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comparison test-data/blastx_rhodopsin_vs_four_human.xml @ 11:4c4a0da938ff draft

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Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25. Supports $GALAXY_SLOTS. Includes more tests and heavy use of macros.
author peterjc
date Thu, 05 Dec 2013 06:55:59 -0500
parents 1f546099212f
children 623f727cdff1
comparison
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10:70e7dcbf6573 11:4c4a0da938ff
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd"> 2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
3 <BlastOutput> 3 <BlastOutput>
4 <BlastOutput_program>blastx</BlastOutput_program> 4 <BlastOutput_program>blastx</BlastOutput_program>
5 <BlastOutput_version>BLASTX 2.2.26+</BlastOutput_version> 5 <BlastOutput_version>BLASTX 2.2.28+</BlastOutput_version>
6 <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference> 6 <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
7 <BlastOutput_db></BlastOutput_db> 7 <BlastOutput_db></BlastOutput_db>
8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID> 8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
9 <BlastOutput_query-def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</BlastOutput_query-def> 9 <BlastOutput_query-def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</BlastOutput_query-def>
10 <BlastOutput_query-len>1047</BlastOutput_query-len> 10 <BlastOutput_query-len>1047</BlastOutput_query-len>
15 <Parameters_gap-open>11</Parameters_gap-open> 15 <Parameters_gap-open>11</Parameters_gap-open>
16 <Parameters_gap-extend>1</Parameters_gap-extend> 16 <Parameters_gap-extend>1</Parameters_gap-extend>
17 <Parameters_filter>L;</Parameters_filter> 17 <Parameters_filter>L;</Parameters_filter>
18 </Parameters> 18 </Parameters>
19 </BlastOutput_param> 19 </BlastOutput_param>
20 <BlastOutput_iterations> 20 <BlastOutput_iterations>
21 <Iteration> 21 <Iteration>
22 <Iteration_iter-num>1</Iteration_iter-num> 22 <Iteration_iter-num>1</Iteration_iter-num>
23 <Iteration_query-ID>Query_1</Iteration_query-ID> 23 <Iteration_query-ID>Query_1</Iteration_query-ID>
24 <Iteration_query-def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</Iteration_query-def> 24 <Iteration_query-def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</Iteration_query-def>
25 <Iteration_query-len>1047</Iteration_query-len> 25 <Iteration_query-len>1047</Iteration_query-len>
26 <Iteration_hits></Iteration_hits> 26 <Iteration_hits>
27 <Iteration_stat> 27 </Iteration_hits>
28 <Statistics> 28 <Iteration_stat>
29 <Statistics_db-num>0</Statistics_db-num> 29 <Statistics>
30 <Statistics_db-len>0</Statistics_db-len> 30 <Statistics_db-num>0</Statistics_db-num>
31 <Statistics_hsp-len>29</Statistics_hsp-len> 31 <Statistics_db-len>0</Statistics_db-len>
32 <Statistics_eff-space>102080</Statistics_eff-space> 32 <Statistics_hsp-len>30</Statistics_hsp-len>
33 <Statistics_kappa>0.041</Statistics_kappa> 33 <Statistics_eff-space>119944</Statistics_eff-space>
34 <Statistics_lambda>0.267</Statistics_lambda> 34 <Statistics_kappa>0.041</Statistics_kappa>
35 <Statistics_entropy>0.14</Statistics_entropy> 35 <Statistics_lambda>0.267</Statistics_lambda>
36 </Statistics> 36 <Statistics_entropy>0.14</Statistics_entropy>
37 </Iteration_stat> 37 </Statistics>
38 <Iteration_message>No hits found</Iteration_message> 38 </Iteration_stat>
39 </Iteration> 39 <Iteration_message>No hits found</Iteration_message>
40 <Iteration> 40 </Iteration>
41 <Iteration_iter-num>2</Iteration_iter-num> 41 <Iteration>
42 <Iteration_query-ID>Query_1</Iteration_query-ID> 42 <Iteration_iter-num>2</Iteration_iter-num>
43 <Iteration_query-def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</Iteration_query-def> 43 <Iteration_query-ID>Query_1</Iteration_query-ID>
44 <Iteration_query-len>1047</Iteration_query-len> 44 <Iteration_query-def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</Iteration_query-def>
45 <Iteration_hits></Iteration_hits> 45 <Iteration_query-len>1047</Iteration_query-len>
46 <Iteration_stat> 46 <Iteration_hits>
47 <Statistics> 47 </Iteration_hits>
48 <Statistics_db-num>0</Statistics_db-num> 48 <Iteration_stat>
49 <Statistics_db-len>0</Statistics_db-len> 49 <Statistics>
50 <Statistics_hsp-len>29</Statistics_hsp-len> 50 <Statistics_db-num>0</Statistics_db-num>
51 <Statistics_eff-space>102080</Statistics_eff-space> 51 <Statistics_db-len>0</Statistics_db-len>
52 <Statistics_kappa>0.041</Statistics_kappa> 52 <Statistics_hsp-len>30</Statistics_hsp-len>
53 <Statistics_lambda>0.267</Statistics_lambda> 53 <Statistics_eff-space>119944</Statistics_eff-space>
54 <Statistics_entropy>0.14</Statistics_entropy> 54 <Statistics_kappa>0.041</Statistics_kappa>
55 </Statistics> 55 <Statistics_lambda>0.267</Statistics_lambda>
56 </Iteration_stat> 56 <Statistics_entropy>0.14</Statistics_entropy>
57 <Iteration_message>No hits found</Iteration_message> 57 </Statistics>
58 </Iteration> 58 </Iteration_stat>
59 <Iteration> 59 <Iteration_message>No hits found</Iteration_message>
60 <Iteration_iter-num>3</Iteration_iter-num> 60 </Iteration>
61 <Iteration_query-ID>Query_1</Iteration_query-ID> 61 <Iteration>
62 <Iteration_query-def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</Iteration_query-def> 62 <Iteration_iter-num>3</Iteration_iter-num>
63 <Iteration_query-len>1047</Iteration_query-len> 63 <Iteration_query-ID>Query_1</Iteration_query-ID>
64 <Iteration_hits></Iteration_hits> 64 <Iteration_query-def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</Iteration_query-def>
65 <Iteration_stat> 65 <Iteration_query-len>1047</Iteration_query-len>
66 <Statistics> 66 <Iteration_hits>
67 <Statistics_db-num>0</Statistics_db-num> 67 </Iteration_hits>
68 <Statistics_db-len>0</Statistics_db-len> 68 <Iteration_stat>
69 <Statistics_hsp-len>29</Statistics_hsp-len> 69 <Statistics>
70 <Statistics_eff-space>102080</Statistics_eff-space> 70 <Statistics_db-num>0</Statistics_db-num>
71 <Statistics_kappa>0.041</Statistics_kappa> 71 <Statistics_db-len>0</Statistics_db-len>
72 <Statistics_lambda>0.267</Statistics_lambda> 72 <Statistics_hsp-len>30</Statistics_hsp-len>
73 <Statistics_entropy>0.14</Statistics_entropy> 73 <Statistics_eff-space>119944</Statistics_eff-space>
74 </Statistics> 74 <Statistics_kappa>0.041</Statistics_kappa>
75 </Iteration_stat> 75 <Statistics_lambda>0.267</Statistics_lambda>
76 <Iteration_message>No hits found</Iteration_message> 76 <Statistics_entropy>0.14</Statistics_entropy>
77 </Iteration> 77 </Statistics>
78 <Iteration> 78 </Iteration_stat>
79 <Iteration_iter-num>4</Iteration_iter-num> 79 <Iteration_message>No hits found</Iteration_message>
80 <Iteration_query-ID>Query_1</Iteration_query-ID> 80 </Iteration>
81 <Iteration_query-def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</Iteration_query-def> 81 <Iteration>
82 <Iteration_query-len>1047</Iteration_query-len> 82 <Iteration_iter-num>4</Iteration_iter-num>
83 <Iteration_hits> 83 <Iteration_query-ID>Query_1</Iteration_query-ID>
84 <Hit> 84 <Iteration_query-def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</Iteration_query-def>
85 <Hit_num>1</Hit_num> 85 <Iteration_query-len>1047</Iteration_query-len>
86 <Hit_id>Subject_4</Hit_id> 86 <Iteration_hits>
87 <Hit_def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Hit_def> 87 <Hit>
88 <Hit_accession>Subject_4</Hit_accession> 88 <Hit_num>1</Hit_num>
89 <Hit_len>348</Hit_len> 89 <Hit_id>Subject_4</Hit_id>
90 <Hit_hsps> 90 <Hit_def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Hit_def>
91 <Hsp> 91 <Hit_accession>Subject_4</Hit_accession>
92 <Hsp_num>1</Hsp_num> 92 <Hit_len>348</Hit_len>
93 <Hsp_bit-score>662.144</Hsp_bit-score> 93 <Hit_hsps>
94 <Hsp_score>1707</Hsp_score> 94 <Hsp>
95 <Hsp_evalue>0</Hsp_evalue> 95 <Hsp_num>1</Hsp_num>
96 <Hsp_query-from>1</Hsp_query-from> 96 <Hsp_bit-score>639.032</Hsp_bit-score>
97 <Hsp_query-to>1044</Hsp_query-to> 97 <Hsp_score>1647</Hsp_score>
98 <Hsp_hit-from>1</Hsp_hit-from> 98 <Hsp_evalue>0</Hsp_evalue>
99 <Hsp_hit-to>348</Hsp_hit-to> 99 <Hsp_query-from>1</Hsp_query-from>
100 <Hsp_query-frame>1</Hsp_query-frame> 100 <Hsp_query-to>1044</Hsp_query-to>
101 <Hsp_hit-frame>0</Hsp_hit-frame> 101 <Hsp_hit-from>1</Hsp_hit-from>
102 <Hsp_identity>336</Hsp_identity> 102 <Hsp_hit-to>348</Hsp_hit-to>
103 <Hsp_positive>343</Hsp_positive> 103 <Hsp_query-frame>1</Hsp_query-frame>
104 <Hsp_gaps>0</Hsp_gaps> 104 <Hsp_hit-frame>0</Hsp_hit-frame>
105 <Hsp_align-len>348</Hsp_align-len> 105 <Hsp_identity>336</Hsp_identity>
106 <Hsp_qseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_qseq> 106 <Hsp_positive>343</Hsp_positive>
107 <Hsp_hseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_hseq> 107 <Hsp_gaps>0</Hsp_gaps>
108 <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA</Hsp_midline> 108 <Hsp_align-len>348</Hsp_align-len>
109 </Hsp> 109 <Hsp_qseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_qseq>
110 </Hit_hsps> 110 <Hsp_hseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_hseq>
111 </Hit> 111 <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA</Hsp_midline>
112 </Iteration_hits> 112 </Hsp>
113 <Iteration_stat> 113 </Hit_hsps>
114 <Statistics> 114 </Hit>
115 <Statistics_db-num>0</Statistics_db-num> 115 </Iteration_hits>
116 <Statistics_db-len>0</Statistics_db-len> 116 <Iteration_stat>
117 <Statistics_hsp-len>29</Statistics_hsp-len> 117 <Statistics>
118 <Statistics_eff-space>102080</Statistics_eff-space> 118 <Statistics_db-num>0</Statistics_db-num>
119 <Statistics_kappa>0.041</Statistics_kappa> 119 <Statistics_db-len>0</Statistics_db-len>
120 <Statistics_lambda>0.267</Statistics_lambda> 120 <Statistics_hsp-len>30</Statistics_hsp-len>
121 <Statistics_entropy>0.14</Statistics_entropy> 121 <Statistics_eff-space>119944</Statistics_eff-space>
122 </Statistics> 122 <Statistics_kappa>0.041</Statistics_kappa>
123 </Iteration_stat> 123 <Statistics_lambda>0.267</Statistics_lambda>
124 </Iteration> 124 <Statistics_entropy>0.14</Statistics_entropy>
125 <Iteration> 125 </Statistics>
126 <Iteration_iter-num>5</Iteration_iter-num> 126 </Iteration_stat>
127 <Iteration_query-ID>Query_2</Iteration_query-ID> 127 </Iteration>
128 <Iteration_query-def>gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds</Iteration_query-def> 128 <Iteration>
129 <Iteration_query-len>1574</Iteration_query-len> 129 <Iteration_iter-num>5</Iteration_iter-num>
130 <Iteration_hits></Iteration_hits> 130 <Iteration_query-ID>Query_2</Iteration_query-ID>
131 <Iteration_stat> 131 <Iteration_query-def>gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds</Iteration_query-def>
132 <Statistics> 132 <Iteration_query-len>1574</Iteration_query-len>
133 <Statistics_db-num>0</Statistics_db-num> 133 <Iteration_hits>
134 <Statistics_db-len>0</Statistics_db-len> 134 </Iteration_hits>
135 <Statistics_hsp-len>32</Statistics_hsp-len> 135 <Iteration_stat>
136 <Statistics_eff-space>155472</Statistics_eff-space> 136 <Statistics>
137 <Statistics_kappa>0.041</Statistics_kappa> 137 <Statistics_db-num>0</Statistics_db-num>
138 <Statistics_lambda>0.267</Statistics_lambda> 138 <Statistics_db-len>0</Statistics_db-len>
139 <Statistics_entropy>0.14</Statistics_entropy> 139 <Statistics_hsp-len>33</Statistics_hsp-len>
140 </Statistics> 140 <Statistics_eff-space>183143</Statistics_eff-space>
141 </Iteration_stat> 141 <Statistics_kappa>0.041</Statistics_kappa>
142 <Iteration_message>No hits found</Iteration_message> 142 <Statistics_lambda>0.267</Statistics_lambda>
143 </Iteration> 143 <Statistics_entropy>0.14</Statistics_entropy>
144 <Iteration> 144 </Statistics>
145 <Iteration_iter-num>6</Iteration_iter-num> 145 </Iteration_stat>
146 <Iteration_query-ID>Query_2</Iteration_query-ID> 146 <Iteration_message>No hits found</Iteration_message>
147 <Iteration_query-def>gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds</Iteration_query-def> 147 </Iteration>
148 <Iteration_query-len>1574</Iteration_query-len> 148 <Iteration>
149 <Iteration_hits></Iteration_hits> 149 <Iteration_iter-num>6</Iteration_iter-num>
150 <Iteration_stat> 150 <Iteration_query-ID>Query_2</Iteration_query-ID>
151 <Statistics> 151 <Iteration_query-def>gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds</Iteration_query-def>
152 <Statistics_db-num>0</Statistics_db-num> 152 <Iteration_query-len>1574</Iteration_query-len>
153 <Statistics_db-len>0</Statistics_db-len> 153 <Iteration_hits>
154 <Statistics_hsp-len>32</Statistics_hsp-len> 154 </Iteration_hits>
155 <Statistics_eff-space>155472</Statistics_eff-space> 155 <Iteration_stat>
156 <Statistics_kappa>0.041</Statistics_kappa> 156 <Statistics>
157 <Statistics_lambda>0.267</Statistics_lambda> 157 <Statistics_db-num>0</Statistics_db-num>
158 <Statistics_entropy>0.14</Statistics_entropy> 158 <Statistics_db-len>0</Statistics_db-len>
159 </Statistics> 159 <Statistics_hsp-len>33</Statistics_hsp-len>
160 </Iteration_stat> 160 <Statistics_eff-space>183143</Statistics_eff-space>
161 <Iteration_message>No hits found</Iteration_message> 161 <Statistics_kappa>0.041</Statistics_kappa>
162 </Iteration> 162 <Statistics_lambda>0.267</Statistics_lambda>
163 <Iteration> 163 <Statistics_entropy>0.14</Statistics_entropy>
164 <Iteration_iter-num>7</Iteration_iter-num> 164 </Statistics>
165 <Iteration_query-ID>Query_2</Iteration_query-ID> 165 </Iteration_stat>
166 <Iteration_query-def>gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds</Iteration_query-def> 166 <Iteration_message>No hits found</Iteration_message>
167 <Iteration_query-len>1574</Iteration_query-len> 167 </Iteration>
168 <Iteration_hits></Iteration_hits> 168 <Iteration>
169 <Iteration_stat> 169 <Iteration_iter-num>7</Iteration_iter-num>
170 <Statistics> 170 <Iteration_query-ID>Query_2</Iteration_query-ID>
171 <Statistics_db-num>0</Statistics_db-num> 171 <Iteration_query-def>gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds</Iteration_query-def>
172 <Statistics_db-len>0</Statistics_db-len> 172 <Iteration_query-len>1574</Iteration_query-len>
173 <Statistics_hsp-len>32</Statistics_hsp-len> 173 <Iteration_hits>
174 <Statistics_eff-space>155472</Statistics_eff-space> 174 </Iteration_hits>
175 <Statistics_kappa>0.041</Statistics_kappa> 175 <Iteration_stat>
176 <Statistics_lambda>0.267</Statistics_lambda> 176 <Statistics>
177 <Statistics_entropy>0.14</Statistics_entropy> 177 <Statistics_db-num>0</Statistics_db-num>
178 </Statistics> 178 <Statistics_db-len>0</Statistics_db-len>
179 </Iteration_stat> 179 <Statistics_hsp-len>33</Statistics_hsp-len>
180 <Iteration_message>No hits found</Iteration_message> 180 <Statistics_eff-space>183143</Statistics_eff-space>
181 </Iteration> 181 <Statistics_kappa>0.041</Statistics_kappa>
182 <Iteration> 182 <Statistics_lambda>0.267</Statistics_lambda>
183 <Iteration_iter-num>8</Iteration_iter-num> 183 <Statistics_entropy>0.14</Statistics_entropy>
184 <Iteration_query-ID>Query_2</Iteration_query-ID> 184 </Statistics>
185 <Iteration_query-def>gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds</Iteration_query-def> 185 </Iteration_stat>
186 <Iteration_query-len>1574</Iteration_query-len> 186 <Iteration_message>No hits found</Iteration_message>
187 <Iteration_hits> 187 </Iteration>
188 <Hit> 188 <Iteration>
189 <Hit_num>1</Hit_num> 189 <Iteration_iter-num>8</Iteration_iter-num>
190 <Hit_id>Subject_4</Hit_id> 190 <Iteration_query-ID>Query_2</Iteration_query-ID>
191 <Hit_def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Hit_def> 191 <Iteration_query-def>gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds</Iteration_query-def>
192 <Hit_accession>Subject_4</Hit_accession> 192 <Iteration_query-len>1574</Iteration_query-len>
193 <Hit_len>348</Hit_len> 193 <Iteration_hits>
194 <Hit_hsps> 194 <Hit>
195 <Hsp> 195 <Hit_num>1</Hit_num>
196 <Hsp_num>1</Hsp_num> 196 <Hit_id>Subject_4</Hit_id>
197 <Hsp_bit-score>575.089</Hsp_bit-score> 197 <Hit_def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Hit_def>
198 <Hsp_score>1481</Hsp_score> 198 <Hit_accession>Subject_4</Hit_accession>
199 <Hsp_evalue>0</Hsp_evalue> 199 <Hit_len>348</Hit_len>
200 <Hsp_query-from>42</Hsp_query-from> 200 <Hit_hsps>
201 <Hsp_query-to>1037</Hsp_query-to> 201 <Hsp>
202 <Hsp_hit-from>1</Hsp_hit-from> 202 <Hsp_num>1</Hsp_num>
203 <Hsp_hit-to>332</Hsp_hit-to> 203 <Hsp_bit-score>551.206</Hsp_bit-score>
204 <Hsp_query-frame>3</Hsp_query-frame> 204 <Hsp_score>1419</Hsp_score>
205 <Hsp_hit-frame>0</Hsp_hit-frame> 205 <Hsp_evalue>0</Hsp_evalue>
206 <Hsp_identity>283</Hsp_identity> 206 <Hsp_query-from>42</Hsp_query-from>
207 <Hsp_positive>315</Hsp_positive> 207 <Hsp_query-to>1037</Hsp_query-to>
208 <Hsp_gaps>0</Hsp_gaps> 208 <Hsp_hit-from>1</Hsp_hit-from>
209 <Hsp_align-len>332</Hsp_align-len> 209 <Hsp_hit-to>332</Hsp_hit-to>
210 <Hsp_qseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDD</Hsp_qseq> 210 <Hsp_query-frame>3</Hsp_query-frame>
211 <Hsp_hseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDE</Hsp_hseq> 211 <Hsp_hit-frame>0</Hsp_hit-frame>
212 <Hsp_midline>MNGTEGPNFY+P SN TGVVRSPFEYPQYYLAEPWQ+S+L AYMFLLI+LGFPINF+TLYVT+QHKKLRTPLNYILLNLA A+ FMVL GFT T+Y+S++GYF+ G TGC +EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF ENHA+MGVAFTW+MAL+CA PPL GWSRYIPEG+QCSCG+DYYTLKPEVNNESFVIYMFVVHFTIP+IIIFFCYG+LV TVKEAAAQQQESATTQKAEKEVTRMVIIMV+ FLICWVPYASVAF+IF++QGS FGPIFMT+PAFFAKS++IYNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+</Hsp_midline> 212 <Hsp_identity>283</Hsp_identity>
213 </Hsp> 213 <Hsp_positive>315</Hsp_positive>
214 </Hit_hsps> 214 <Hsp_gaps>0</Hsp_gaps>
215 </Hit> 215 <Hsp_align-len>332</Hsp_align-len>
216 </Iteration_hits> 216 <Hsp_qseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDD</Hsp_qseq>
217 <Iteration_stat> 217 <Hsp_hseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDE</Hsp_hseq>
218 <Statistics> 218 <Hsp_midline>MNGTEGPNFY+P SN TGVVRSPFEYPQYYLAEPWQ+S+L AYMFLLI+LGFPINF+TLYVT+QHKKLRTPLNYILLNLA A+ FMVL GFT T+Y+S++GYF+ G TGC +EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF ENHA+MGVAFTW+MAL+CA PPL GWSRYIPEG+QCSCG+DYYTLKPEVNNESFVIYMFVVHFTIP+IIIFFCYG+LV TVKEAAAQQQESATTQKAEKEVTRMVIIMV+ FLICWVPYASVAF+IF++QGS FGPIFMT+PAFFAKS++IYNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+</Hsp_midline>
219 <Statistics_db-num>0</Statistics_db-num> 219 </Hsp>
220 <Statistics_db-len>0</Statistics_db-len> 220 </Hit_hsps>
221 <Statistics_hsp-len>32</Statistics_hsp-len> 221 </Hit>
222 <Statistics_eff-space>155472</Statistics_eff-space> 222 </Iteration_hits>
223 <Statistics_kappa>0.041</Statistics_kappa> 223 <Iteration_stat>
224 <Statistics_lambda>0.267</Statistics_lambda> 224 <Statistics>
225 <Statistics_entropy>0.14</Statistics_entropy> 225 <Statistics_db-num>0</Statistics_db-num>
226 </Statistics> 226 <Statistics_db-len>0</Statistics_db-len>
227 </Iteration_stat> 227 <Statistics_hsp-len>33</Statistics_hsp-len>
228 </Iteration> 228 <Statistics_eff-space>183143</Statistics_eff-space>
229 <Iteration> 229 <Statistics_kappa>0.041</Statistics_kappa>
230 <Iteration_iter-num>9</Iteration_iter-num> 230 <Statistics_lambda>0.267</Statistics_lambda>
231 <Iteration_query-ID>Query_3</Iteration_query-ID> 231 <Statistics_entropy>0.14</Statistics_entropy>
232 <Iteration_query-def>gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds</Iteration_query-def> 232 </Statistics>
233 <Iteration_query-len>4301</Iteration_query-len> 233 </Iteration_stat>
234 <Iteration_hits></Iteration_hits> 234 </Iteration>
235 <Iteration_stat> 235 <Iteration>
236 <Statistics> 236 <Iteration_iter-num>9</Iteration_iter-num>
237 <Statistics_db-num>0</Statistics_db-num> 237 <Iteration_query-ID>Query_3</Iteration_query-ID>
238 <Statistics_db-len>0</Statistics_db-len> 238 <Iteration_query-def>gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds</Iteration_query-def>
239 <Statistics_hsp-len>39</Statistics_hsp-len> 239 <Iteration_query-len>4301</Iteration_query-len>
240 <Statistics_eff-space>430746</Statistics_eff-space> 240 <Iteration_hits>
241 <Statistics_kappa>0.041</Statistics_kappa> 241 </Iteration_hits>
242 <Statistics_lambda>0.267</Statistics_lambda> 242 <Iteration_stat>
243 <Statistics_entropy>0.14</Statistics_entropy> 243 <Statistics>
244 </Statistics> 244 <Statistics_db-num>0</Statistics_db-num>
245 </Iteration_stat> 245 <Statistics_db-len>0</Statistics_db-len>
246 <Iteration_message>No hits found</Iteration_message> 246 <Statistics_hsp-len>40</Statistics_hsp-len>
247 </Iteration> 247 <Statistics_eff-space>509838</Statistics_eff-space>
248 <Iteration> 248 <Statistics_kappa>0.041</Statistics_kappa>
249 <Iteration_iter-num>10</Iteration_iter-num> 249 <Statistics_lambda>0.267</Statistics_lambda>
250 <Iteration_query-ID>Query_3</Iteration_query-ID> 250 <Statistics_entropy>0.14</Statistics_entropy>
251 <Iteration_query-def>gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds</Iteration_query-def> 251 </Statistics>
252 <Iteration_query-len>4301</Iteration_query-len> 252 </Iteration_stat>
253 <Iteration_hits></Iteration_hits> 253 <Iteration_message>No hits found</Iteration_message>
254 <Iteration_stat> 254 </Iteration>
255 <Statistics> 255 <Iteration>
256 <Statistics_db-num>0</Statistics_db-num> 256 <Iteration_iter-num>10</Iteration_iter-num>
257 <Statistics_db-len>0</Statistics_db-len> 257 <Iteration_query-ID>Query_3</Iteration_query-ID>
258 <Statistics_hsp-len>39</Statistics_hsp-len> 258 <Iteration_query-def>gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds</Iteration_query-def>
259 <Statistics_eff-space>430746</Statistics_eff-space> 259 <Iteration_query-len>4301</Iteration_query-len>
260 <Statistics_kappa>0.041</Statistics_kappa> 260 <Iteration_hits>
261 <Statistics_lambda>0.267</Statistics_lambda> 261 </Iteration_hits>
262 <Statistics_entropy>0.14</Statistics_entropy> 262 <Iteration_stat>
263 </Statistics> 263 <Statistics>
264 </Iteration_stat> 264 <Statistics_db-num>0</Statistics_db-num>
265 <Iteration_message>No hits found</Iteration_message> 265 <Statistics_db-len>0</Statistics_db-len>
266 </Iteration> 266 <Statistics_hsp-len>40</Statistics_hsp-len>
267 <Iteration> 267 <Statistics_eff-space>509838</Statistics_eff-space>
268 <Iteration_iter-num>11</Iteration_iter-num> 268 <Statistics_kappa>0.041</Statistics_kappa>
269 <Iteration_query-ID>Query_3</Iteration_query-ID> 269 <Statistics_lambda>0.267</Statistics_lambda>
270 <Iteration_query-def>gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds</Iteration_query-def> 270 <Statistics_entropy>0.14</Statistics_entropy>
271 <Iteration_query-len>4301</Iteration_query-len> 271 </Statistics>
272 <Iteration_hits></Iteration_hits> 272 </Iteration_stat>
273 <Iteration_stat> 273 <Iteration_message>No hits found</Iteration_message>
274 <Statistics> 274 </Iteration>
275 <Statistics_db-num>0</Statistics_db-num> 275 <Iteration>
276 <Statistics_db-len>0</Statistics_db-len> 276 <Iteration_iter-num>11</Iteration_iter-num>
277 <Statistics_hsp-len>39</Statistics_hsp-len> 277 <Iteration_query-ID>Query_3</Iteration_query-ID>
278 <Statistics_eff-space>430746</Statistics_eff-space> 278 <Iteration_query-def>gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds</Iteration_query-def>
279 <Statistics_kappa>0.041</Statistics_kappa> 279 <Iteration_query-len>4301</Iteration_query-len>
280 <Statistics_lambda>0.267</Statistics_lambda> 280 <Iteration_hits>
281 <Statistics_entropy>0.14</Statistics_entropy> 281 </Iteration_hits>
282 </Statistics> 282 <Iteration_stat>
283 </Iteration_stat> 283 <Statistics>
284 <Iteration_message>No hits found</Iteration_message> 284 <Statistics_db-num>0</Statistics_db-num>
285 </Iteration> 285 <Statistics_db-len>0</Statistics_db-len>
286 <Iteration> 286 <Statistics_hsp-len>40</Statistics_hsp-len>
287 <Iteration_iter-num>12</Iteration_iter-num> 287 <Statistics_eff-space>509838</Statistics_eff-space>
288 <Iteration_query-ID>Query_3</Iteration_query-ID> 288 <Statistics_kappa>0.041</Statistics_kappa>
289 <Iteration_query-def>gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds</Iteration_query-def> 289 <Statistics_lambda>0.267</Statistics_lambda>
290 <Iteration_query-len>4301</Iteration_query-len> 290 <Statistics_entropy>0.14</Statistics_entropy>
291 <Iteration_hits> 291 </Statistics>
292 <Hit> 292 </Iteration_stat>
293 <Hit_num>1</Hit_num> 293 <Iteration_message>No hits found</Iteration_message>
294 <Hit_id>Subject_4</Hit_id> 294 </Iteration>
295 <Hit_def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Hit_def> 295 <Iteration>
296 <Hit_accession>Subject_4</Hit_accession> 296 <Iteration_iter-num>12</Iteration_iter-num>
297 <Hit_len>348</Hit_len> 297 <Iteration_query-ID>Query_3</Iteration_query-ID>
298 <Hit_hsps> 298 <Iteration_query-def>gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds</Iteration_query-def>
299 <Hsp> 299 <Iteration_query-len>4301</Iteration_query-len>
300 <Hsp_num>1</Hsp_num> 300 <Iteration_hits>
301 <Hsp_bit-score>224.172</Hsp_bit-score> 301 <Hit>
302 <Hsp_score>570</Hsp_score> 302 <Hit_num>1</Hit_num>
303 <Hsp_evalue>1.84906e-68</Hsp_evalue> 303 <Hit_id>Subject_4</Hit_id>
304 <Hsp_query-from>1</Hsp_query-from> 304 <Hit_def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Hit_def>
305 <Hsp_query-to>333</Hsp_query-to> 305 <Hit_accession>Subject_4</Hit_accession>
306 <Hsp_hit-from>11</Hsp_hit-from> 306 <Hit_len>348</Hit_len>
307 <Hsp_hit-to>121</Hsp_hit-to> 307 <Hit_hsps>
308 <Hsp_query-frame>1</Hsp_query-frame> 308 <Hsp>
309 <Hsp_hit-frame>0</Hsp_hit-frame> 309 <Hsp_num>1</Hsp_num>
310 <Hsp_identity>107</Hsp_identity> 310 <Hsp_bit-score>220.32</Hsp_bit-score>
311 <Hsp_positive>109</Hsp_positive> 311 <Hsp_score>560</Hsp_score>
312 <Hsp_gaps>0</Hsp_gaps> 312 <Hsp_evalue>4.29169e-67</Hsp_evalue>
313 <Hsp_align-len>111</Hsp_align-len> 313 <Hsp_query-from>1</Hsp_query-from>
314 <Hsp_qseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_qseq> 314 <Hsp_query-to>333</Hsp_query-to>
315 <Hsp_hseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_hseq> 315 <Hsp_hit-from>11</Hsp_hit-from>
316 <Hsp_midline>VPFSN TGVVRSPFE+PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_midline> 316 <Hsp_hit-to>121</Hsp_hit-to>
317 </Hsp> 317 <Hsp_query-frame>1</Hsp_query-frame>
318 <Hsp> 318 <Hsp_hit-frame>0</Hsp_hit-frame>
319 <Hsp_num>2</Hsp_num> 319 <Hsp_identity>107</Hsp_identity>
320 <Hsp_bit-score>129.413</Hsp_bit-score> 320 <Hsp_positive>109</Hsp_positive>
321 <Hsp_score>324</Hsp_score> 321 <Hsp_gaps>0</Hsp_gaps>
322 <Hsp_evalue>4.62305e-36</Hsp_evalue> 322 <Hsp_align-len>111</Hsp_align-len>
323 <Hsp_query-from>3174</Hsp_query-from> 323 <Hsp_qseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_qseq>
324 <Hsp_query-to>3368</Hsp_query-to> 324 <Hsp_hseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_hseq>
325 <Hsp_hit-from>248</Hsp_hit-from> 325 <Hsp_midline>VPFSN TGVVRSPFE+PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_midline>
326 <Hsp_hit-to>312</Hsp_hit-to> 326 </Hsp>
327 <Hsp_query-frame>3</Hsp_query-frame> 327 <Hsp>
328 <Hsp_hit-frame>0</Hsp_hit-frame> 328 <Hsp_num>2</Hsp_num>
329 <Hsp_identity>60</Hsp_identity> 329 <Hsp_bit-score>127.487</Hsp_bit-score>
330 <Hsp_positive>64</Hsp_positive> 330 <Hsp_score>319</Hsp_score>
331 <Hsp_gaps>0</Hsp_gaps> 331 <Hsp_evalue>1.95079e-35</Hsp_evalue>
332 <Hsp_align-len>65</Hsp_align-len> 332 <Hsp_query-from>3174</Hsp_query-from>
333 <Hsp_qseq>KEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQ</Hsp_qseq> 333 <Hsp_query-to>3368</Hsp_query-to>
334 <Hsp_hseq>KEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQ</Hsp_hseq> 334 <Hsp_hit-from>248</Hsp_hit-from>
335 <Hsp_midline>KEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQ</Hsp_midline> 335 <Hsp_hit-to>312</Hsp_hit-to>
336 </Hsp> 336 <Hsp_query-frame>3</Hsp_query-frame>
337 <Hsp> 337 <Hsp_hit-frame>0</Hsp_hit-frame>
338 <Hsp_num>3</Hsp_num> 338 <Hsp_identity>60</Hsp_identity>
339 <Hsp_bit-score>120.939</Hsp_bit-score> 339 <Hsp_positive>64</Hsp_positive>
340 <Hsp_score>302</Hsp_score> 340 <Hsp_gaps>0</Hsp_gaps>
341 <Hsp_evalue>2.85192e-33</Hsp_evalue> 341 <Hsp_align-len>65</Hsp_align-len>
342 <Hsp_query-from>2855</Hsp_query-from> 342 <Hsp_qseq>KEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQ</Hsp_qseq>
343 <Hsp_query-to>3022</Hsp_query-to> 343 <Hsp_hseq>KEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQ</Hsp_hseq>
344 <Hsp_hit-from>177</Hsp_hit-from> 344 <Hsp_midline>KEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQ</Hsp_midline>
345 <Hsp_hit-to>232</Hsp_hit-to> 345 </Hsp>
346 <Hsp_query-frame>2</Hsp_query-frame> 346 <Hsp>
347 <Hsp_hit-frame>0</Hsp_hit-frame> 347 <Hsp_num>3</Hsp_num>
348 <Hsp_identity>54</Hsp_identity> 348 <Hsp_bit-score>121.324</Hsp_bit-score>
349 <Hsp_positive>56</Hsp_positive> 349 <Hsp_score>303</Hsp_score>
350 <Hsp_gaps>0</Hsp_gaps> 350 <Hsp_evalue>1.96633e-33</Hsp_evalue>
351 <Hsp_align-len>56</Hsp_align-len> 351 <Hsp_query-from>2855</Hsp_query-from>
352 <Hsp_qseq>RYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKE</Hsp_qseq> 352 <Hsp_query-to>3031</Hsp_query-to>
353 <Hsp_hseq>RYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKE</Hsp_hseq> 353 <Hsp_hit-from>177</Hsp_hit-from>
354 <Hsp_midline>RYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKE</Hsp_midline> 354 <Hsp_hit-to>235</Hsp_hit-to>
355 </Hsp> 355 <Hsp_query-frame>2</Hsp_query-frame>
356 <Hsp> 356 <Hsp_hit-frame>0</Hsp_hit-frame>
357 <Hsp_num>4</Hsp_num> 357 <Hsp_identity>54</Hsp_identity>
358 <Hsp_bit-score>118.242</Hsp_bit-score> 358 <Hsp_positive>57</Hsp_positive>
359 <Hsp_score>295</Hsp_score> 359 <Hsp_gaps>0</Hsp_gaps>
360 <Hsp_evalue>2.16231e-32</Hsp_evalue> 360 <Hsp_align-len>59</Hsp_align-len>
361 <Hsp_query-from>1404</Hsp_query-from> 361 <Hsp_qseq>RYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEVRS</Hsp_qseq>
362 <Hsp_query-to>1580</Hsp_query-to> 362 <Hsp_hseq>RYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAA</Hsp_hseq>
363 <Hsp_hit-from>119</Hsp_hit-from> 363 <Hsp_midline>RYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKE +</Hsp_midline>
364 <Hsp_hit-to>177</Hsp_hit-to> 364 </Hsp>
365 <Hsp_query-frame>3</Hsp_query-frame> 365 <Hsp>
366 <Hsp_hit-frame>0</Hsp_hit-frame> 366 <Hsp_num>4</Hsp_num>
367 <Hsp_identity>55</Hsp_identity> 367 <Hsp_bit-score>97.0561</Hsp_bit-score>
368 <Hsp_positive>56</Hsp_positive> 368 <Hsp_score>240</Hsp_score>
369 <Hsp_gaps>0</Hsp_gaps> 369 <Hsp_evalue>1.16473e-25</Hsp_evalue>
370 <Hsp_align-len>59</Hsp_align-len> 370 <Hsp_query-from>1404</Hsp_query-from>
371 <Hsp_qseq>LAGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSR</Hsp_qseq> 371 <Hsp_query-to>1580</Hsp_query-to>
372 <Hsp_hseq>LGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSR</Hsp_hseq> 372 <Hsp_hit-from>119</Hsp_hit-from>
373 <Hsp_midline>L GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+A TWVMALACAAPPL GWSR</Hsp_midline> 373 <Hsp_hit-to>177</Hsp_hit-to>
374 </Hsp> 374 <Hsp_query-frame>3</Hsp_query-frame>
375 <Hsp> 375 <Hsp_hit-frame>0</Hsp_hit-frame>
376 <Hsp_num>5</Hsp_num> 376 <Hsp_identity>55</Hsp_identity>
377 <Hsp_bit-score>56.225</Hsp_bit-score> 377 <Hsp_positive>56</Hsp_positive>
378 <Hsp_score>134</Hsp_score> 378 <Hsp_gaps>0</Hsp_gaps>
379 <Hsp_evalue>2.05678e-12</Hsp_evalue> 379 <Hsp_align-len>59</Hsp_align-len>
380 <Hsp_query-from>4222</Hsp_query-from> 380 <Hsp_qseq>LAGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSR</Hsp_qseq>
381 <Hsp_query-to>4296</Hsp_query-to> 381 <Hsp_hseq>LGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSR</Hsp_hseq>
382 <Hsp_hit-from>312</Hsp_hit-from> 382 <Hsp_midline>L GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+A TWVMALACAAPPL GWSR</Hsp_midline>
383 <Hsp_hit-to>336</Hsp_hit-to> 383 </Hsp>
384 <Hsp_query-frame>1</Hsp_query-frame> 384 <Hsp>
385 <Hsp_hit-frame>0</Hsp_hit-frame> 385 <Hsp_num>5</Hsp_num>
386 <Hsp_identity>23</Hsp_identity> 386 <Hsp_bit-score>56.9954</Hsp_bit-score>
387 <Hsp_positive>24</Hsp_positive> 387 <Hsp_score>136</Hsp_score>
388 <Hsp_gaps>0</Hsp_gaps> 388 <Hsp_evalue>1.23645e-12</Hsp_evalue>
389 <Hsp_align-len>25</Hsp_align-len> 389 <Hsp_query-from>4222</Hsp_query-from>
390 <Hsp_qseq>QFRNCMLTTLCCGKNPLGDDEASTT</Hsp_qseq> 390 <Hsp_query-to>4299</Hsp_query-to>
391 <Hsp_hseq>QFRNCMLTTICCGKNPLGDDEASAT</Hsp_hseq> 391 <Hsp_hit-from>312</Hsp_hit-from>
392 <Hsp_midline>QFRNCMLTT+CCGKNPLGDDEAS T</Hsp_midline> 392 <Hsp_hit-to>337</Hsp_hit-to>
393 </Hsp> 393 <Hsp_query-frame>1</Hsp_query-frame>
394 </Hit_hsps> 394 <Hsp_hit-frame>0</Hsp_hit-frame>
395 </Hit> 395 <Hsp_identity>23</Hsp_identity>
396 </Iteration_hits> 396 <Hsp_positive>24</Hsp_positive>
397 <Iteration_stat> 397 <Hsp_gaps>0</Hsp_gaps>
398 <Statistics> 398 <Hsp_align-len>26</Hsp_align-len>
399 <Statistics_db-num>0</Statistics_db-num> 399 <Hsp_qseq>QFRNCMLTTLCCGKNPLGDDEASTTA</Hsp_qseq>
400 <Statistics_db-len>0</Statistics_db-len> 400 <Hsp_hseq>QFRNCMLTTICCGKNPLGDDEASATV</Hsp_hseq>
401 <Statistics_hsp-len>39</Statistics_hsp-len> 401 <Hsp_midline>QFRNCMLTT+CCGKNPLGDDEAS T </Hsp_midline>
402 <Statistics_eff-space>430746</Statistics_eff-space> 402 </Hsp>
403 <Statistics_kappa>0.041</Statistics_kappa> 403 </Hit_hsps>
404 <Statistics_lambda>0.267</Statistics_lambda> 404 </Hit>
405 <Statistics_entropy>0.14</Statistics_entropy> 405 </Iteration_hits>
406 </Statistics> 406 <Iteration_stat>
407 </Iteration_stat> 407 <Statistics>
408 </Iteration> 408 <Statistics_db-num>0</Statistics_db-num>
409 <Iteration> 409 <Statistics_db-len>0</Statistics_db-len>
410 <Iteration_iter-num>13</Iteration_iter-num> 410 <Statistics_hsp-len>40</Statistics_hsp-len>
411 <Iteration_query-ID>Query_4</Iteration_query-ID> 411 <Statistics_eff-space>509838</Statistics_eff-space>
412 <Iteration_query-def>gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds</Iteration_query-def> 412 <Statistics_kappa>0.041</Statistics_kappa>
413 <Iteration_query-len>983</Iteration_query-len> 413 <Statistics_lambda>0.267</Statistics_lambda>
414 <Iteration_hits></Iteration_hits> 414 <Statistics_entropy>0.14</Statistics_entropy>
415 <Iteration_stat> 415 </Statistics>
416 <Statistics> 416 </Iteration_stat>
417 <Statistics_db-num>0</Statistics_db-num> 417 </Iteration>
418 <Statistics_db-len>0</Statistics_db-len> 418 <Iteration>
419 <Statistics_hsp-len>28</Statistics_hsp-len> 419 <Iteration_iter-num>13</Iteration_iter-num>
420 <Statistics_eff-space>95680</Statistics_eff-space> 420 <Iteration_query-ID>Query_4</Iteration_query-ID>
421 <Statistics_kappa>0.041</Statistics_kappa> 421 <Iteration_query-def>gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds</Iteration_query-def>
422 <Statistics_lambda>0.267</Statistics_lambda> 422 <Iteration_query-len>983</Iteration_query-len>
423 <Statistics_entropy>0.14</Statistics_entropy> 423 <Iteration_hits>
424 </Statistics> 424 </Iteration_hits>
425 </Iteration_stat> 425 <Iteration_stat>
426 <Iteration_message>No hits found</Iteration_message> 426 <Statistics>
427 </Iteration> 427 <Statistics_db-num>0</Statistics_db-num>
428 <Iteration> 428 <Statistics_db-len>0</Statistics_db-len>
429 <Iteration_iter-num>14</Iteration_iter-num> 429 <Statistics_hsp-len>29</Statistics_hsp-len>
430 <Iteration_query-ID>Query_4</Iteration_query-ID> 430 <Statistics_eff-space>112346</Statistics_eff-space>
431 <Iteration_query-def>gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds</Iteration_query-def> 431 <Statistics_kappa>0.041</Statistics_kappa>
432 <Iteration_query-len>983</Iteration_query-len> 432 <Statistics_lambda>0.267</Statistics_lambda>
433 <Iteration_hits></Iteration_hits> 433 <Statistics_entropy>0.14</Statistics_entropy>
434 <Iteration_stat> 434 </Statistics>
435 <Statistics> 435 </Iteration_stat>
436 <Statistics_db-num>0</Statistics_db-num> 436 <Iteration_message>No hits found</Iteration_message>
437 <Statistics_db-len>0</Statistics_db-len> 437 </Iteration>
438 <Statistics_hsp-len>28</Statistics_hsp-len> 438 <Iteration>
439 <Statistics_eff-space>95680</Statistics_eff-space> 439 <Iteration_iter-num>14</Iteration_iter-num>
440 <Statistics_kappa>0.041</Statistics_kappa> 440 <Iteration_query-ID>Query_4</Iteration_query-ID>
441 <Statistics_lambda>0.267</Statistics_lambda> 441 <Iteration_query-def>gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds</Iteration_query-def>
442 <Statistics_entropy>0.14</Statistics_entropy> 442 <Iteration_query-len>983</Iteration_query-len>
443 </Statistics> 443 <Iteration_hits>
444 </Iteration_stat> 444 </Iteration_hits>
445 <Iteration_message>No hits found</Iteration_message> 445 <Iteration_stat>
446 </Iteration> 446 <Statistics>
447 <Iteration> 447 <Statistics_db-num>0</Statistics_db-num>
448 <Iteration_iter-num>15</Iteration_iter-num> 448 <Statistics_db-len>0</Statistics_db-len>
449 <Iteration_query-ID>Query_4</Iteration_query-ID> 449 <Statistics_hsp-len>29</Statistics_hsp-len>
450 <Iteration_query-def>gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds</Iteration_query-def> 450 <Statistics_eff-space>112346</Statistics_eff-space>
451 <Iteration_query-len>983</Iteration_query-len> 451 <Statistics_kappa>0.041</Statistics_kappa>
452 <Iteration_hits></Iteration_hits> 452 <Statistics_lambda>0.267</Statistics_lambda>
453 <Iteration_stat> 453 <Statistics_entropy>0.14</Statistics_entropy>
454 <Statistics> 454 </Statistics>
455 <Statistics_db-num>0</Statistics_db-num> 455 </Iteration_stat>
456 <Statistics_db-len>0</Statistics_db-len> 456 <Iteration_message>No hits found</Iteration_message>
457 <Statistics_hsp-len>28</Statistics_hsp-len> 457 </Iteration>
458 <Statistics_eff-space>95680</Statistics_eff-space> 458 <Iteration>
459 <Statistics_kappa>0.041</Statistics_kappa> 459 <Iteration_iter-num>15</Iteration_iter-num>
460 <Statistics_lambda>0.267</Statistics_lambda> 460 <Iteration_query-ID>Query_4</Iteration_query-ID>
461 <Statistics_entropy>0.14</Statistics_entropy> 461 <Iteration_query-def>gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds</Iteration_query-def>
462 </Statistics> 462 <Iteration_query-len>983</Iteration_query-len>
463 </Iteration_stat> 463 <Iteration_hits>
464 <Iteration_message>No hits found</Iteration_message> 464 </Iteration_hits>
465 </Iteration> 465 <Iteration_stat>
466 <Iteration> 466 <Statistics>
467 <Iteration_iter-num>16</Iteration_iter-num> 467 <Statistics_db-num>0</Statistics_db-num>
468 <Iteration_query-ID>Query_4</Iteration_query-ID> 468 <Statistics_db-len>0</Statistics_db-len>
469 <Iteration_query-def>gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds</Iteration_query-def> 469 <Statistics_hsp-len>29</Statistics_hsp-len>
470 <Iteration_query-len>983</Iteration_query-len> 470 <Statistics_eff-space>112346</Statistics_eff-space>
471 <Iteration_hits> 471 <Statistics_kappa>0.041</Statistics_kappa>
472 <Hit> 472 <Statistics_lambda>0.267</Statistics_lambda>
473 <Hit_num>1</Hit_num> 473 <Statistics_entropy>0.14</Statistics_entropy>
474 <Hit_id>Subject_4</Hit_id> 474 </Statistics>
475 <Hit_def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Hit_def> 475 </Iteration_stat>
476 <Hit_accession>Subject_4</Hit_accession> 476 <Iteration_message>No hits found</Iteration_message>
477 <Hit_len>348</Hit_len> 477 </Iteration>
478 <Hit_hsps> 478 <Iteration>
479 <Hsp> 479 <Iteration_iter-num>16</Iteration_iter-num>
480 <Hsp_num>1</Hsp_num> 480 <Iteration_query-ID>Query_4</Iteration_query-ID>
481 <Hsp_bit-score>613.994</Hsp_bit-score> 481 <Iteration_query-def>gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds</Iteration_query-def>
482 <Hsp_score>1582</Hsp_score> 482 <Iteration_query-len>983</Iteration_query-len>
483 <Hsp_evalue>0</Hsp_evalue> 483 <Iteration_hits>
484 <Hsp_query-from>1</Hsp_query-from> 484 <Hit>
485 <Hsp_query-to>978</Hsp_query-to> 485 <Hit_num>1</Hit_num>
486 <Hsp_hit-from>11</Hsp_hit-from> 486 <Hit_id>Subject_4</Hit_id>
487 <Hsp_hit-to>336</Hsp_hit-to> 487 <Hit_def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Hit_def>
488 <Hsp_query-frame>1</Hsp_query-frame> 488 <Hit_accession>Subject_4</Hit_accession>
489 <Hsp_hit-frame>0</Hsp_hit-frame> 489 <Hit_len>348</Hit_len>
490 <Hsp_identity>310</Hsp_identity> 490 <Hit_hsps>
491 <Hsp_positive>322</Hsp_positive> 491 <Hsp>
492 <Hsp_gaps>0</Hsp_gaps> 492 <Hsp_num>1</Hsp_num>
493 <Hsp_align-len>326</Hsp_align-len> 493 <Hsp_bit-score>589.341</Hsp_bit-score>
494 <Hsp_qseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTT</Hsp_qseq> 494 <Hsp_score>1518</Hsp_score>
495 <Hsp_hseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASAT</Hsp_hseq> 495 <Hsp_evalue>0</Hsp_evalue>
496 <Hsp_midline>VPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMV GGFT+TLYTS+HGYFVFG TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+AFTWVMALACAAPPLAGWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMV+AFLICW+PYASVAFYIFTHQGSNFGP+FMTIPAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T</Hsp_midline> 496 <Hsp_query-from>1</Hsp_query-from>
497 </Hsp> 497 <Hsp_query-to>978</Hsp_query-to>
498 </Hit_hsps> 498 <Hsp_hit-from>11</Hsp_hit-from>
499 </Hit> 499 <Hsp_hit-to>336</Hsp_hit-to>
500 </Iteration_hits> 500 <Hsp_query-frame>1</Hsp_query-frame>
501 <Iteration_stat> 501 <Hsp_hit-frame>0</Hsp_hit-frame>
502 <Statistics> 502 <Hsp_identity>310</Hsp_identity>
503 <Statistics_db-num>0</Statistics_db-num> 503 <Hsp_positive>322</Hsp_positive>
504 <Statistics_db-len>0</Statistics_db-len> 504 <Hsp_gaps>0</Hsp_gaps>
505 <Statistics_hsp-len>28</Statistics_hsp-len> 505 <Hsp_align-len>326</Hsp_align-len>
506 <Statistics_eff-space>95680</Statistics_eff-space> 506 <Hsp_qseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTT</Hsp_qseq>
507 <Statistics_kappa>0.041</Statistics_kappa> 507 <Hsp_hseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASAT</Hsp_hseq>
508 <Statistics_lambda>0.267</Statistics_lambda> 508 <Hsp_midline>VPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMV GGFT+TLYTS+HGYFVFG TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+AFTWVMALACAAPPLAGWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMV+AFLICW+PYASVAFYIFTHQGSNFGP+FMTIPAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T</Hsp_midline>
509 <Statistics_entropy>0.14</Statistics_entropy> 509 </Hsp>
510 </Statistics> 510 </Hit_hsps>
511 </Iteration_stat> 511 </Hit>
512 </Iteration> 512 </Iteration_hits>
513 <Iteration> 513 <Iteration_stat>
514 <Iteration_iter-num>17</Iteration_iter-num> 514 <Statistics>
515 <Iteration_query-ID>Query_5</Iteration_query-ID> 515 <Statistics_db-num>0</Statistics_db-num>
516 <Iteration_query-def>gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds</Iteration_query-def> 516 <Statistics_db-len>0</Statistics_db-len>
517 <Iteration_query-len>1047</Iteration_query-len> 517 <Statistics_hsp-len>29</Statistics_hsp-len>
518 <Iteration_hits></Iteration_hits> 518 <Statistics_eff-space>112346</Statistics_eff-space>
519 <Iteration_stat> 519 <Statistics_kappa>0.041</Statistics_kappa>
520 <Statistics> 520 <Statistics_lambda>0.267</Statistics_lambda>
521 <Statistics_db-num>0</Statistics_db-num> 521 <Statistics_entropy>0.14</Statistics_entropy>
522 <Statistics_db-len>0</Statistics_db-len> 522 </Statistics>
523 <Statistics_hsp-len>29</Statistics_hsp-len> 523 </Iteration_stat>
524 <Statistics_eff-space>102080</Statistics_eff-space> 524 </Iteration>
525 <Statistics_kappa>0.041</Statistics_kappa> 525 <Iteration>
526 <Statistics_lambda>0.267</Statistics_lambda> 526 <Iteration_iter-num>17</Iteration_iter-num>
527 <Statistics_entropy>0.14</Statistics_entropy> 527 <Iteration_query-ID>Query_5</Iteration_query-ID>
528 </Statistics> 528 <Iteration_query-def>gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds</Iteration_query-def>
529 </Iteration_stat> 529 <Iteration_query-len>1047</Iteration_query-len>
530 <Iteration_message>No hits found</Iteration_message> 530 <Iteration_hits>
531 </Iteration> 531 </Iteration_hits>
532 <Iteration> 532 <Iteration_stat>
533 <Iteration_iter-num>18</Iteration_iter-num> 533 <Statistics>
534 <Iteration_query-ID>Query_5</Iteration_query-ID> 534 <Statistics_db-num>0</Statistics_db-num>
535 <Iteration_query-def>gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds</Iteration_query-def> 535 <Statistics_db-len>0</Statistics_db-len>
536 <Iteration_query-len>1047</Iteration_query-len> 536 <Statistics_hsp-len>30</Statistics_hsp-len>
537 <Iteration_hits></Iteration_hits> 537 <Statistics_eff-space>119944</Statistics_eff-space>
538 <Iteration_stat> 538 <Statistics_kappa>0.041</Statistics_kappa>
539 <Statistics> 539 <Statistics_lambda>0.267</Statistics_lambda>
540 <Statistics_db-num>0</Statistics_db-num> 540 <Statistics_entropy>0.14</Statistics_entropy>
541 <Statistics_db-len>0</Statistics_db-len> 541 </Statistics>
542 <Statistics_hsp-len>29</Statistics_hsp-len> 542 </Iteration_stat>
543 <Statistics_eff-space>102080</Statistics_eff-space> 543 <Iteration_message>No hits found</Iteration_message>
544 <Statistics_kappa>0.041</Statistics_kappa> 544 </Iteration>
545 <Statistics_lambda>0.267</Statistics_lambda> 545 <Iteration>
546 <Statistics_entropy>0.14</Statistics_entropy> 546 <Iteration_iter-num>18</Iteration_iter-num>
547 </Statistics> 547 <Iteration_query-ID>Query_5</Iteration_query-ID>
548 </Iteration_stat> 548 <Iteration_query-def>gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds</Iteration_query-def>
549 <Iteration_message>No hits found</Iteration_message> 549 <Iteration_query-len>1047</Iteration_query-len>
550 </Iteration> 550 <Iteration_hits>
551 <Iteration> 551 </Iteration_hits>
552 <Iteration_iter-num>19</Iteration_iter-num> 552 <Iteration_stat>
553 <Iteration_query-ID>Query_5</Iteration_query-ID> 553 <Statistics>
554 <Iteration_query-def>gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds</Iteration_query-def> 554 <Statistics_db-num>0</Statistics_db-num>
555 <Iteration_query-len>1047</Iteration_query-len> 555 <Statistics_db-len>0</Statistics_db-len>
556 <Iteration_hits></Iteration_hits> 556 <Statistics_hsp-len>30</Statistics_hsp-len>
557 <Iteration_stat> 557 <Statistics_eff-space>119944</Statistics_eff-space>
558 <Statistics> 558 <Statistics_kappa>0.041</Statistics_kappa>
559 <Statistics_db-num>0</Statistics_db-num> 559 <Statistics_lambda>0.267</Statistics_lambda>
560 <Statistics_db-len>0</Statistics_db-len> 560 <Statistics_entropy>0.14</Statistics_entropy>
561 <Statistics_hsp-len>29</Statistics_hsp-len> 561 </Statistics>
562 <Statistics_eff-space>102080</Statistics_eff-space> 562 </Iteration_stat>
563 <Statistics_kappa>0.041</Statistics_kappa> 563 <Iteration_message>No hits found</Iteration_message>
564 <Statistics_lambda>0.267</Statistics_lambda> 564 </Iteration>
565 <Statistics_entropy>0.14</Statistics_entropy> 565 <Iteration>
566 </Statistics> 566 <Iteration_iter-num>19</Iteration_iter-num>
567 </Iteration_stat> 567 <Iteration_query-ID>Query_5</Iteration_query-ID>
568 <Iteration_message>No hits found</Iteration_message> 568 <Iteration_query-def>gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds</Iteration_query-def>
569 </Iteration> 569 <Iteration_query-len>1047</Iteration_query-len>
570 <Iteration> 570 <Iteration_hits>
571 <Iteration_iter-num>20</Iteration_iter-num> 571 </Iteration_hits>
572 <Iteration_query-ID>Query_5</Iteration_query-ID> 572 <Iteration_stat>
573 <Iteration_query-def>gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds</Iteration_query-def> 573 <Statistics>
574 <Iteration_query-len>1047</Iteration_query-len> 574 <Statistics_db-num>0</Statistics_db-num>
575 <Iteration_hits> 575 <Statistics_db-len>0</Statistics_db-len>
576 <Hit> 576 <Statistics_hsp-len>30</Statistics_hsp-len>
577 <Hit_num>1</Hit_num> 577 <Statistics_eff-space>119944</Statistics_eff-space>
578 <Hit_id>Subject_4</Hit_id> 578 <Statistics_kappa>0.041</Statistics_kappa>
579 <Hit_def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Hit_def> 579 <Statistics_lambda>0.267</Statistics_lambda>
580 <Hit_accession>Subject_4</Hit_accession> 580 <Statistics_entropy>0.14</Statistics_entropy>
581 <Hit_len>348</Hit_len> 581 </Statistics>
582 <Hit_hsps> 582 </Iteration_stat>
583 <Hsp> 583 <Iteration_message>No hits found</Iteration_message>
584 <Hsp_num>1</Hsp_num> 584 </Iteration>
585 <Hsp_bit-score>641.728</Hsp_bit-score> 585 <Iteration>
586 <Hsp_score>1654</Hsp_score> 586 <Iteration_iter-num>20</Iteration_iter-num>
587 <Hsp_evalue>0</Hsp_evalue> 587 <Iteration_query-ID>Query_5</Iteration_query-ID>
588 <Hsp_query-from>1</Hsp_query-from> 588 <Iteration_query-def>gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds</Iteration_query-def>
589 <Hsp_query-to>1044</Hsp_query-to> 589 <Iteration_query-len>1047</Iteration_query-len>
590 <Hsp_hit-from>1</Hsp_hit-from> 590 <Iteration_hits>
591 <Hsp_hit-to>348</Hsp_hit-to> 591 <Hit>
592 <Hsp_query-frame>1</Hsp_query-frame> 592 <Hit_num>1</Hit_num>
593 <Hsp_hit-frame>0</Hsp_hit-frame> 593 <Hit_id>Subject_4</Hit_id>
594 <Hsp_identity>325</Hsp_identity> 594 <Hit_def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Hit_def>
595 <Hsp_positive>337</Hsp_positive> 595 <Hit_accession>Subject_4</Hit_accession>
596 <Hsp_gaps>0</Hsp_gaps> 596 <Hit_len>348</Hit_len>
597 <Hsp_align-len>348</Hsp_align-len> 597 <Hit_hsps>
598 <Hsp_qseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_qseq> 598 <Hsp>
599 <Hsp_hseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_hseq> 599 <Hsp_num>1</Hsp_num>
600 <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFE PQYYLAEPWQFSMLAAYMFLLI+LGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYT E NNESFVIYMFVVHF IP+I+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGS+FGPIFMTIPAFFAK++A+YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA</Hsp_midline> 600 <Hsp_bit-score>619.387</Hsp_bit-score>
601 </Hsp> 601 <Hsp_score>1596</Hsp_score>
602 </Hit_hsps> 602 <Hsp_evalue>0</Hsp_evalue>
603 </Hit> 603 <Hsp_query-from>1</Hsp_query-from>
604 </Iteration_hits> 604 <Hsp_query-to>1044</Hsp_query-to>
605 <Iteration_stat> 605 <Hsp_hit-from>1</Hsp_hit-from>
606 <Statistics> 606 <Hsp_hit-to>348</Hsp_hit-to>
607 <Statistics_db-num>0</Statistics_db-num> 607 <Hsp_query-frame>1</Hsp_query-frame>
608 <Statistics_db-len>0</Statistics_db-len> 608 <Hsp_hit-frame>0</Hsp_hit-frame>
609 <Statistics_hsp-len>29</Statistics_hsp-len> 609 <Hsp_identity>325</Hsp_identity>
610 <Statistics_eff-space>102080</Statistics_eff-space> 610 <Hsp_positive>337</Hsp_positive>
611 <Statistics_kappa>0.041</Statistics_kappa> 611 <Hsp_gaps>0</Hsp_gaps>
612 <Statistics_lambda>0.267</Statistics_lambda> 612 <Hsp_align-len>348</Hsp_align-len>
613 <Statistics_entropy>0.14</Statistics_entropy> 613 <Hsp_qseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_qseq>
614 </Statistics> 614 <Hsp_hseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_hseq>
615 </Iteration_stat> 615 <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFE PQYYLAEPWQFSMLAAYMFLLI+LGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYT E NNESFVIYMFVVHF IP+I+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGS+FGPIFMTIPAFFAK++A+YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA</Hsp_midline>
616 </Iteration> 616 </Hsp>
617 <Iteration> 617 </Hit_hsps>
618 <Iteration_iter-num>21</Iteration_iter-num> 618 </Hit>
619 <Iteration_query-ID>Query_6</Iteration_query-ID> 619 </Iteration_hits>
620 <Iteration_query-def>gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds</Iteration_query-def> 620 <Iteration_stat>
621 <Iteration_query-len>1344</Iteration_query-len> 621 <Statistics>
622 <Iteration_hits></Iteration_hits> 622 <Statistics_db-num>0</Statistics_db-num>
623 <Iteration_stat> 623 <Statistics_db-len>0</Statistics_db-len>
624 <Statistics> 624 <Statistics_hsp-len>30</Statistics_hsp-len>
625 <Statistics_db-num>0</Statistics_db-num> 625 <Statistics_eff-space>119944</Statistics_eff-space>
626 <Statistics_db-len>0</Statistics_db-len> 626 <Statistics_kappa>0.041</Statistics_kappa>
627 <Statistics_hsp-len>31</Statistics_hsp-len> 627 <Statistics_lambda>0.267</Statistics_lambda>
628 <Statistics_eff-space>132189</Statistics_eff-space> 628 <Statistics_entropy>0.14</Statistics_entropy>
629 <Statistics_kappa>0.041</Statistics_kappa> 629 </Statistics>
630 <Statistics_lambda>0.267</Statistics_lambda> 630 </Iteration_stat>
631 <Statistics_entropy>0.14</Statistics_entropy> 631 </Iteration>
632 </Statistics> 632 <Iteration>
633 </Iteration_stat> 633 <Iteration_iter-num>21</Iteration_iter-num>
634 <Iteration_message>No hits found</Iteration_message> 634 <Iteration_query-ID>Query_6</Iteration_query-ID>
635 </Iteration> 635 <Iteration_query-def>gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds</Iteration_query-def>
636 <Iteration> 636 <Iteration_query-len>1344</Iteration_query-len>
637 <Iteration_iter-num>22</Iteration_iter-num> 637 <Iteration_hits>
638 <Iteration_query-ID>Query_6</Iteration_query-ID> 638 </Iteration_hits>
639 <Iteration_query-def>gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds</Iteration_query-def> 639 <Iteration_stat>
640 <Iteration_query-len>1344</Iteration_query-len> 640 <Statistics>
641 <Iteration_hits></Iteration_hits> 641 <Statistics_db-num>0</Statistics_db-num>
642 <Iteration_stat> 642 <Statistics_db-len>0</Statistics_db-len>
643 <Statistics> 643 <Statistics_hsp-len>32</Statistics_hsp-len>
644 <Statistics_db-num>0</Statistics_db-num> 644 <Statistics_eff-space>155584</Statistics_eff-space>
645 <Statistics_db-len>0</Statistics_db-len> 645 <Statistics_kappa>0.041</Statistics_kappa>
646 <Statistics_hsp-len>31</Statistics_hsp-len> 646 <Statistics_lambda>0.267</Statistics_lambda>
647 <Statistics_eff-space>132189</Statistics_eff-space> 647 <Statistics_entropy>0.14</Statistics_entropy>
648 <Statistics_kappa>0.041</Statistics_kappa> 648 </Statistics>
649 <Statistics_lambda>0.267</Statistics_lambda> 649 </Iteration_stat>
650 <Statistics_entropy>0.14</Statistics_entropy> 650 <Iteration_message>No hits found</Iteration_message>
651 </Statistics> 651 </Iteration>
652 </Iteration_stat> 652 <Iteration>
653 <Iteration_message>No hits found</Iteration_message> 653 <Iteration_iter-num>22</Iteration_iter-num>
654 </Iteration> 654 <Iteration_query-ID>Query_6</Iteration_query-ID>
655 <Iteration> 655 <Iteration_query-def>gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds</Iteration_query-def>
656 <Iteration_iter-num>23</Iteration_iter-num> 656 <Iteration_query-len>1344</Iteration_query-len>
657 <Iteration_query-ID>Query_6</Iteration_query-ID> 657 <Iteration_hits>
658 <Iteration_query-def>gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds</Iteration_query-def> 658 </Iteration_hits>
659 <Iteration_query-len>1344</Iteration_query-len> 659 <Iteration_stat>
660 <Iteration_hits></Iteration_hits> 660 <Statistics>
661 <Iteration_stat> 661 <Statistics_db-num>0</Statistics_db-num>
662 <Statistics> 662 <Statistics_db-len>0</Statistics_db-len>
663 <Statistics_db-num>0</Statistics_db-num> 663 <Statistics_hsp-len>32</Statistics_hsp-len>
664 <Statistics_db-len>0</Statistics_db-len> 664 <Statistics_eff-space>155584</Statistics_eff-space>
665 <Statistics_hsp-len>31</Statistics_hsp-len> 665 <Statistics_kappa>0.041</Statistics_kappa>
666 <Statistics_eff-space>132189</Statistics_eff-space> 666 <Statistics_lambda>0.267</Statistics_lambda>
667 <Statistics_kappa>0.041</Statistics_kappa> 667 <Statistics_entropy>0.14</Statistics_entropy>
668 <Statistics_lambda>0.267</Statistics_lambda> 668 </Statistics>
669 <Statistics_entropy>0.14</Statistics_entropy> 669 </Iteration_stat>
670 </Statistics> 670 <Iteration_message>No hits found</Iteration_message>
671 </Iteration_stat> 671 </Iteration>
672 <Iteration_message>No hits found</Iteration_message> 672 <Iteration>
673 </Iteration> 673 <Iteration_iter-num>23</Iteration_iter-num>
674 <Iteration> 674 <Iteration_query-ID>Query_6</Iteration_query-ID>
675 <Iteration_iter-num>24</Iteration_iter-num> 675 <Iteration_query-def>gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds</Iteration_query-def>
676 <Iteration_query-ID>Query_6</Iteration_query-ID> 676 <Iteration_query-len>1344</Iteration_query-len>
677 <Iteration_query-def>gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds</Iteration_query-def> 677 <Iteration_hits>
678 <Iteration_query-len>1344</Iteration_query-len> 678 </Iteration_hits>
679 <Iteration_hits> 679 <Iteration_stat>
680 <Hit> 680 <Statistics>
681 <Hit_num>1</Hit_num> 681 <Statistics_db-num>0</Statistics_db-num>
682 <Hit_id>Subject_4</Hit_id> 682 <Statistics_db-len>0</Statistics_db-len>
683 <Hit_def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Hit_def> 683 <Statistics_hsp-len>32</Statistics_hsp-len>
684 <Hit_accession>Subject_4</Hit_accession> 684 <Statistics_eff-space>155584</Statistics_eff-space>
685 <Hit_len>348</Hit_len> 685 <Statistics_kappa>0.041</Statistics_kappa>
686 <Hit_hsps> 686 <Statistics_lambda>0.267</Statistics_lambda>
687 <Hsp> 687 <Statistics_entropy>0.14</Statistics_entropy>
688 <Hsp_num>1</Hsp_num> 688 </Statistics>
689 <Hsp_bit-score>559.296</Hsp_bit-score> 689 </Iteration_stat>
690 <Hsp_score>1440</Hsp_score> 690 <Iteration_message>No hits found</Iteration_message>
691 <Hsp_evalue>0</Hsp_evalue> 691 </Iteration>
692 <Hsp_query-from>23</Hsp_query-from> 692 <Iteration>
693 <Hsp_query-to>1018</Hsp_query-to> 693 <Iteration_iter-num>24</Iteration_iter-num>
694 <Hsp_hit-from>1</Hsp_hit-from> 694 <Iteration_query-ID>Query_6</Iteration_query-ID>
695 <Hsp_hit-to>332</Hsp_hit-to> 695 <Iteration_query-def>gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds</Iteration_query-def>
696 <Hsp_query-frame>2</Hsp_query-frame> 696 <Iteration_query-len>1344</Iteration_query-len>
697 <Hsp_hit-frame>0</Hsp_hit-frame> 697 <Iteration_hits>
698 <Hsp_identity>272</Hsp_identity> 698 <Hit>
699 <Hsp_positive>307</Hsp_positive> 699 <Hit_num>1</Hit_num>
700 <Hsp_gaps>0</Hsp_gaps> 700 <Hit_id>Subject_4</Hit_id>
701 <Hsp_align-len>332</Hsp_align-len> 701 <Hit_def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Hit_def>
702 <Hsp_qseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKXXXXXXXXXXXXXXXXXXVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEED</Hsp_qseq> 702 <Hit_accession>Subject_4</Hit_accession>
703 <Hsp_hseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDE</Hsp_hseq> 703 <Hit_len>348</Hit_len>
704 <Hsp_midline>MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLYVT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLGGEIALW LVVLAIER++VVCKP++NFRFGE+HAIMGV TW MALACA PPL GWSRYIPEGLQCSCGIDYYT P +NNESFVIYMF HF+IP+ +I FCYG+LV TVKEAAAQQQES TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA+YIFTHQGS FGPIFMTIP+FFAKS+A+YNP+IYI MNKQFR+CM+TT+CCGKNP +++</Hsp_midline> 704 <Hit_hsps>
705 </Hsp> 705 <Hsp>
706 </Hit_hsps> 706 <Hsp_num>1</Hsp_num>
707 </Hit> 707 <Hsp_bit-score>532.717</Hsp_bit-score>
708 </Iteration_hits> 708 <Hsp_score>1371</Hsp_score>
709 <Iteration_stat> 709 <Hsp_evalue>0</Hsp_evalue>
710 <Statistics> 710 <Hsp_query-from>23</Hsp_query-from>
711 <Statistics_db-num>0</Statistics_db-num> 711 <Hsp_query-to>1021</Hsp_query-to>
712 <Statistics_db-len>0</Statistics_db-len> 712 <Hsp_hit-from>1</Hsp_hit-from>
713 <Statistics_hsp-len>31</Statistics_hsp-len> 713 <Hsp_hit-to>333</Hsp_hit-to>
714 <Statistics_eff-space>132189</Statistics_eff-space> 714 <Hsp_query-frame>2</Hsp_query-frame>
715 <Statistics_kappa>0.041</Statistics_kappa> 715 <Hsp_hit-frame>0</Hsp_hit-frame>
716 <Statistics_lambda>0.267</Statistics_lambda> 716 <Hsp_identity>272</Hsp_identity>
717 <Statistics_entropy>0.14</Statistics_entropy> 717 <Hsp_positive>307</Hsp_positive>
718 </Statistics> 718 <Hsp_gaps>0</Hsp_gaps>
719 </Iteration_stat> 719 <Hsp_align-len>333</Hsp_align-len>
720 </Iteration> 720 <Hsp_qseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKXXXXXXXXXXXXXXXXXXVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDG</Hsp_qseq>
721 </BlastOutput_iterations> 721 <Hsp_hseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEA</Hsp_hseq>
722 <Hsp_midline>MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLYVT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLGGEIALW LVVLAIER++VVCKP++NFRFGE+HAIMGV TW MALACA PPL GWSRYIPEGLQCSCGIDYYT P +NNESFVIYMF HF+IP+ +I FCYG+LV TVKEAAAQQQES TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA+YIFTHQGS FGPIFMTIP+FFAKS+A+YNP+IYI MNKQFR+CM+TT+CCGKNP +++ </Hsp_midline>
723 </Hsp>
724 </Hit_hsps>
725 </Hit>
726 </Iteration_hits>
727 <Iteration_stat>
728 <Statistics>
729 <Statistics_db-num>0</Statistics_db-num>
730 <Statistics_db-len>0</Statistics_db-len>
731 <Statistics_hsp-len>32</Statistics_hsp-len>
732 <Statistics_eff-space>155584</Statistics_eff-space>
733 <Statistics_kappa>0.041</Statistics_kappa>
734 <Statistics_lambda>0.267</Statistics_lambda>
735 <Statistics_entropy>0.14</Statistics_entropy>
736 </Statistics>
737 </Iteration_stat>
738 </Iteration>
739 </BlastOutput_iterations>
722 </BlastOutput> 740 </BlastOutput>
741