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annotate test-data/four_human_proteins.fasta @ 19:7f3c448e119b draft

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v0.1.07 - fix macro problem in blastxml_to_tabular.xml, reenable .loc tests
author peterjc
date Thu, 19 Nov 2015 06:30:35 -0500
parents c16c30e9ad5b
children
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1 >sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
15
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2 MHPAVFLSLPDLRCSLLLLVTWVFTPVTTEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFP
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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3 NENQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITTLDRSK
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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4 RNIIGYFEQKDSDNYRVFERVANILHDDCAFLSAFGDVSKPERYSGDNIIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDK
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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5 CVPLVREITFENGEELTEEGLPFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHADCDKFRHPLLHIQKTPADCPV
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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6 IAIDSFRHMYVFGDFKDVLIPGKLKQFVFDLHSGKLHREFHHGPDPTDTAPGEQAQDVASSPPESSFQKLAPSEYRYTLL
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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7 RDRDEL
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8 >sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
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9 MKKFSRMPKSEGGSGGGAAGGGAGGAGAGAGCGSGGSSVGVRVFAVGRHQVTLEESLAEGGFSTVFLVRTHGGIRCALKR
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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10 MYVNNMPDLNVCKREITIMKELSGHKNIVGYLDCAVNSISDNVWEVLILMEYCRAGQVVNQMNKKLQTGFTEPEVLQIFC
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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11 DTCEAVARLHQCKTPIIHRDLKVENILLNDGGNYVLCDFGSATNKFLNPQKDGVNVVEEEIKKYTTLSYRAPEMINLYGG
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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12 KPITTKADIWALGCLLYKLCFFTLPFGESQVAICDGNFTIPDNSRYSRNIHCLIRFMLEPDPEHRPDIFQVSYFAFKFAK
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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13 KDCPVSNINNSSIPSALPEPMTASEAAARKSQIKARITDTIGPTETSIAPRQRPKANSATTATPSVLTIQSSATPVKVLA
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14 PGEFGNHRPKGALRPGNGPEILLGQGPPQQPPQQHRVLQQLQQGDWRLQQLHLQHRHPHQQQQQQQQQQQQQQQQQQQQQ
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15 QQQQQQHHHHHHHHLLQDAYMQQYQHATQQQQMLQQQFLMHSVYQPQPSASQYPTMMPQYQQAFFQQQMLAQHQPSQQQA
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16 SPEYLTSPQEFSPALVSYTSSLPAQVGTIMDSSYSANRSVADKEAIANFTNQKNISNPPDMSGWNPFGEDNFSKLTEEEL
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17 LDREFDLLRSNRLEERASSDKNVDSLSAPHNHPPEDPFGSVPFISHSGSPEKKAEHSSINQENGTANPIKNGKTSPASKD
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18 QRTGKKTSVQGQVQKGNDESESDFESDPPSPKSSEEEEQDDEEVLQGEQGDFNDDDTEPENLGHRPLLMDSEDEEEEEKH
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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19 SSDSDYEQAKAKYSDMSSVYRDRSGSGPTQDLNTILLTSAQLSSDVAVETPKQEFDVFGAVPFFAVRAQQPQQEKNEKNL
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20 PQHRFPAAGLEQEEFDVFTKAPFSKKVNVQECHAVGPEAHTIPGYPKSVDVFGSTPFQPFLTSTSKSESNEDLFGLVPFD
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21 EITGSQQQKVKQRSLQKLSSRQRRTKQDMSKSNGKRHHGTPTSTKKTLKPTYRTPERARRHKKVGRRDSQSSNEFLTISD
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22 SKENISVALTDGKDRGNVLQPEESLLDPFGAKPFHSPDLSWHPPHQGLSDIRADHNTVLPGRPRQNSLHGSFHSADVLKM
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23 DDFGAVPFTELVVQSITPHQSQQSQPVELDPFGAAPFPSKQ
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24 >sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
15
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25 MATGGRRGAAAAPLLVAVAALLLGAAGHLYPGEVCPGMDIRNNLTRLHELENCSVIEGHLQILLMFKTRPEDFRDLSFPK
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26 LIMITDYLLLFRVYGLESLKDLFPNLTVIRGSRLFFNYALVIFEMVHLKELGLYNLMNITRGSVRIEKNNELCYLATIDW
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27 SRILDSVEDNYIVLNKDDNEECGDICPGTAKGKTNCPATVINGQFVERCWTHSHCQKVCPTICKSHGCTAEGLCCHSECL
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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28 GNCSQPDDPTKCVACRNFYLDGRCVETCPPPYYHFQDWRCVNFSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGYT
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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29 MNSSNLLCTPCLGPCPKVCHLLEGEKTIDSVTSAQELRGCTVINGSLIINIRGGNNLAAELEANLGLIEEISGYLKIRRS
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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30 YALVSLSFFRKLRLIRGETLEIGNYSFYALDNQNLRQLWDWSKHNLTITQGKLFFHYNPKLCLSEIHKMEEVSGTKGRQE
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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31 RNDIALKTNGDQASCENELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVD
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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32 IDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIIL
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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33 KWKPPSDPNGNITHYLVFWERQAEDSELFELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQIL
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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34 KELEESSFRKTFEDYLHNVVFVPRKTSSGTGAEDPRPSRKRRSLGDVGNVTVAVPTVAAFPNTSSTSVPTSPEEHRPFEK
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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35 VVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADDIVGPVTHEIFENNVVHLMWQEPKEPNGL
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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36 IVLYEVSYRRYGDEELHLCVSRKHFALERGCRLRGLSPGNYSVRIRATSLAGNGSWTEPTYFYVTDYLDVPSNIAKIIIG
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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37 PLIFVFLFSVVIGSIYLFLRKRQPDGPLGPLYASSNPEYLSASDVFPCSVYVPDEWEVSREKITLLRELGQGSFGMVYEG
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38 NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRP
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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39 EAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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40 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMR
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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41 PTFLEIVNLLKDDLHPSFPEVSFFHSEENKAPESEELEMEFEDMENVPLDRSSHCQREEAGGRDGGSSLGFKRSYEEHIP
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42 YTHMNGGKKNGRILTLPRSNPS
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43 >sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
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44 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLA
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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45 VADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFT
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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46 WVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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47 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTT
c16c30e9ad5b Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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48 ICCGKNPLGDDEASATVSKTETSQVAPA