </citations>
87 </tool> 101 </tool>