0
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1 <?xml version="1.0"?>
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2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "NCBI_BlastOutput.dtd">
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3 <BlastOutput>
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4 <BlastOutput_program>tblastn</BlastOutput_program>
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5 <BlastOutput_version>TBLASTN 2.2.25+</BlastOutput_version>
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6 <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
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7 <BlastOutput_db></BlastOutput_db>
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8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
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9 <BlastOutput_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</BlastOutput_query-def>
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10 <BlastOutput_query-len>406</BlastOutput_query-len>
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11 <BlastOutput_param>
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12 <Parameters>
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13 <Parameters_matrix>BLOSUM80</Parameters_matrix>
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14 <Parameters_expect>1e-10</Parameters_expect>
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15 <Parameters_gap-open>10</Parameters_gap-open>
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16 <Parameters_gap-extend>1</Parameters_gap-extend>
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17 <Parameters_filter>F</Parameters_filter>
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18 </Parameters>
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19 </BlastOutput_param>
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20 <BlastOutput_iterations>
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21 <Iteration>
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22 <Iteration_iter-num>1</Iteration_iter-num>
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23 <Iteration_query-ID>Query_1</Iteration_query-ID>
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24 <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
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25 <Iteration_query-len>406</Iteration_query-len>
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26 <Iteration_hits></Iteration_hits>
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27 <Iteration_stat>
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28 <Statistics>
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29 <Statistics_db-num>0</Statistics_db-num>
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30 <Statistics_db-len>0</Statistics_db-len>
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31 <Statistics_hsp-len>19</Statistics_hsp-len>
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32 <Statistics_eff-space>127710</Statistics_eff-space>
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33 <Statistics_kappa>0.071</Statistics_kappa>
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34 <Statistics_lambda>0.299</Statistics_lambda>
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35 <Statistics_entropy>0.27</Statistics_entropy>
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36 </Statistics>
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37 </Iteration_stat>
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38 <Iteration_message>No hits found</Iteration_message>
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39 </Iteration>
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40 <Iteration>
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41 <Iteration_iter-num>2</Iteration_iter-num>
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42 <Iteration_query-ID>Query_1</Iteration_query-ID>
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43 <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
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44 <Iteration_query-len>406</Iteration_query-len>
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45 <Iteration_hits></Iteration_hits>
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46 <Iteration_stat>
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47 <Statistics>
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48 <Statistics_db-num>0</Statistics_db-num>
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49 <Statistics_db-len>0</Statistics_db-len>
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50 <Statistics_hsp-len>19</Statistics_hsp-len>
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51 <Statistics_eff-space>127710</Statistics_eff-space>
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52 <Statistics_kappa>0.071</Statistics_kappa>
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53 <Statistics_lambda>0.299</Statistics_lambda>
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54 <Statistics_entropy>0.27</Statistics_entropy>
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55 </Statistics>
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56 </Iteration_stat>
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57 <Iteration_message>No hits found</Iteration_message>
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58 </Iteration>
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59 <Iteration>
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60 <Iteration_iter-num>3</Iteration_iter-num>
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61 <Iteration_query-ID>Query_1</Iteration_query-ID>
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62 <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
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63 <Iteration_query-len>406</Iteration_query-len>
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64 <Iteration_hits></Iteration_hits>
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65 <Iteration_stat>
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66 <Statistics>
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67 <Statistics_db-num>0</Statistics_db-num>
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68 <Statistics_db-len>0</Statistics_db-len>
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69 <Statistics_hsp-len>19</Statistics_hsp-len>
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70 <Statistics_eff-space>127710</Statistics_eff-space>
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71 <Statistics_kappa>0.071</Statistics_kappa>
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72 <Statistics_lambda>0.299</Statistics_lambda>
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73 <Statistics_entropy>0.27</Statistics_entropy>
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74 </Statistics>
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75 </Iteration_stat>
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76 <Iteration_message>No hits found</Iteration_message>
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77 </Iteration>
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78 <Iteration>
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79 <Iteration_iter-num>4</Iteration_iter-num>
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80 <Iteration_query-ID>Query_1</Iteration_query-ID>
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81 <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
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82 <Iteration_query-len>406</Iteration_query-len>
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83 <Iteration_hits></Iteration_hits>
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84 <Iteration_stat>
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85 <Statistics>
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86 <Statistics_db-num>0</Statistics_db-num>
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87 <Statistics_db-len>0</Statistics_db-len>
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88 <Statistics_hsp-len>19</Statistics_hsp-len>
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89 <Statistics_eff-space>127710</Statistics_eff-space>
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90 <Statistics_kappa>0.071</Statistics_kappa>
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91 <Statistics_lambda>0.299</Statistics_lambda>
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92 <Statistics_entropy>0.27</Statistics_entropy>
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93 </Statistics>
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94 </Iteration_stat>
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95 <Iteration_message>No hits found</Iteration_message>
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96 </Iteration>
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97 <Iteration>
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98 <Iteration_iter-num>5</Iteration_iter-num>
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99 <Iteration_query-ID>Query_1</Iteration_query-ID>
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100 <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
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101 <Iteration_query-len>406</Iteration_query-len>
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102 <Iteration_hits></Iteration_hits>
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103 <Iteration_stat>
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104 <Statistics>
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105 <Statistics_db-num>0</Statistics_db-num>
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106 <Statistics_db-len>0</Statistics_db-len>
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107 <Statistics_hsp-len>19</Statistics_hsp-len>
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108 <Statistics_eff-space>127710</Statistics_eff-space>
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109 <Statistics_kappa>0.071</Statistics_kappa>
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110 <Statistics_lambda>0.299</Statistics_lambda>
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111 <Statistics_entropy>0.27</Statistics_entropy>
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112 </Statistics>
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113 </Iteration_stat>
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114 <Iteration_message>No hits found</Iteration_message>
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115 </Iteration>
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116 <Iteration>
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117 <Iteration_iter-num>6</Iteration_iter-num>
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118 <Iteration_query-ID>Query_1</Iteration_query-ID>
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119 <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
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120 <Iteration_query-len>406</Iteration_query-len>
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121 <Iteration_hits></Iteration_hits>
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122 <Iteration_stat>
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123 <Statistics>
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124 <Statistics_db-num>0</Statistics_db-num>
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125 <Statistics_db-len>0</Statistics_db-len>
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126 <Statistics_hsp-len>19</Statistics_hsp-len>
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127 <Statistics_eff-space>127710</Statistics_eff-space>
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128 <Statistics_kappa>0.071</Statistics_kappa>
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129 <Statistics_lambda>0.299</Statistics_lambda>
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130 <Statistics_entropy>0.27</Statistics_entropy>
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131 </Statistics>
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132 </Iteration_stat>
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133 <Iteration_message>No hits found</Iteration_message>
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134 </Iteration>
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135 <Iteration>
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136 <Iteration_iter-num>7</Iteration_iter-num>
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137 <Iteration_query-ID>Query_2</Iteration_query-ID>
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138 <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
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139 <Iteration_query-len>1161</Iteration_query-len>
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140 <Iteration_hits></Iteration_hits>
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141 <Iteration_stat>
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142 <Statistics>
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143 <Statistics_db-num>0</Statistics_db-num>
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144 <Statistics_db-len>0</Statistics_db-len>
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145 <Statistics_hsp-len>23</Statistics_hsp-len>
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146 <Statistics_eff-space>370988</Statistics_eff-space>
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147 <Statistics_kappa>0.071</Statistics_kappa>
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148 <Statistics_lambda>0.299</Statistics_lambda>
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149 <Statistics_entropy>0.27</Statistics_entropy>
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150 </Statistics>
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151 </Iteration_stat>
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152 <Iteration_message>No hits found</Iteration_message>
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153 </Iteration>
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154 <Iteration>
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155 <Iteration_iter-num>8</Iteration_iter-num>
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156 <Iteration_query-ID>Query_2</Iteration_query-ID>
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157 <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
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158 <Iteration_query-len>1161</Iteration_query-len>
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159 <Iteration_hits></Iteration_hits>
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160 <Iteration_stat>
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161 <Statistics>
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162 <Statistics_db-num>0</Statistics_db-num>
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163 <Statistics_db-len>0</Statistics_db-len>
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164 <Statistics_hsp-len>23</Statistics_hsp-len>
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165 <Statistics_eff-space>370988</Statistics_eff-space>
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166 <Statistics_kappa>0.071</Statistics_kappa>
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167 <Statistics_lambda>0.299</Statistics_lambda>
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168 <Statistics_entropy>0.27</Statistics_entropy>
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169 </Statistics>
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170 </Iteration_stat>
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171 <Iteration_message>No hits found</Iteration_message>
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172 </Iteration>
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173 <Iteration>
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174 <Iteration_iter-num>9</Iteration_iter-num>
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175 <Iteration_query-ID>Query_2</Iteration_query-ID>
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176 <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
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177 <Iteration_query-len>1161</Iteration_query-len>
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178 <Iteration_hits></Iteration_hits>
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179 <Iteration_stat>
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180 <Statistics>
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181 <Statistics_db-num>0</Statistics_db-num>
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182 <Statistics_db-len>0</Statistics_db-len>
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183 <Statistics_hsp-len>23</Statistics_hsp-len>
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184 <Statistics_eff-space>370988</Statistics_eff-space>
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185 <Statistics_kappa>0.071</Statistics_kappa>
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186 <Statistics_lambda>0.299</Statistics_lambda>
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187 <Statistics_entropy>0.27</Statistics_entropy>
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188 </Statistics>
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189 </Iteration_stat>
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190 <Iteration_message>No hits found</Iteration_message>
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191 </Iteration>
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192 <Iteration>
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193 <Iteration_iter-num>10</Iteration_iter-num>
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194 <Iteration_query-ID>Query_2</Iteration_query-ID>
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195 <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
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196 <Iteration_query-len>1161</Iteration_query-len>
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197 <Iteration_hits></Iteration_hits>
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198 <Iteration_stat>
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199 <Statistics>
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200 <Statistics_db-num>0</Statistics_db-num>
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|
201 <Statistics_db-len>0</Statistics_db-len>
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|
202 <Statistics_hsp-len>23</Statistics_hsp-len>
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|
203 <Statistics_eff-space>370988</Statistics_eff-space>
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|
204 <Statistics_kappa>0.071</Statistics_kappa>
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|
205 <Statistics_lambda>0.299</Statistics_lambda>
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206 <Statistics_entropy>0.27</Statistics_entropy>
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207 </Statistics>
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208 </Iteration_stat>
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209 <Iteration_message>No hits found</Iteration_message>
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210 </Iteration>
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211 <Iteration>
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212 <Iteration_iter-num>11</Iteration_iter-num>
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213 <Iteration_query-ID>Query_2</Iteration_query-ID>
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214 <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
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215 <Iteration_query-len>1161</Iteration_query-len>
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|
216 <Iteration_hits></Iteration_hits>
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|
217 <Iteration_stat>
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|
218 <Statistics>
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|
219 <Statistics_db-num>0</Statistics_db-num>
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|
220 <Statistics_db-len>0</Statistics_db-len>
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|
221 <Statistics_hsp-len>23</Statistics_hsp-len>
|
|
222 <Statistics_eff-space>370988</Statistics_eff-space>
|
|
223 <Statistics_kappa>0.071</Statistics_kappa>
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|
224 <Statistics_lambda>0.299</Statistics_lambda>
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|
225 <Statistics_entropy>0.27</Statistics_entropy>
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|
226 </Statistics>
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227 </Iteration_stat>
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228 <Iteration_message>No hits found</Iteration_message>
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229 </Iteration>
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230 <Iteration>
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231 <Iteration_iter-num>12</Iteration_iter-num>
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232 <Iteration_query-ID>Query_2</Iteration_query-ID>
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233 <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
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234 <Iteration_query-len>1161</Iteration_query-len>
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|
235 <Iteration_hits></Iteration_hits>
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|
236 <Iteration_stat>
|
|
237 <Statistics>
|
|
238 <Statistics_db-num>0</Statistics_db-num>
|
|
239 <Statistics_db-len>0</Statistics_db-len>
|
|
240 <Statistics_hsp-len>23</Statistics_hsp-len>
|
|
241 <Statistics_eff-space>370988</Statistics_eff-space>
|
|
242 <Statistics_kappa>0.071</Statistics_kappa>
|
|
243 <Statistics_lambda>0.299</Statistics_lambda>
|
|
244 <Statistics_entropy>0.27</Statistics_entropy>
|
|
245 </Statistics>
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|
246 </Iteration_stat>
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247 <Iteration_message>No hits found</Iteration_message>
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248 </Iteration>
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249 <Iteration>
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250 <Iteration_iter-num>13</Iteration_iter-num>
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251 <Iteration_query-ID>Query_3</Iteration_query-ID>
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252 <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
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253 <Iteration_query-len>1382</Iteration_query-len>
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254 <Iteration_hits></Iteration_hits>
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|
255 <Iteration_stat>
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|
256 <Statistics>
|
|
257 <Statistics_db-num>0</Statistics_db-num>
|
|
258 <Statistics_db-len>0</Statistics_db-len>
|
|
259 <Statistics_hsp-len>24</Statistics_hsp-len>
|
|
260 <Statistics_eff-space>441350</Statistics_eff-space>
|
|
261 <Statistics_kappa>0.071</Statistics_kappa>
|
|
262 <Statistics_lambda>0.299</Statistics_lambda>
|
|
263 <Statistics_entropy>0.27</Statistics_entropy>
|
|
264 </Statistics>
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|
265 </Iteration_stat>
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|
266 <Iteration_message>No hits found</Iteration_message>
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267 </Iteration>
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268 <Iteration>
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269 <Iteration_iter-num>14</Iteration_iter-num>
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270 <Iteration_query-ID>Query_3</Iteration_query-ID>
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271 <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
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|
272 <Iteration_query-len>1382</Iteration_query-len>
|
|
273 <Iteration_hits></Iteration_hits>
|
|
274 <Iteration_stat>
|
|
275 <Statistics>
|
|
276 <Statistics_db-num>0</Statistics_db-num>
|
|
277 <Statistics_db-len>0</Statistics_db-len>
|
|
278 <Statistics_hsp-len>24</Statistics_hsp-len>
|
|
279 <Statistics_eff-space>441350</Statistics_eff-space>
|
|
280 <Statistics_kappa>0.071</Statistics_kappa>
|
|
281 <Statistics_lambda>0.299</Statistics_lambda>
|
|
282 <Statistics_entropy>0.27</Statistics_entropy>
|
|
283 </Statistics>
|
|
284 </Iteration_stat>
|
|
285 <Iteration_message>No hits found</Iteration_message>
|
|
286 </Iteration>
|
|
287 <Iteration>
|
|
288 <Iteration_iter-num>15</Iteration_iter-num>
|
|
289 <Iteration_query-ID>Query_3</Iteration_query-ID>
|
|
290 <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
|
|
291 <Iteration_query-len>1382</Iteration_query-len>
|
|
292 <Iteration_hits></Iteration_hits>
|
|
293 <Iteration_stat>
|
|
294 <Statistics>
|
|
295 <Statistics_db-num>0</Statistics_db-num>
|
|
296 <Statistics_db-len>0</Statistics_db-len>
|
|
297 <Statistics_hsp-len>24</Statistics_hsp-len>
|
|
298 <Statistics_eff-space>441350</Statistics_eff-space>
|
|
299 <Statistics_kappa>0.071</Statistics_kappa>
|
|
300 <Statistics_lambda>0.299</Statistics_lambda>
|
|
301 <Statistics_entropy>0.27</Statistics_entropy>
|
|
302 </Statistics>
|
|
303 </Iteration_stat>
|
|
304 <Iteration_message>No hits found</Iteration_message>
|
|
305 </Iteration>
|
|
306 <Iteration>
|
|
307 <Iteration_iter-num>16</Iteration_iter-num>
|
|
308 <Iteration_query-ID>Query_3</Iteration_query-ID>
|
|
309 <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
|
|
310 <Iteration_query-len>1382</Iteration_query-len>
|
|
311 <Iteration_hits></Iteration_hits>
|
|
312 <Iteration_stat>
|
|
313 <Statistics>
|
|
314 <Statistics_db-num>0</Statistics_db-num>
|
|
315 <Statistics_db-len>0</Statistics_db-len>
|
|
316 <Statistics_hsp-len>24</Statistics_hsp-len>
|
|
317 <Statistics_eff-space>441350</Statistics_eff-space>
|
|
318 <Statistics_kappa>0.071</Statistics_kappa>
|
|
319 <Statistics_lambda>0.299</Statistics_lambda>
|
|
320 <Statistics_entropy>0.27</Statistics_entropy>
|
|
321 </Statistics>
|
|
322 </Iteration_stat>
|
|
323 <Iteration_message>No hits found</Iteration_message>
|
|
324 </Iteration>
|
|
325 <Iteration>
|
|
326 <Iteration_iter-num>17</Iteration_iter-num>
|
|
327 <Iteration_query-ID>Query_3</Iteration_query-ID>
|
|
328 <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
|
|
329 <Iteration_query-len>1382</Iteration_query-len>
|
|
330 <Iteration_hits></Iteration_hits>
|
|
331 <Iteration_stat>
|
|
332 <Statistics>
|
|
333 <Statistics_db-num>0</Statistics_db-num>
|
|
334 <Statistics_db-len>0</Statistics_db-len>
|
|
335 <Statistics_hsp-len>24</Statistics_hsp-len>
|
|
336 <Statistics_eff-space>441350</Statistics_eff-space>
|
|
337 <Statistics_kappa>0.071</Statistics_kappa>
|
|
338 <Statistics_lambda>0.299</Statistics_lambda>
|
|
339 <Statistics_entropy>0.27</Statistics_entropy>
|
|
340 </Statistics>
|
|
341 </Iteration_stat>
|
|
342 <Iteration_message>No hits found</Iteration_message>
|
|
343 </Iteration>
|
|
344 <Iteration>
|
|
345 <Iteration_iter-num>18</Iteration_iter-num>
|
|
346 <Iteration_query-ID>Query_3</Iteration_query-ID>
|
|
347 <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
|
|
348 <Iteration_query-len>1382</Iteration_query-len>
|
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349 <Iteration_hits></Iteration_hits>
|
|
350 <Iteration_stat>
|
|
351 <Statistics>
|
|
352 <Statistics_db-num>0</Statistics_db-num>
|
|
353 <Statistics_db-len>0</Statistics_db-len>
|
|
354 <Statistics_hsp-len>24</Statistics_hsp-len>
|
|
355 <Statistics_eff-space>441350</Statistics_eff-space>
|
|
356 <Statistics_kappa>0.071</Statistics_kappa>
|
|
357 <Statistics_lambda>0.299</Statistics_lambda>
|
|
358 <Statistics_entropy>0.27</Statistics_entropy>
|
|
359 </Statistics>
|
|
360 </Iteration_stat>
|
|
361 <Iteration_message>No hits found</Iteration_message>
|
|
362 </Iteration>
|
|
363 <Iteration>
|
|
364 <Iteration_iter-num>19</Iteration_iter-num>
|
|
365 <Iteration_query-ID>Query_4</Iteration_query-ID>
|
|
366 <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
|
|
367 <Iteration_query-len>348</Iteration_query-len>
|
|
368 <Iteration_hits>
|
|
369 <Hit>
|
|
370 <Hit_num>1</Hit_num>
|
|
371 <Hit_id>Subject_1</Hit_id>
|
|
372 <Hit_def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</Hit_def>
|
|
373 <Hit_accession>Subject_1</Hit_accession>
|
|
374 <Hit_len>1047</Hit_len>
|
|
375 <Hit_hsps>
|
|
376 <Hsp>
|
|
377 <Hsp_num>1</Hsp_num>
|
|
378 <Hsp_bit-score>732.392902459534</Hsp_bit-score>
|
|
379 <Hsp_score>1689</Hsp_score>
|
|
380 <Hsp_evalue>0</Hsp_evalue>
|
|
381 <Hsp_query-from>1</Hsp_query-from>
|
|
382 <Hsp_query-to>348</Hsp_query-to>
|
|
383 <Hsp_hit-from>1</Hsp_hit-from>
|
|
384 <Hsp_hit-to>1044</Hsp_hit-to>
|
|
385 <Hsp_query-frame>0</Hsp_query-frame>
|
|
386 <Hsp_hit-frame>1</Hsp_hit-frame>
|
|
387 <Hsp_identity>336</Hsp_identity>
|
|
388 <Hsp_positive>343</Hsp_positive>
|
|
389 <Hsp_gaps>0</Hsp_gaps>
|
|
390 <Hsp_align-len>348</Hsp_align-len>
|
|
391 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_qseq>
|
|
392 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_hseq>
|
|
393 <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA</Hsp_midline>
|
|
394 </Hsp>
|
|
395 </Hit_hsps>
|
|
396 </Hit>
|
|
397 </Iteration_hits>
|
|
398 <Iteration_stat>
|
|
399 <Statistics>
|
|
400 <Statistics_db-num>0</Statistics_db-num>
|
|
401 <Statistics_db-len>0</Statistics_db-len>
|
|
402 <Statistics_hsp-len>18</Statistics_hsp-len>
|
|
403 <Statistics_eff-space>109230</Statistics_eff-space>
|
|
404 <Statistics_kappa>0.071</Statistics_kappa>
|
|
405 <Statistics_lambda>0.299</Statistics_lambda>
|
|
406 <Statistics_entropy>0.27</Statistics_entropy>
|
|
407 </Statistics>
|
|
408 </Iteration_stat>
|
|
409 </Iteration>
|
|
410 <Iteration>
|
|
411 <Iteration_iter-num>20</Iteration_iter-num>
|
|
412 <Iteration_query-ID>Query_4</Iteration_query-ID>
|
|
413 <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
|
|
414 <Iteration_query-len>348</Iteration_query-len>
|
|
415 <Iteration_hits>
|
|
416 <Hit>
|
|
417 <Hit_num>1</Hit_num>
|
|
418 <Hit_id>Subject_2</Hit_id>
|
|
419 <Hit_def>gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds</Hit_def>
|
|
420 <Hit_accession>Subject_2</Hit_accession>
|
|
421 <Hit_len>1574</Hit_len>
|
|
422 <Hit_hsps>
|
|
423 <Hsp>
|
|
424 <Hsp_num>1</Hsp_num>
|
|
425 <Hsp_bit-score>646.119739014374</Hsp_bit-score>
|
|
426 <Hsp_score>1489</Hsp_score>
|
|
427 <Hsp_evalue>0</Hsp_evalue>
|
|
428 <Hsp_query-from>1</Hsp_query-from>
|
|
429 <Hsp_query-to>341</Hsp_query-to>
|
|
430 <Hsp_hit-from>42</Hsp_hit-from>
|
|
431 <Hsp_hit-to>1067</Hsp_hit-to>
|
|
432 <Hsp_query-frame>0</Hsp_query-frame>
|
|
433 <Hsp_hit-frame>3</Hsp_hit-frame>
|
|
434 <Hsp_identity>290</Hsp_identity>
|
|
435 <Hsp_positive>320</Hsp_positive>
|
|
436 <Hsp_gaps>1</Hsp_gaps>
|
|
437 <Hsp_align-len>342</Hsp_align-len>
|
|
438 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEA-SATVSKTE</Hsp_qseq>
|
|
439 <Hsp_hseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTE</Hsp_hseq>
|
|
440 <Hsp_midline>MNGTEGPNFY+P SN TGVVRSPFEYPQYYLAEPWQ+S+L AYMFLLI+LGFPINF+TLYVT+QHKKLRTPLNYILLNLA A+ FMVL GFT T+Y+S+ GYF+ G TGC +EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF ENHA+MGVAFTW+MAL+CA PPL GWSRYIPEG+QCSCG+DYYTLKPEVNNESFVIYMFVVHFTIP+IIIFFCYG+LV TVKEAAAQQQESATTQKAEKEVTRMVIIMV+ FLICWVPYASVAF+IF+ QGS FGPIFMT+PAFFAKS++IYNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+A SA SKTE</Hsp_midline>
|
|
441 </Hsp>
|
|
442 </Hit_hsps>
|
|
443 </Hit>
|
|
444 </Iteration_hits>
|
|
445 <Iteration_stat>
|
|
446 <Statistics>
|
|
447 <Statistics_db-num>0</Statistics_db-num>
|
|
448 <Statistics_db-len>0</Statistics_db-len>
|
|
449 <Statistics_hsp-len>18</Statistics_hsp-len>
|
|
450 <Statistics_eff-space>109230</Statistics_eff-space>
|
|
451 <Statistics_kappa>0.071</Statistics_kappa>
|
|
452 <Statistics_lambda>0.299</Statistics_lambda>
|
|
453 <Statistics_entropy>0.27</Statistics_entropy>
|
|
454 </Statistics>
|
|
455 </Iteration_stat>
|
|
456 </Iteration>
|
|
457 <Iteration>
|
|
458 <Iteration_iter-num>21</Iteration_iter-num>
|
|
459 <Iteration_query-ID>Query_4</Iteration_query-ID>
|
|
460 <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
|
|
461 <Iteration_query-len>348</Iteration_query-len>
|
|
462 <Iteration_hits>
|
|
463 <Hit>
|
|
464 <Hit_num>1</Hit_num>
|
|
465 <Hit_id>Subject_3</Hit_id>
|
|
466 <Hit_def>gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds</Hit_def>
|
|
467 <Hit_accession>Subject_3</Hit_accession>
|
|
468 <Hit_len>4301</Hit_len>
|
|
469 <Hit_hsps>
|
|
470 <Hsp>
|
|
471 <Hsp_num>1</Hsp_num>
|
|
472 <Hsp_bit-score>151.343146656381</Hsp_bit-score>
|
|
473 <Hsp_score>342</Hsp_score>
|
|
474 <Hsp_evalue>1.39566684546685e-72</Hsp_evalue>
|
|
475 <Hsp_query-from>239</Hsp_query-from>
|
|
476 <Hsp_query-to>312</Hsp_query-to>
|
|
477 <Hsp_hit-from>3147</Hsp_hit-from>
|
|
478 <Hsp_hit-to>3368</Hsp_hit-to>
|
|
479 <Hsp_query-frame>0</Hsp_query-frame>
|
|
480 <Hsp_hit-frame>3</Hsp_hit-frame>
|
|
481 <Hsp_identity>69</Hsp_identity>
|
|
482 <Hsp_positive>73</Hsp_positive>
|
|
483 <Hsp_gaps>0</Hsp_gaps>
|
|
484 <Hsp_align-len>74</Hsp_align-len>
|
|
485 <Hsp_qseq>ESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQ</Hsp_qseq>
|
|
486 <Hsp_hseq>ESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQ</Hsp_hseq>
|
|
487 <Hsp_midline>ESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQ</Hsp_midline>
|
|
488 </Hsp>
|
|
489 <Hsp>
|
|
490 <Hsp_num>2</Hsp_num>
|
|
491 <Hsp_bit-score>126.323929257285</Hsp_bit-score>
|
|
492 <Hsp_score>284</Hsp_score>
|
|
493 <Hsp_evalue>1.39566684546685e-72</Hsp_evalue>
|
|
494 <Hsp_query-from>177</Hsp_query-from>
|
|
495 <Hsp_query-to>235</Hsp_query-to>
|
|
496 <Hsp_hit-from>2855</Hsp_hit-from>
|
|
497 <Hsp_hit-to>3031</Hsp_hit-to>
|
|
498 <Hsp_query-frame>0</Hsp_query-frame>
|
|
499 <Hsp_hit-frame>2</Hsp_hit-frame>
|
|
500 <Hsp_identity>54</Hsp_identity>
|
|
501 <Hsp_positive>57</Hsp_positive>
|
|
502 <Hsp_gaps>0</Hsp_gaps>
|
|
503 <Hsp_align-len>59</Hsp_align-len>
|
|
504 <Hsp_qseq>RYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAA</Hsp_qseq>
|
|
505 <Hsp_hseq>RYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEVRS</Hsp_hseq>
|
|
506 <Hsp_midline>RYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKE +</Hsp_midline>
|
|
507 </Hsp>
|
|
508 <Hsp>
|
|
509 <Hsp_num>3</Hsp_num>
|
|
510 <Hsp_bit-score>229.420359574251</Hsp_bit-score>
|
|
511 <Hsp_score>523</Hsp_score>
|
|
512 <Hsp_evalue>9.84654801241353e-65</Hsp_evalue>
|
|
513 <Hsp_query-from>11</Hsp_query-from>
|
|
514 <Hsp_query-to>121</Hsp_query-to>
|
|
515 <Hsp_hit-from>1</Hsp_hit-from>
|
|
516 <Hsp_hit-to>333</Hsp_hit-to>
|
|
517 <Hsp_query-frame>0</Hsp_query-frame>
|
|
518 <Hsp_hit-frame>1</Hsp_hit-frame>
|
|
519 <Hsp_identity>107</Hsp_identity>
|
|
520 <Hsp_positive>109</Hsp_positive>
|
|
521 <Hsp_gaps>0</Hsp_gaps>
|
|
522 <Hsp_align-len>111</Hsp_align-len>
|
|
523 <Hsp_qseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_qseq>
|
|
524 <Hsp_hseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_hseq>
|
|
525 <Hsp_midline>VPFSN TGVVRSPFE+PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_midline>
|
|
526 </Hsp>
|
|
527 <Hsp>
|
|
528 <Hsp_num>4</Hsp_num>
|
|
529 <Hsp_bit-score>122.873002719478</Hsp_bit-score>
|
|
530 <Hsp_score>276</Hsp_score>
|
|
531 <Hsp_evalue>1.40732096096596e-32</Hsp_evalue>
|
|
532 <Hsp_query-from>119</Hsp_query-from>
|
|
533 <Hsp_query-to>177</Hsp_query-to>
|
|
534 <Hsp_hit-from>1404</Hsp_hit-from>
|
|
535 <Hsp_hit-to>1580</Hsp_hit-to>
|
|
536 <Hsp_query-frame>0</Hsp_query-frame>
|
|
537 <Hsp_hit-frame>3</Hsp_hit-frame>
|
|
538 <Hsp_identity>55</Hsp_identity>
|
|
539 <Hsp_positive>56</Hsp_positive>
|
|
540 <Hsp_gaps>0</Hsp_gaps>
|
|
541 <Hsp_align-len>59</Hsp_align-len>
|
|
542 <Hsp_qseq>LGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSR</Hsp_qseq>
|
|
543 <Hsp_hseq>LAGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSR</Hsp_hseq>
|
|
544 <Hsp_midline>L GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+A TWVMALACAAPPL GWSR</Hsp_midline>
|
|
545 </Hsp>
|
|
546 <Hsp>
|
|
547 <Hsp_num>5</Hsp_num>
|
|
548 <Hsp_bit-score>57.7367643183824</Hsp_bit-score>
|
|
549 <Hsp_score>125</Hsp_score>
|
|
550 <Hsp_evalue>5.60065526485586e-13</Hsp_evalue>
|
|
551 <Hsp_query-from>312</Hsp_query-from>
|
|
552 <Hsp_query-to>337</Hsp_query-to>
|
|
553 <Hsp_hit-from>4222</Hsp_hit-from>
|
|
554 <Hsp_hit-to>4299</Hsp_hit-to>
|
|
555 <Hsp_query-frame>0</Hsp_query-frame>
|
|
556 <Hsp_hit-frame>1</Hsp_hit-frame>
|
|
557 <Hsp_identity>23</Hsp_identity>
|
|
558 <Hsp_positive>24</Hsp_positive>
|
|
559 <Hsp_gaps>0</Hsp_gaps>
|
|
560 <Hsp_align-len>26</Hsp_align-len>
|
|
561 <Hsp_qseq>QFRNCMLTTICCGKNPLGDDEASATV</Hsp_qseq>
|
|
562 <Hsp_hseq>QFRNCMLTTLCCGKNPLGDDEASTTA</Hsp_hseq>
|
|
563 <Hsp_midline>QFRNCMLTT+CCGKNPLGDDEAS T </Hsp_midline>
|
|
564 </Hsp>
|
|
565 </Hit_hsps>
|
|
566 </Hit>
|
|
567 </Iteration_hits>
|
|
568 <Iteration_stat>
|
|
569 <Statistics>
|
|
570 <Statistics_db-num>0</Statistics_db-num>
|
|
571 <Statistics_db-len>0</Statistics_db-len>
|
|
572 <Statistics_hsp-len>18</Statistics_hsp-len>
|
|
573 <Statistics_eff-space>109230</Statistics_eff-space>
|
|
574 <Statistics_kappa>0.071</Statistics_kappa>
|
|
575 <Statistics_lambda>0.299</Statistics_lambda>
|
|
576 <Statistics_entropy>0.27</Statistics_entropy>
|
|
577 </Statistics>
|
|
578 </Iteration_stat>
|
|
579 </Iteration>
|
|
580 <Iteration>
|
|
581 <Iteration_iter-num>22</Iteration_iter-num>
|
|
582 <Iteration_query-ID>Query_4</Iteration_query-ID>
|
|
583 <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
|
|
584 <Iteration_query-len>348</Iteration_query-len>
|
|
585 <Iteration_hits>
|
|
586 <Hit>
|
|
587 <Hit_num>1</Hit_num>
|
|
588 <Hit_id>Subject_4</Hit_id>
|
|
589 <Hit_def>gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds</Hit_def>
|
|
590 <Hit_accession>Subject_4</Hit_accession>
|
|
591 <Hit_len>983</Hit_len>
|
|
592 <Hit_hsps>
|
|
593 <Hsp>
|
|
594 <Hsp_num>1</Hsp_num>
|
|
595 <Hsp_bit-score>658.197981896696</Hsp_bit-score>
|
|
596 <Hsp_score>1517</Hsp_score>
|
|
597 <Hsp_evalue>0</Hsp_evalue>
|
|
598 <Hsp_query-from>11</Hsp_query-from>
|
|
599 <Hsp_query-to>336</Hsp_query-to>
|
|
600 <Hsp_hit-from>1</Hsp_hit-from>
|
|
601 <Hsp_hit-to>978</Hsp_hit-to>
|
|
602 <Hsp_query-frame>0</Hsp_query-frame>
|
|
603 <Hsp_hit-frame>1</Hsp_hit-frame>
|
|
604 <Hsp_identity>310</Hsp_identity>
|
|
605 <Hsp_positive>322</Hsp_positive>
|
|
606 <Hsp_gaps>0</Hsp_gaps>
|
|
607 <Hsp_align-len>326</Hsp_align-len>
|
|
608 <Hsp_qseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASAT</Hsp_qseq>
|
|
609 <Hsp_hseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTT</Hsp_hseq>
|
|
610 <Hsp_midline>VPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMV GGFT+TLYTS+HGYFVFG TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+AFTWVMALACAAPPLAGWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMV+AFLICW+PYASVAFYIFTHQGSNFGP+FMTIPAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T</Hsp_midline>
|
|
611 </Hsp>
|
|
612 </Hit_hsps>
|
|
613 </Hit>
|
|
614 </Iteration_hits>
|
|
615 <Iteration_stat>
|
|
616 <Statistics>
|
|
617 <Statistics_db-num>0</Statistics_db-num>
|
|
618 <Statistics_db-len>0</Statistics_db-len>
|
|
619 <Statistics_hsp-len>18</Statistics_hsp-len>
|
|
620 <Statistics_eff-space>109230</Statistics_eff-space>
|
|
621 <Statistics_kappa>0.071</Statistics_kappa>
|
|
622 <Statistics_lambda>0.299</Statistics_lambda>
|
|
623 <Statistics_entropy>0.27</Statistics_entropy>
|
|
624 </Statistics>
|
|
625 </Iteration_stat>
|
|
626 </Iteration>
|
|
627 <Iteration>
|
|
628 <Iteration_iter-num>23</Iteration_iter-num>
|
|
629 <Iteration_query-ID>Query_4</Iteration_query-ID>
|
|
630 <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
|
|
631 <Iteration_query-len>348</Iteration_query-len>
|
|
632 <Iteration_hits>
|
|
633 <Hit>
|
|
634 <Hit_num>1</Hit_num>
|
|
635 <Hit_id>Subject_5</Hit_id>
|
|
636 <Hit_def>gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds</Hit_def>
|
|
637 <Hit_accession>Subject_5</Hit_accession>
|
|
638 <Hit_len>1047</Hit_len>
|
|
639 <Hit_hsps>
|
|
640 <Hsp>
|
|
641 <Hsp_num>1</Hsp_num>
|
|
642 <Hsp_bit-score>711.255977415469</Hsp_bit-score>
|
|
643 <Hsp_score>1640</Hsp_score>
|
|
644 <Hsp_evalue>0</Hsp_evalue>
|
|
645 <Hsp_query-from>1</Hsp_query-from>
|
|
646 <Hsp_query-to>348</Hsp_query-to>
|
|
647 <Hsp_hit-from>1</Hsp_hit-from>
|
|
648 <Hsp_hit-to>1044</Hsp_hit-to>
|
|
649 <Hsp_query-frame>0</Hsp_query-frame>
|
|
650 <Hsp_hit-frame>1</Hsp_hit-frame>
|
|
651 <Hsp_identity>325</Hsp_identity>
|
|
652 <Hsp_positive>337</Hsp_positive>
|
|
653 <Hsp_gaps>0</Hsp_gaps>
|
|
654 <Hsp_align-len>348</Hsp_align-len>
|
|
655 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_qseq>
|
|
656 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_hseq>
|
|
657 <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFE PQYYLAEPWQFSMLAAYMFLLI+LGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYT E NNESFVIYMFVVHF IP+I+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGS+FGPIFMTIPAFFAK++A+YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA</Hsp_midline>
|
|
658 </Hsp>
|
|
659 </Hit_hsps>
|
|
660 </Hit>
|
|
661 </Iteration_hits>
|
|
662 <Iteration_stat>
|
|
663 <Statistics>
|
|
664 <Statistics_db-num>0</Statistics_db-num>
|
|
665 <Statistics_db-len>0</Statistics_db-len>
|
|
666 <Statistics_hsp-len>18</Statistics_hsp-len>
|
|
667 <Statistics_eff-space>109230</Statistics_eff-space>
|
|
668 <Statistics_kappa>0.071</Statistics_kappa>
|
|
669 <Statistics_lambda>0.299</Statistics_lambda>
|
|
670 <Statistics_entropy>0.27</Statistics_entropy>
|
|
671 </Statistics>
|
|
672 </Iteration_stat>
|
|
673 </Iteration>
|
|
674 <Iteration>
|
|
675 <Iteration_iter-num>24</Iteration_iter-num>
|
|
676 <Iteration_query-ID>Query_4</Iteration_query-ID>
|
|
677 <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
|
|
678 <Iteration_query-len>348</Iteration_query-len>
|
|
679 <Iteration_hits>
|
|
680 <Hit>
|
|
681 <Hit_num>1</Hit_num>
|
|
682 <Hit_id>Subject_6</Hit_id>
|
|
683 <Hit_def>gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds</Hit_def>
|
|
684 <Hit_accession>Subject_6</Hit_accession>
|
|
685 <Hit_len>1344</Hit_len>
|
|
686 <Hit_hsps>
|
|
687 <Hsp>
|
|
688 <Hsp_num>1</Hsp_num>
|
|
689 <Hsp_bit-score>626.708277239213</Hsp_bit-score>
|
|
690 <Hsp_score>1444</Hsp_score>
|
|
691 <Hsp_evalue>0</Hsp_evalue>
|
|
692 <Hsp_query-from>1</Hsp_query-from>
|
|
693 <Hsp_query-to>341</Hsp_query-to>
|
|
694 <Hsp_hit-from>23</Hsp_hit-from>
|
|
695 <Hsp_hit-to>1048</Hsp_hit-to>
|
|
696 <Hsp_query-frame>0</Hsp_query-frame>
|
|
697 <Hsp_hit-frame>2</Hsp_hit-frame>
|
|
698 <Hsp_identity>281</Hsp_identity>
|
|
699 <Hsp_positive>311</Hsp_positive>
|
|
700 <Hsp_gaps>1</Hsp_gaps>
|
|
701 <Hsp_align-len>342</Hsp_align-len>
|
|
702 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPL-GDDEASATVSKTE</Hsp_qseq>
|
|
703 <Hsp_hseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTE</Hsp_hseq>
|
|
704 <Hsp_midline>MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLYVT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLGGEIALW LVVLAIER++VVCKP++NFRFGE HAIMGV TW MALACA PPL GWSRYIPEGLQCSCGIDYYT P +NNESFVIYMF HF+IP+ +I FCYG+LV TVKEAAAQQQES TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA YIFTHQGS FGPIFMTIP+FFAKS+A+YNP+IYI MNKQFR CM+TT+CCGKNP +D ASAT SKTE</Hsp_midline>
|
|
705 </Hsp>
|
|
706 </Hit_hsps>
|
|
707 </Hit>
|
|
708 </Iteration_hits>
|
|
709 <Iteration_stat>
|
|
710 <Statistics>
|
|
711 <Statistics_db-num>0</Statistics_db-num>
|
|
712 <Statistics_db-len>0</Statistics_db-len>
|
|
713 <Statistics_hsp-len>18</Statistics_hsp-len>
|
|
714 <Statistics_eff-space>109230</Statistics_eff-space>
|
|
715 <Statistics_kappa>0.071</Statistics_kappa>
|
|
716 <Statistics_lambda>0.299</Statistics_lambda>
|
|
717 <Statistics_entropy>0.27</Statistics_entropy>
|
|
718 </Statistics>
|
|
719 </Iteration_stat>
|
|
720 </Iteration>
|
|
721 </BlastOutput_iterations>
|
|
722 </BlastOutput>
|