diff tool-data/kraken_databases.loc.sample @ 8:8ba2174315aa draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tool_collections/kraken/kraken/ commit 87dfa1af2f1dd57ffc7290b66218a127cec6757f
author iuc
date Mon, 14 Jan 2019 16:48:56 -0500
parents 0f17a8816b28
children
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--- a/tool-data/kraken_databases.loc.sample	Thu Sep 13 09:44:31 2018 -0400
+++ b/tool-data/kraken_databases.loc.sample	Mon Jan 14 16:48:56 2019 -0500
@@ -0,0 +1,18 @@
+# Expect three columns, tab separated, as follows:
+# - value (Galaxy records this in the Galaxy DB)
+# - name (Galaxy shows this in the UI)
+# - path (folder name containing the Kraken DB)
+#
+# e.g.
+# plants2018<tab>Plant genomes (2018)<tab>/path/to/krakenDB/plants_2018
+#
+# For backward compatibility the Kraken wrapper also accepts:
+# - value (Galaxy records this in the Galaxy DB)
+# - name (Final part of folder name, Galaxy shows this in the UI)
+# - path (Parent folder name, where $path/$name contains the Kraken DB)
+#
+# e.g.
+# plants2018<tab>plants_2018<tab>/path/to/krakenDB
+#
+# Please avoid this legacy usage, as not all tools using
+# the kraken_databases.loc file will understand it.