Mercurial > repos > devteam > kraken
diff tool-data/kraken_databases.loc.sample @ 8:8ba2174315aa draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tool_collections/kraken/kraken/ commit 87dfa1af2f1dd57ffc7290b66218a127cec6757f
| author | iuc |
|---|---|
| date | Mon, 14 Jan 2019 16:48:56 -0500 |
| parents | 0f17a8816b28 |
| children |
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--- a/tool-data/kraken_databases.loc.sample Thu Sep 13 09:44:31 2018 -0400 +++ b/tool-data/kraken_databases.loc.sample Mon Jan 14 16:48:56 2019 -0500 @@ -0,0 +1,18 @@ +# Expect three columns, tab separated, as follows: +# - value (Galaxy records this in the Galaxy DB) +# - name (Galaxy shows this in the UI) +# - path (folder name containing the Kraken DB) +# +# e.g. +# plants2018<tab>Plant genomes (2018)<tab>/path/to/krakenDB/plants_2018 +# +# For backward compatibility the Kraken wrapper also accepts: +# - value (Galaxy records this in the Galaxy DB) +# - name (Final part of folder name, Galaxy shows this in the UI) +# - path (Parent folder name, where $path/$name contains the Kraken DB) +# +# e.g. +# plants2018<tab>plants_2018<tab>/path/to/krakenDB +# +# Please avoid this legacy usage, as not all tools using +# the kraken_databases.loc file will understand it.