Mercurial > repos > devteam > lastz
diff lastz_d.xml @ 13:bf107d23242b draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/lastz commit 04ec440aef00477a46c89fdb9b74e9bade5ffd94
| author | iuc |
|---|---|
| date | Thu, 05 Feb 2026 12:52:06 +0000 |
| parents | 37b497aa133f |
| children |
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--- a/lastz_d.xml Thu Jan 22 18:28:16 2026 +0000 +++ b/lastz_d.xml Thu Feb 05 12:52:06 2026 +0000 @@ -1,13 +1,10 @@ -<tool id="lastz_d_wrapper" name="LASTZ_D" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@"> - <description>: estimate substitution scores matrix</description> +<tool id="lastz_d_wrapper" name="LASTZ_D" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@"> + <description>estimate substitution scores matrix</description> <macros> <import>lastz_macros.xml</import> </macros> <expand macro="bio_tools"/> - <requirements> - <requirement type="package" version="@TOOL_VERSION@">lastz</requirement> - <requirement type="package" version="1.0.8">bzip2</requirement> - </requirements> + <expand macro="requirements"/> <command detect_errors="exit_code"><![CDATA[ lastz_D @TARGET_INPUT_COMMAND_LINE@ @@ -30,14 +27,18 @@ </outputs> <tests> <test> - <param name="ref_source" value="history" /> - <param name="target" value="chrM_human.fa" /> + <conditional name="source"> + <param name="ref_source" value="history" /> + <param name="target" value="chrM_human.fa" /> + </conditional> <param name="query" value="chrM_mouse.fa" /> <output name="output" value="lastz_d_test1.out" /> </test> <test> - <param name="ref_source" value="history" /> - <param name="target" value="chrM_human.fa" /> + <conditional name="source"> + <param name="ref_source" value="history" /> + <param name="target" value="chrM_human.fa" /> + </conditional> <param name="query" value="chrM_mouse.fa" /> <param name="score_file" value="lastz_d_ctrl_file.txt" /> <output name="output" value="lastz_d_test2.out" />