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comparison test-data/blastn_chimera_vs_three_human_max1.txt @ 29:5edc472ec434 draft

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"Updated to 2.10.1+galaxy0"
author peterjc
date Thu, 10 Sep 2020 13:23:34 +0000
parents 87a7ee4cb36f
children a52d2d93e595
comparison
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28:87a7ee4cb36f 29:5edc472ec434
1 BLASTN 2.9.0+ 1 BLASTN 2.10.1+
2 2
3 3
4 Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb 4 Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
5 Miller (2000), "A greedy algorithm for aligning DNA sequences", J 5 Miller (2000), "A greedy algorithm for aligning DNA sequences", J
6 Comput Biol 2000; 7(1-2):203-14. 6 Comput Biol 2000; 7(1-2):203-14.
13 13
14 14
15 Query= chimera chunks of AB011145 plus M10051 plus BC112106 15 Query= chimera chunks of AB011145 plus M10051 plus BC112106
16 16
17 Length=9973 17 Length=9973
18 Score E 18 Score E
19 Sequences producing significant alignments: (Bits) Value 19 Sequences producing significant alignments: (Bits) Value
20 20
21 ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, p... 8421 0.0 21 ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, p... 8421 0.0
22 22
23 23
24 >ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein, 24 >ENA|AB011145|AB011145.1 Homo sapiens mRNA for KIAA0573 protein,
25 partial cds. 25 partial cds.
26 Length=4796 26 Length=4796
344 344
345 Effective search space used: 106299490 345 Effective search space used: 106299490
346 346
347 347
348 Database: Just 3 human mRNA sequences 348 Database: Just 3 human mRNA sequences
349 Posted date: Apr 23, 2020 3:16 PM 349 Posted date: Sep 9, 2020 11:23 PM
350 Number of letters in database: 10,732 350 Number of letters in database: 10,732
351 Number of sequences in database: 3 351 Number of sequences in database: 3
352 352
353 353
354 354