Mercurial > repos > devteam > ncbi_blast_plus

diff test-data/tblastn_four_human_vs_rhodopsin.xml @ 11:4c4a0da938ff draft

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Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25. Supports $GALAXY_SLOTS. Includes more tests and heavy use of macros.
author peterjc
date Thu, 05 Dec 2013 06:55:59 -0500
parents 1f546099212f
children 623f727cdff1
line wrap: on
line diff
--- a/test-data/tblastn_four_human_vs_rhodopsin.xml	Mon Sep 23 06:14:13 2013 -0400
+++ b/test-data/tblastn_four_human_vs_rhodopsin.xml	Thu Dec 05 06:55:59 2013 -0500
@@ -2,7 +2,7 @@
 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
 <BlastOutput>
   <BlastOutput_program>tblastn</BlastOutput_program>
-  <BlastOutput_version>TBLASTN 2.2.26+</BlastOutput_version>
+  <BlastOutput_version>TBLASTN 2.2.28+</BlastOutput_version>
   <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
   <BlastOutput_db></BlastOutput_db>
   <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
@@ -17,706 +17,725 @@
       <Parameters_filter>F</Parameters_filter>
     </Parameters>
   </BlastOutput_param>
-  <BlastOutput_iterations>
-    <Iteration>
-      <Iteration_iter-num>1</Iteration_iter-num>
-      <Iteration_query-ID>Query_1</Iteration_query-ID>
-      <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
-      <Iteration_query-len>406</Iteration_query-len>
-      <Iteration_hits></Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>19</Statistics_hsp-len>
-          <Statistics_eff-space>127710</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-      <Iteration_message>No hits found</Iteration_message>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>2</Iteration_iter-num>
-      <Iteration_query-ID>Query_1</Iteration_query-ID>
-      <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
-      <Iteration_query-len>406</Iteration_query-len>
-      <Iteration_hits></Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>19</Statistics_hsp-len>
-          <Statistics_eff-space>127710</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-      <Iteration_message>No hits found</Iteration_message>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>3</Iteration_iter-num>
-      <Iteration_query-ID>Query_1</Iteration_query-ID>
-      <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
-      <Iteration_query-len>406</Iteration_query-len>
-      <Iteration_hits></Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>19</Statistics_hsp-len>
-          <Statistics_eff-space>127710</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-      <Iteration_message>No hits found</Iteration_message>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>4</Iteration_iter-num>
-      <Iteration_query-ID>Query_1</Iteration_query-ID>
-      <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
-      <Iteration_query-len>406</Iteration_query-len>
-      <Iteration_hits></Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>19</Statistics_hsp-len>
-          <Statistics_eff-space>127710</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-      <Iteration_message>No hits found</Iteration_message>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>5</Iteration_iter-num>
-      <Iteration_query-ID>Query_1</Iteration_query-ID>
-      <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
-      <Iteration_query-len>406</Iteration_query-len>
-      <Iteration_hits></Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>19</Statistics_hsp-len>
-          <Statistics_eff-space>127710</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-      <Iteration_message>No hits found</Iteration_message>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>6</Iteration_iter-num>
-      <Iteration_query-ID>Query_1</Iteration_query-ID>
-      <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
-      <Iteration_query-len>406</Iteration_query-len>
-      <Iteration_hits></Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>19</Statistics_hsp-len>
-          <Statistics_eff-space>127710</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-      <Iteration_message>No hits found</Iteration_message>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>7</Iteration_iter-num>
-      <Iteration_query-ID>Query_2</Iteration_query-ID>
-      <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
-      <Iteration_query-len>1161</Iteration_query-len>
-      <Iteration_hits></Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>23</Statistics_hsp-len>
-          <Statistics_eff-space>370988</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-      <Iteration_message>No hits found</Iteration_message>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>8</Iteration_iter-num>
-      <Iteration_query-ID>Query_2</Iteration_query-ID>
-      <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
-      <Iteration_query-len>1161</Iteration_query-len>
-      <Iteration_hits></Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>23</Statistics_hsp-len>
-          <Statistics_eff-space>370988</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-      <Iteration_message>No hits found</Iteration_message>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>9</Iteration_iter-num>
-      <Iteration_query-ID>Query_2</Iteration_query-ID>
-      <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
-      <Iteration_query-len>1161</Iteration_query-len>
-      <Iteration_hits></Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>23</Statistics_hsp-len>
-          <Statistics_eff-space>370988</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-      <Iteration_message>No hits found</Iteration_message>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>10</Iteration_iter-num>
-      <Iteration_query-ID>Query_2</Iteration_query-ID>
-      <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
-      <Iteration_query-len>1161</Iteration_query-len>
-      <Iteration_hits></Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>23</Statistics_hsp-len>
-          <Statistics_eff-space>370988</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-      <Iteration_message>No hits found</Iteration_message>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>11</Iteration_iter-num>
-      <Iteration_query-ID>Query_2</Iteration_query-ID>
-      <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
-      <Iteration_query-len>1161</Iteration_query-len>
-      <Iteration_hits></Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>23</Statistics_hsp-len>
-          <Statistics_eff-space>370988</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-      <Iteration_message>No hits found</Iteration_message>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>12</Iteration_iter-num>
-      <Iteration_query-ID>Query_2</Iteration_query-ID>
-      <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
-      <Iteration_query-len>1161</Iteration_query-len>
-      <Iteration_hits></Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>23</Statistics_hsp-len>
-          <Statistics_eff-space>370988</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-      <Iteration_message>No hits found</Iteration_message>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>13</Iteration_iter-num>
-      <Iteration_query-ID>Query_3</Iteration_query-ID>
-      <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
-      <Iteration_query-len>1382</Iteration_query-len>
-      <Iteration_hits></Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>24</Statistics_hsp-len>
-          <Statistics_eff-space>441350</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-      <Iteration_message>No hits found</Iteration_message>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>14</Iteration_iter-num>
-      <Iteration_query-ID>Query_3</Iteration_query-ID>
-      <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
-      <Iteration_query-len>1382</Iteration_query-len>
-      <Iteration_hits></Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>24</Statistics_hsp-len>
-          <Statistics_eff-space>441350</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-      <Iteration_message>No hits found</Iteration_message>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>15</Iteration_iter-num>
-      <Iteration_query-ID>Query_3</Iteration_query-ID>
-      <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
-      <Iteration_query-len>1382</Iteration_query-len>
-      <Iteration_hits></Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>24</Statistics_hsp-len>
-          <Statistics_eff-space>441350</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-      <Iteration_message>No hits found</Iteration_message>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>16</Iteration_iter-num>
-      <Iteration_query-ID>Query_3</Iteration_query-ID>
-      <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
-      <Iteration_query-len>1382</Iteration_query-len>
-      <Iteration_hits></Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>24</Statistics_hsp-len>
-          <Statistics_eff-space>441350</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-      <Iteration_message>No hits found</Iteration_message>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>17</Iteration_iter-num>
-      <Iteration_query-ID>Query_3</Iteration_query-ID>
-      <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
-      <Iteration_query-len>1382</Iteration_query-len>
-      <Iteration_hits></Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>24</Statistics_hsp-len>
-          <Statistics_eff-space>441350</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-      <Iteration_message>No hits found</Iteration_message>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>18</Iteration_iter-num>
-      <Iteration_query-ID>Query_3</Iteration_query-ID>
-      <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
-      <Iteration_query-len>1382</Iteration_query-len>
-      <Iteration_hits></Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>24</Statistics_hsp-len>
-          <Statistics_eff-space>441350</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-      <Iteration_message>No hits found</Iteration_message>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>19</Iteration_iter-num>
-      <Iteration_query-ID>Query_4</Iteration_query-ID>
-      <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
-      <Iteration_query-len>348</Iteration_query-len>
-      <Iteration_hits>
-        <Hit>
-          <Hit_num>1</Hit_num>
-          <Hit_id>Subject_1</Hit_id>
-          <Hit_def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</Hit_def>
-          <Hit_accession>Subject_1</Hit_accession>
-          <Hit_len>1047</Hit_len>
-          <Hit_hsps>
-            <Hsp>
-              <Hsp_num>1</Hsp_num>
-              <Hsp_bit-score>732.393</Hsp_bit-score>
-              <Hsp_score>1689</Hsp_score>
-              <Hsp_evalue>0</Hsp_evalue>
-              <Hsp_query-from>1</Hsp_query-from>
-              <Hsp_query-to>348</Hsp_query-to>
-              <Hsp_hit-from>1</Hsp_hit-from>
-              <Hsp_hit-to>1044</Hsp_hit-to>
-              <Hsp_query-frame>0</Hsp_query-frame>
-              <Hsp_hit-frame>1</Hsp_hit-frame>
-              <Hsp_identity>336</Hsp_identity>
-              <Hsp_positive>343</Hsp_positive>
-              <Hsp_gaps>0</Hsp_gaps>
-              <Hsp_align-len>348</Hsp_align-len>
-              <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_qseq>
-              <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_hseq>
-              <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA</Hsp_midline>
-            </Hsp>
-          </Hit_hsps>
-        </Hit>
-      </Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>18</Statistics_hsp-len>
-          <Statistics_eff-space>109230</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>20</Iteration_iter-num>
-      <Iteration_query-ID>Query_4</Iteration_query-ID>
-      <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
-      <Iteration_query-len>348</Iteration_query-len>
-      <Iteration_hits>
-        <Hit>
-          <Hit_num>1</Hit_num>
-          <Hit_id>Subject_2</Hit_id>
-          <Hit_def>gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds</Hit_def>
-          <Hit_accession>Subject_2</Hit_accession>
-          <Hit_len>1574</Hit_len>
-          <Hit_hsps>
-            <Hsp>
-              <Hsp_num>1</Hsp_num>
-              <Hsp_bit-score>646.12</Hsp_bit-score>
-              <Hsp_score>1489</Hsp_score>
-              <Hsp_evalue>0</Hsp_evalue>
-              <Hsp_query-from>1</Hsp_query-from>
-              <Hsp_query-to>341</Hsp_query-to>
-              <Hsp_hit-from>42</Hsp_hit-from>
-              <Hsp_hit-to>1067</Hsp_hit-to>
-              <Hsp_query-frame>0</Hsp_query-frame>
-              <Hsp_hit-frame>3</Hsp_hit-frame>
-              <Hsp_identity>290</Hsp_identity>
-              <Hsp_positive>320</Hsp_positive>
-              <Hsp_gaps>1</Hsp_gaps>
-              <Hsp_align-len>342</Hsp_align-len>
-              <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEA-SATVSKTE</Hsp_qseq>
-              <Hsp_hseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTE</Hsp_hseq>
-              <Hsp_midline>MNGTEGPNFY+P SN TGVVRSPFEYPQYYLAEPWQ+S+L AYMFLLI+LGFPINF+TLYVT+QHKKLRTPLNYILLNLA A+ FMVL GFT T+Y+S+ GYF+ G TGC +EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF ENHA+MGVAFTW+MAL+CA PPL GWSRYIPEG+QCSCG+DYYTLKPEVNNESFVIYMFVVHFTIP+IIIFFCYG+LV TVKEAAAQQQESATTQKAEKEVTRMVIIMV+ FLICWVPYASVAF+IF+ QGS FGPIFMT+PAFFAKS++IYNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+A SA  SKTE</Hsp_midline>
-            </Hsp>
-          </Hit_hsps>
-        </Hit>
-      </Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>18</Statistics_hsp-len>
-          <Statistics_eff-space>109230</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>21</Iteration_iter-num>
-      <Iteration_query-ID>Query_4</Iteration_query-ID>
-      <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
-      <Iteration_query-len>348</Iteration_query-len>
-      <Iteration_hits>
-        <Hit>
-          <Hit_num>1</Hit_num>
-          <Hit_id>Subject_3</Hit_id>
-          <Hit_def>gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds</Hit_def>
-          <Hit_accession>Subject_3</Hit_accession>
-          <Hit_len>4301</Hit_len>
-          <Hit_hsps>
-            <Hsp>
-              <Hsp_num>1</Hsp_num>
-              <Hsp_bit-score>151.343</Hsp_bit-score>
-              <Hsp_score>342</Hsp_score>
-              <Hsp_evalue>1.39567e-72</Hsp_evalue>
-              <Hsp_query-from>239</Hsp_query-from>
-              <Hsp_query-to>312</Hsp_query-to>
-              <Hsp_hit-from>3147</Hsp_hit-from>
-              <Hsp_hit-to>3368</Hsp_hit-to>
-              <Hsp_query-frame>0</Hsp_query-frame>
-              <Hsp_hit-frame>3</Hsp_hit-frame>
-              <Hsp_identity>69</Hsp_identity>
-              <Hsp_positive>73</Hsp_positive>
-              <Hsp_gaps>0</Hsp_gaps>
-              <Hsp_align-len>74</Hsp_align-len>
-              <Hsp_qseq>ESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQ</Hsp_qseq>
-              <Hsp_hseq>ESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQ</Hsp_hseq>
-              <Hsp_midline>ESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQ</Hsp_midline>
-            </Hsp>
-            <Hsp>
-              <Hsp_num>2</Hsp_num>
-              <Hsp_bit-score>126.324</Hsp_bit-score>
-              <Hsp_score>284</Hsp_score>
-              <Hsp_evalue>1.39567e-72</Hsp_evalue>
-              <Hsp_query-from>177</Hsp_query-from>
-              <Hsp_query-to>235</Hsp_query-to>
-              <Hsp_hit-from>2855</Hsp_hit-from>
-              <Hsp_hit-to>3031</Hsp_hit-to>
-              <Hsp_query-frame>0</Hsp_query-frame>
-              <Hsp_hit-frame>2</Hsp_hit-frame>
-              <Hsp_identity>54</Hsp_identity>
-              <Hsp_positive>57</Hsp_positive>
-              <Hsp_gaps>0</Hsp_gaps>
-              <Hsp_align-len>59</Hsp_align-len>
-              <Hsp_qseq>RYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAA</Hsp_qseq>
-              <Hsp_hseq>RYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEVRS</Hsp_hseq>
-              <Hsp_midline>RYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKE  +</Hsp_midline>
-            </Hsp>
-            <Hsp>
-              <Hsp_num>3</Hsp_num>
-              <Hsp_bit-score>229.42</Hsp_bit-score>
-              <Hsp_score>523</Hsp_score>
-              <Hsp_evalue>9.34154e-67</Hsp_evalue>
-              <Hsp_query-from>11</Hsp_query-from>
-              <Hsp_query-to>121</Hsp_query-to>
-              <Hsp_hit-from>1</Hsp_hit-from>
-              <Hsp_hit-to>333</Hsp_hit-to>
-              <Hsp_query-frame>0</Hsp_query-frame>
-              <Hsp_hit-frame>1</Hsp_hit-frame>
-              <Hsp_identity>107</Hsp_identity>
-              <Hsp_positive>109</Hsp_positive>
-              <Hsp_gaps>0</Hsp_gaps>
-              <Hsp_align-len>111</Hsp_align-len>
-              <Hsp_qseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_qseq>
-              <Hsp_hseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_hseq>
-              <Hsp_midline>VPFSN TGVVRSPFE+PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_midline>
-            </Hsp>
-            <Hsp>
-              <Hsp_num>4</Hsp_num>
-              <Hsp_bit-score>122.873</Hsp_bit-score>
-              <Hsp_score>276</Hsp_score>
-              <Hsp_evalue>1.03783e-32</Hsp_evalue>
-              <Hsp_query-from>119</Hsp_query-from>
-              <Hsp_query-to>177</Hsp_query-to>
-              <Hsp_hit-from>1404</Hsp_hit-from>
-              <Hsp_hit-to>1580</Hsp_hit-to>
-              <Hsp_query-frame>0</Hsp_query-frame>
-              <Hsp_hit-frame>3</Hsp_hit-frame>
-              <Hsp_identity>55</Hsp_identity>
-              <Hsp_positive>56</Hsp_positive>
-              <Hsp_gaps>0</Hsp_gaps>
-              <Hsp_align-len>59</Hsp_align-len>
-              <Hsp_qseq>LGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSR</Hsp_qseq>
-              <Hsp_hseq>LAGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSR</Hsp_hseq>
-              <Hsp_midline>L GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+A TWVMALACAAPPL GWSR</Hsp_midline>
-            </Hsp>
-            <Hsp>
-              <Hsp_num>5</Hsp_num>
-              <Hsp_bit-score>57.7368</Hsp_bit-score>
-              <Hsp_score>125</Hsp_score>
-              <Hsp_evalue>1.50808e-12</Hsp_evalue>
-              <Hsp_query-from>312</Hsp_query-from>
-              <Hsp_query-to>337</Hsp_query-to>
-              <Hsp_hit-from>4222</Hsp_hit-from>
-              <Hsp_hit-to>4299</Hsp_hit-to>
-              <Hsp_query-frame>0</Hsp_query-frame>
-              <Hsp_hit-frame>1</Hsp_hit-frame>
-              <Hsp_identity>23</Hsp_identity>
-              <Hsp_positive>24</Hsp_positive>
-              <Hsp_gaps>0</Hsp_gaps>
-              <Hsp_align-len>26</Hsp_align-len>
-              <Hsp_qseq>QFRNCMLTTICCGKNPLGDDEASATV</Hsp_qseq>
-              <Hsp_hseq>QFRNCMLTTLCCGKNPLGDDEASTTA</Hsp_hseq>
-              <Hsp_midline>QFRNCMLTT+CCGKNPLGDDEAS T </Hsp_midline>
-            </Hsp>
-          </Hit_hsps>
-        </Hit>
-      </Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>18</Statistics_hsp-len>
-          <Statistics_eff-space>109230</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>22</Iteration_iter-num>
-      <Iteration_query-ID>Query_4</Iteration_query-ID>
-      <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
-      <Iteration_query-len>348</Iteration_query-len>
-      <Iteration_hits>
-        <Hit>
-          <Hit_num>1</Hit_num>
-          <Hit_id>Subject_4</Hit_id>
-          <Hit_def>gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds</Hit_def>
-          <Hit_accession>Subject_4</Hit_accession>
-          <Hit_len>983</Hit_len>
-          <Hit_hsps>
-            <Hsp>
-              <Hsp_num>1</Hsp_num>
-              <Hsp_bit-score>658.198</Hsp_bit-score>
-              <Hsp_score>1517</Hsp_score>
-              <Hsp_evalue>0</Hsp_evalue>
-              <Hsp_query-from>11</Hsp_query-from>
-              <Hsp_query-to>336</Hsp_query-to>
-              <Hsp_hit-from>1</Hsp_hit-from>
-              <Hsp_hit-to>978</Hsp_hit-to>
-              <Hsp_query-frame>0</Hsp_query-frame>
-              <Hsp_hit-frame>1</Hsp_hit-frame>
-              <Hsp_identity>310</Hsp_identity>
-              <Hsp_positive>322</Hsp_positive>
-              <Hsp_gaps>0</Hsp_gaps>
-              <Hsp_align-len>326</Hsp_align-len>
-              <Hsp_qseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASAT</Hsp_qseq>
-              <Hsp_hseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTT</Hsp_hseq>
-              <Hsp_midline>VPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMV GGFT+TLYTS+HGYFVFG TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+AFTWVMALACAAPPLAGWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMV+AFLICW+PYASVAFYIFTHQGSNFGP+FMTIPAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T</Hsp_midline>
-            </Hsp>
-          </Hit_hsps>
-        </Hit>
-      </Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>18</Statistics_hsp-len>
-          <Statistics_eff-space>109230</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>23</Iteration_iter-num>
-      <Iteration_query-ID>Query_4</Iteration_query-ID>
-      <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
-      <Iteration_query-len>348</Iteration_query-len>
-      <Iteration_hits>
-        <Hit>
-          <Hit_num>1</Hit_num>
-          <Hit_id>Subject_5</Hit_id>
-          <Hit_def>gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds</Hit_def>
-          <Hit_accession>Subject_5</Hit_accession>
-          <Hit_len>1047</Hit_len>
-          <Hit_hsps>
-            <Hsp>
-              <Hsp_num>1</Hsp_num>
-              <Hsp_bit-score>711.256</Hsp_bit-score>
-              <Hsp_score>1640</Hsp_score>
-              <Hsp_evalue>0</Hsp_evalue>
-              <Hsp_query-from>1</Hsp_query-from>
-              <Hsp_query-to>348</Hsp_query-to>
-              <Hsp_hit-from>1</Hsp_hit-from>
-              <Hsp_hit-to>1044</Hsp_hit-to>
-              <Hsp_query-frame>0</Hsp_query-frame>
-              <Hsp_hit-frame>1</Hsp_hit-frame>
-              <Hsp_identity>325</Hsp_identity>
-              <Hsp_positive>337</Hsp_positive>
-              <Hsp_gaps>0</Hsp_gaps>
-              <Hsp_align-len>348</Hsp_align-len>
-              <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_qseq>
-              <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_hseq>
-              <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFE PQYYLAEPWQFSMLAAYMFLLI+LGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYT   E NNESFVIYMFVVHF IP+I+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGS+FGPIFMTIPAFFAK++A+YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA</Hsp_midline>
-            </Hsp>
-          </Hit_hsps>
-        </Hit>
-      </Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>18</Statistics_hsp-len>
-          <Statistics_eff-space>109230</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-    </Iteration>
-    <Iteration>
-      <Iteration_iter-num>24</Iteration_iter-num>
-      <Iteration_query-ID>Query_4</Iteration_query-ID>
-      <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
-      <Iteration_query-len>348</Iteration_query-len>
-      <Iteration_hits>
-        <Hit>
-          <Hit_num>1</Hit_num>
-          <Hit_id>Subject_6</Hit_id>
-          <Hit_def>gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds</Hit_def>
-          <Hit_accession>Subject_6</Hit_accession>
-          <Hit_len>1344</Hit_len>
-          <Hit_hsps>
-            <Hsp>
-              <Hsp_num>1</Hsp_num>
-              <Hsp_bit-score>626.708</Hsp_bit-score>
-              <Hsp_score>1444</Hsp_score>
-              <Hsp_evalue>0</Hsp_evalue>
-              <Hsp_query-from>1</Hsp_query-from>
-              <Hsp_query-to>341</Hsp_query-to>
-              <Hsp_hit-from>23</Hsp_hit-from>
-              <Hsp_hit-to>1048</Hsp_hit-to>
-              <Hsp_query-frame>0</Hsp_query-frame>
-              <Hsp_hit-frame>2</Hsp_hit-frame>
-              <Hsp_identity>281</Hsp_identity>
-              <Hsp_positive>311</Hsp_positive>
-              <Hsp_gaps>1</Hsp_gaps>
-              <Hsp_align-len>342</Hsp_align-len>
-              <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPL-GDDEASATVSKTE</Hsp_qseq>
-              <Hsp_hseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTE</Hsp_hseq>
-              <Hsp_midline>MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLYVT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLGGEIALW LVVLAIER++VVCKP++NFRFGE HAIMGV  TW MALACA PPL GWSRYIPEGLQCSCGIDYYT  P +NNESFVIYMF  HF+IP+ +I FCYG+LV TVKEAAAQQQES TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA YIFTHQGS FGPIFMTIP+FFAKS+A+YNP+IYI MNKQFR CM+TT+CCGKNP   +D ASAT SKTE</Hsp_midline>
-            </Hsp>
-          </Hit_hsps>
-        </Hit>
-      </Iteration_hits>
-      <Iteration_stat>
-        <Statistics>
-          <Statistics_db-num>0</Statistics_db-num>
-          <Statistics_db-len>0</Statistics_db-len>
-          <Statistics_hsp-len>18</Statistics_hsp-len>
-          <Statistics_eff-space>109230</Statistics_eff-space>
-          <Statistics_kappa>0.071</Statistics_kappa>
-          <Statistics_lambda>0.299</Statistics_lambda>
-          <Statistics_entropy>0.27</Statistics_entropy>
-        </Statistics>
-      </Iteration_stat>
-    </Iteration>
-  </BlastOutput_iterations>
-</BlastOutput>
\ No newline at end of file
+<BlastOutput_iterations>
+<Iteration>
+  <Iteration_iter-num>1</Iteration_iter-num>
+  <Iteration_query-ID>Query_1</Iteration_query-ID>
+  <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
+  <Iteration_query-len>406</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>19</Statistics_hsp-len>
+      <Statistics_eff-space>127710</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>2</Iteration_iter-num>
+  <Iteration_query-ID>Query_1</Iteration_query-ID>
+  <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
+  <Iteration_query-len>406</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>19</Statistics_hsp-len>
+      <Statistics_eff-space>127710</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>3</Iteration_iter-num>
+  <Iteration_query-ID>Query_1</Iteration_query-ID>
+  <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
+  <Iteration_query-len>406</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>19</Statistics_hsp-len>
+      <Statistics_eff-space>127710</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>4</Iteration_iter-num>
+  <Iteration_query-ID>Query_1</Iteration_query-ID>
+  <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
+  <Iteration_query-len>406</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>19</Statistics_hsp-len>
+      <Statistics_eff-space>127710</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>5</Iteration_iter-num>
+  <Iteration_query-ID>Query_1</Iteration_query-ID>
+  <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
+  <Iteration_query-len>406</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>19</Statistics_hsp-len>
+      <Statistics_eff-space>127710</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>6</Iteration_iter-num>
+  <Iteration_query-ID>Query_1</Iteration_query-ID>
+  <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
+  <Iteration_query-len>406</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>19</Statistics_hsp-len>
+      <Statistics_eff-space>127710</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>7</Iteration_iter-num>
+  <Iteration_query-ID>Query_2</Iteration_query-ID>
+  <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
+  <Iteration_query-len>1161</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>23</Statistics_hsp-len>
+      <Statistics_eff-space>370988</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>8</Iteration_iter-num>
+  <Iteration_query-ID>Query_2</Iteration_query-ID>
+  <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
+  <Iteration_query-len>1161</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>23</Statistics_hsp-len>
+      <Statistics_eff-space>370988</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>9</Iteration_iter-num>
+  <Iteration_query-ID>Query_2</Iteration_query-ID>
+  <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
+  <Iteration_query-len>1161</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>23</Statistics_hsp-len>
+      <Statistics_eff-space>370988</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>10</Iteration_iter-num>
+  <Iteration_query-ID>Query_2</Iteration_query-ID>
+  <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
+  <Iteration_query-len>1161</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>23</Statistics_hsp-len>
+      <Statistics_eff-space>370988</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>11</Iteration_iter-num>
+  <Iteration_query-ID>Query_2</Iteration_query-ID>
+  <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
+  <Iteration_query-len>1161</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>23</Statistics_hsp-len>
+      <Statistics_eff-space>370988</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>12</Iteration_iter-num>
+  <Iteration_query-ID>Query_2</Iteration_query-ID>
+  <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
+  <Iteration_query-len>1161</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>23</Statistics_hsp-len>
+      <Statistics_eff-space>370988</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>13</Iteration_iter-num>
+  <Iteration_query-ID>Query_3</Iteration_query-ID>
+  <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
+  <Iteration_query-len>1382</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>24</Statistics_hsp-len>
+      <Statistics_eff-space>441350</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>14</Iteration_iter-num>
+  <Iteration_query-ID>Query_3</Iteration_query-ID>
+  <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
+  <Iteration_query-len>1382</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>24</Statistics_hsp-len>
+      <Statistics_eff-space>441350</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>15</Iteration_iter-num>
+  <Iteration_query-ID>Query_3</Iteration_query-ID>
+  <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
+  <Iteration_query-len>1382</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>24</Statistics_hsp-len>
+      <Statistics_eff-space>441350</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>16</Iteration_iter-num>
+  <Iteration_query-ID>Query_3</Iteration_query-ID>
+  <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
+  <Iteration_query-len>1382</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>24</Statistics_hsp-len>
+      <Statistics_eff-space>441350</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>17</Iteration_iter-num>
+  <Iteration_query-ID>Query_3</Iteration_query-ID>
+  <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
+  <Iteration_query-len>1382</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>24</Statistics_hsp-len>
+      <Statistics_eff-space>441350</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>18</Iteration_iter-num>
+  <Iteration_query-ID>Query_3</Iteration_query-ID>
+  <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
+  <Iteration_query-len>1382</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>24</Statistics_hsp-len>
+      <Statistics_eff-space>441350</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>19</Iteration_iter-num>
+  <Iteration_query-ID>Query_4</Iteration_query-ID>
+  <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
+  <Iteration_query-len>348</Iteration_query-len>
+<Iteration_hits>
+<Hit>
+  <Hit_num>1</Hit_num>
+  <Hit_id>Subject_1</Hit_id>
+  <Hit_def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</Hit_def>
+  <Hit_accession>Subject_1</Hit_accession>
+  <Hit_len>1047</Hit_len>
+  <Hit_hsps>
+    <Hsp>
+      <Hsp_num>1</Hsp_num>
+      <Hsp_bit-score>732.393</Hsp_bit-score>
+      <Hsp_score>1689</Hsp_score>
+      <Hsp_evalue>0</Hsp_evalue>
+      <Hsp_query-from>1</Hsp_query-from>
+      <Hsp_query-to>348</Hsp_query-to>
+      <Hsp_hit-from>1</Hsp_hit-from>
+      <Hsp_hit-to>1044</Hsp_hit-to>
+      <Hsp_query-frame>0</Hsp_query-frame>
+      <Hsp_hit-frame>1</Hsp_hit-frame>
+      <Hsp_identity>336</Hsp_identity>
+      <Hsp_positive>343</Hsp_positive>
+      <Hsp_gaps>0</Hsp_gaps>
+      <Hsp_align-len>348</Hsp_align-len>
+      <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_qseq>
+      <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_hseq>
+      <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA</Hsp_midline>
+    </Hsp>
+  </Hit_hsps>
+</Hit>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>18</Statistics_hsp-len>
+      <Statistics_eff-space>109230</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>20</Iteration_iter-num>
+  <Iteration_query-ID>Query_4</Iteration_query-ID>
+  <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
+  <Iteration_query-len>348</Iteration_query-len>
+<Iteration_hits>
+<Hit>
+  <Hit_num>1</Hit_num>
+  <Hit_id>Subject_2</Hit_id>
+  <Hit_def>gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds</Hit_def>
+  <Hit_accession>Subject_2</Hit_accession>
+  <Hit_len>1574</Hit_len>
+  <Hit_hsps>
+    <Hsp>
+      <Hsp_num>1</Hsp_num>
+      <Hsp_bit-score>646.12</Hsp_bit-score>
+      <Hsp_score>1489</Hsp_score>
+      <Hsp_evalue>0</Hsp_evalue>
+      <Hsp_query-from>1</Hsp_query-from>
+      <Hsp_query-to>341</Hsp_query-to>
+      <Hsp_hit-from>42</Hsp_hit-from>
+      <Hsp_hit-to>1067</Hsp_hit-to>
+      <Hsp_query-frame>0</Hsp_query-frame>
+      <Hsp_hit-frame>3</Hsp_hit-frame>
+      <Hsp_identity>290</Hsp_identity>
+      <Hsp_positive>320</Hsp_positive>
+      <Hsp_gaps>1</Hsp_gaps>
+      <Hsp_align-len>342</Hsp_align-len>
+      <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEA-SATVSKTE</Hsp_qseq>
+      <Hsp_hseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTE</Hsp_hseq>
+      <Hsp_midline>MNGTEGPNFY+P SN TGVVRSPFEYPQYYLAEPWQ+S+L AYMFLLI+LGFPINF+TLYVT+QHKKLRTPLNYILLNLA A+ FMVL GFT T+Y+S+ GYF+ G TGC +EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF ENHA+MGVAFTW+MAL+CA PPL GWSRYIPEG+QCSCG+DYYTLKPEVNNESFVIYMFVVHFTIP+IIIFFCYG+LV TVKEAAAQQQESATTQKAEKEVTRMVIIMV+ FLICWVPYASVAF+IF+ QGS FGPIFMT+PAFFAKS++IYNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+A SA  SKTE</Hsp_midline>
+    </Hsp>
+  </Hit_hsps>
+</Hit>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>18</Statistics_hsp-len>
+      <Statistics_eff-space>109230</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>21</Iteration_iter-num>
+  <Iteration_query-ID>Query_4</Iteration_query-ID>
+  <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
+  <Iteration_query-len>348</Iteration_query-len>
+<Iteration_hits>
+<Hit>
+  <Hit_num>1</Hit_num>
+  <Hit_id>Subject_3</Hit_id>
+  <Hit_def>gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds</Hit_def>
+  <Hit_accession>Subject_3</Hit_accession>
+  <Hit_len>4301</Hit_len>
+  <Hit_hsps>
+    <Hsp>
+      <Hsp_num>1</Hsp_num>
+      <Hsp_bit-score>151.343</Hsp_bit-score>
+      <Hsp_score>342</Hsp_score>
+      <Hsp_evalue>1.39567e-72</Hsp_evalue>
+      <Hsp_query-from>239</Hsp_query-from>
+      <Hsp_query-to>312</Hsp_query-to>
+      <Hsp_hit-from>3147</Hsp_hit-from>
+      <Hsp_hit-to>3368</Hsp_hit-to>
+      <Hsp_query-frame>0</Hsp_query-frame>
+      <Hsp_hit-frame>3</Hsp_hit-frame>
+      <Hsp_identity>69</Hsp_identity>
+      <Hsp_positive>73</Hsp_positive>
+      <Hsp_gaps>0</Hsp_gaps>
+      <Hsp_align-len>74</Hsp_align-len>
+      <Hsp_qseq>ESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQ</Hsp_qseq>
+      <Hsp_hseq>ESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQ</Hsp_hseq>
+      <Hsp_midline>ESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQ</Hsp_midline>
+    </Hsp>
+    <Hsp>
+      <Hsp_num>2</Hsp_num>
+      <Hsp_bit-score>126.324</Hsp_bit-score>
+      <Hsp_score>284</Hsp_score>
+      <Hsp_evalue>1.39567e-72</Hsp_evalue>
+      <Hsp_query-from>177</Hsp_query-from>
+      <Hsp_query-to>235</Hsp_query-to>
+      <Hsp_hit-from>2855</Hsp_hit-from>
+      <Hsp_hit-to>3031</Hsp_hit-to>
+      <Hsp_query-frame>0</Hsp_query-frame>
+      <Hsp_hit-frame>2</Hsp_hit-frame>
+      <Hsp_identity>54</Hsp_identity>
+      <Hsp_positive>57</Hsp_positive>
+      <Hsp_gaps>0</Hsp_gaps>
+      <Hsp_align-len>59</Hsp_align-len>
+      <Hsp_qseq>RYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAA</Hsp_qseq>
+      <Hsp_hseq>RYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEVRS</Hsp_hseq>
+      <Hsp_midline>RYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKE  +</Hsp_midline>
+    </Hsp>
+    <Hsp>
+      <Hsp_num>3</Hsp_num>
+      <Hsp_bit-score>229.42</Hsp_bit-score>
+      <Hsp_score>523</Hsp_score>
+      <Hsp_evalue>9.34154e-67</Hsp_evalue>
+      <Hsp_query-from>11</Hsp_query-from>
+      <Hsp_query-to>121</Hsp_query-to>
+      <Hsp_hit-from>1</Hsp_hit-from>
+      <Hsp_hit-to>333</Hsp_hit-to>
+      <Hsp_query-frame>0</Hsp_query-frame>
+      <Hsp_hit-frame>1</Hsp_hit-frame>
+      <Hsp_identity>107</Hsp_identity>
+      <Hsp_positive>109</Hsp_positive>
+      <Hsp_gaps>0</Hsp_gaps>
+      <Hsp_align-len>111</Hsp_align-len>
+      <Hsp_qseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_qseq>
+      <Hsp_hseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_hseq>
+      <Hsp_midline>VPFSN TGVVRSPFE+PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_midline>
+    </Hsp>
+    <Hsp>
+      <Hsp_num>4</Hsp_num>
+      <Hsp_bit-score>122.873</Hsp_bit-score>
+      <Hsp_score>276</Hsp_score>
+      <Hsp_evalue>1.03783e-32</Hsp_evalue>
+      <Hsp_query-from>119</Hsp_query-from>
+      <Hsp_query-to>177</Hsp_query-to>
+      <Hsp_hit-from>1404</Hsp_hit-from>
+      <Hsp_hit-to>1580</Hsp_hit-to>
+      <Hsp_query-frame>0</Hsp_query-frame>
+      <Hsp_hit-frame>3</Hsp_hit-frame>
+      <Hsp_identity>55</Hsp_identity>
+      <Hsp_positive>56</Hsp_positive>
+      <Hsp_gaps>0</Hsp_gaps>
+      <Hsp_align-len>59</Hsp_align-len>
+      <Hsp_qseq>LGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSR</Hsp_qseq>
+      <Hsp_hseq>LAGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSR</Hsp_hseq>
+      <Hsp_midline>L GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+A TWVMALACAAPPL GWSR</Hsp_midline>
+    </Hsp>
+    <Hsp>
+      <Hsp_num>5</Hsp_num>
+      <Hsp_bit-score>57.7368</Hsp_bit-score>
+      <Hsp_score>125</Hsp_score>
+      <Hsp_evalue>1.50808e-12</Hsp_evalue>
+      <Hsp_query-from>312</Hsp_query-from>
+      <Hsp_query-to>337</Hsp_query-to>
+      <Hsp_hit-from>4222</Hsp_hit-from>
+      <Hsp_hit-to>4299</Hsp_hit-to>
+      <Hsp_query-frame>0</Hsp_query-frame>
+      <Hsp_hit-frame>1</Hsp_hit-frame>
+      <Hsp_identity>23</Hsp_identity>
+      <Hsp_positive>24</Hsp_positive>
+      <Hsp_gaps>0</Hsp_gaps>
+      <Hsp_align-len>26</Hsp_align-len>
+      <Hsp_qseq>QFRNCMLTTICCGKNPLGDDEASATV</Hsp_qseq>
+      <Hsp_hseq>QFRNCMLTTLCCGKNPLGDDEASTTA</Hsp_hseq>
+      <Hsp_midline>QFRNCMLTT+CCGKNPLGDDEAS T </Hsp_midline>
+    </Hsp>
+  </Hit_hsps>
+</Hit>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>18</Statistics_hsp-len>
+      <Statistics_eff-space>109230</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>22</Iteration_iter-num>
+  <Iteration_query-ID>Query_4</Iteration_query-ID>
+  <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
+  <Iteration_query-len>348</Iteration_query-len>
+<Iteration_hits>
+<Hit>
+  <Hit_num>1</Hit_num>
+  <Hit_id>Subject_4</Hit_id>
+  <Hit_def>gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds</Hit_def>
+  <Hit_accession>Subject_4</Hit_accession>
+  <Hit_len>983</Hit_len>
+  <Hit_hsps>
+    <Hsp>
+      <Hsp_num>1</Hsp_num>
+      <Hsp_bit-score>658.198</Hsp_bit-score>
+      <Hsp_score>1517</Hsp_score>
+      <Hsp_evalue>0</Hsp_evalue>
+      <Hsp_query-from>11</Hsp_query-from>
+      <Hsp_query-to>336</Hsp_query-to>
+      <Hsp_hit-from>1</Hsp_hit-from>
+      <Hsp_hit-to>978</Hsp_hit-to>
+      <Hsp_query-frame>0</Hsp_query-frame>
+      <Hsp_hit-frame>1</Hsp_hit-frame>
+      <Hsp_identity>310</Hsp_identity>
+      <Hsp_positive>322</Hsp_positive>
+      <Hsp_gaps>0</Hsp_gaps>
+      <Hsp_align-len>326</Hsp_align-len>
+      <Hsp_qseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASAT</Hsp_qseq>
+      <Hsp_hseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTT</Hsp_hseq>
+      <Hsp_midline>VPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMV GGFT+TLYTS+HGYFVFG TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+AFTWVMALACAAPPLAGWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMV+AFLICW+PYASVAFYIFTHQGSNFGP+FMTIPAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T</Hsp_midline>
+    </Hsp>
+  </Hit_hsps>
+</Hit>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>18</Statistics_hsp-len>
+      <Statistics_eff-space>109230</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>23</Iteration_iter-num>
+  <Iteration_query-ID>Query_4</Iteration_query-ID>
+  <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
+  <Iteration_query-len>348</Iteration_query-len>
+<Iteration_hits>
+<Hit>
+  <Hit_num>1</Hit_num>
+  <Hit_id>Subject_5</Hit_id>
+  <Hit_def>gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds</Hit_def>
+  <Hit_accession>Subject_5</Hit_accession>
+  <Hit_len>1047</Hit_len>
+  <Hit_hsps>
+    <Hsp>
+      <Hsp_num>1</Hsp_num>
+      <Hsp_bit-score>711.256</Hsp_bit-score>
+      <Hsp_score>1640</Hsp_score>
+      <Hsp_evalue>0</Hsp_evalue>
+      <Hsp_query-from>1</Hsp_query-from>
+      <Hsp_query-to>348</Hsp_query-to>
+      <Hsp_hit-from>1</Hsp_hit-from>
+      <Hsp_hit-to>1044</Hsp_hit-to>
+      <Hsp_query-frame>0</Hsp_query-frame>
+      <Hsp_hit-frame>1</Hsp_hit-frame>
+      <Hsp_identity>325</Hsp_identity>
+      <Hsp_positive>337</Hsp_positive>
+      <Hsp_gaps>0</Hsp_gaps>
+      <Hsp_align-len>348</Hsp_align-len>
+      <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_qseq>
+      <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_hseq>
+      <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFE PQYYLAEPWQFSMLAAYMFLLI+LGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYT   E NNESFVIYMFVVHF IP+I+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGS+FGPIFMTIPAFFAK++A+YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA</Hsp_midline>
+    </Hsp>
+  </Hit_hsps>
+</Hit>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>18</Statistics_hsp-len>
+      <Statistics_eff-space>109230</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>24</Iteration_iter-num>
+  <Iteration_query-ID>Query_4</Iteration_query-ID>
+  <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
+  <Iteration_query-len>348</Iteration_query-len>
+<Iteration_hits>
+<Hit>
+  <Hit_num>1</Hit_num>
+  <Hit_id>Subject_6</Hit_id>
+  <Hit_def>gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds</Hit_def>
+  <Hit_accession>Subject_6</Hit_accession>
+  <Hit_len>1344</Hit_len>
+  <Hit_hsps>
+    <Hsp>
+      <Hsp_num>1</Hsp_num>
+      <Hsp_bit-score>626.708</Hsp_bit-score>
+      <Hsp_score>1444</Hsp_score>
+      <Hsp_evalue>0</Hsp_evalue>
+      <Hsp_query-from>1</Hsp_query-from>
+      <Hsp_query-to>341</Hsp_query-to>
+      <Hsp_hit-from>23</Hsp_hit-from>
+      <Hsp_hit-to>1048</Hsp_hit-to>
+      <Hsp_query-frame>0</Hsp_query-frame>
+      <Hsp_hit-frame>2</Hsp_hit-frame>
+      <Hsp_identity>281</Hsp_identity>
+      <Hsp_positive>311</Hsp_positive>
+      <Hsp_gaps>1</Hsp_gaps>
+      <Hsp_align-len>342</Hsp_align-len>
+      <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPL-GDDEASATVSKTE</Hsp_qseq>
+      <Hsp_hseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTE</Hsp_hseq>
+      <Hsp_midline>MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLYVT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLGGEIALW LVVLAIER++VVCKP++NFRFGE HAIMGV  TW MALACA PPL GWSRYIPEGLQCSCGIDYYT  P +NNESFVIYMF  HF+IP+ +I FCYG+LV TVKEAAAQQQES TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA YIFTHQGS FGPIFMTIP+FFAKS+A+YNP+IYI MNKQFR CM+TT+CCGKNP   +D ASAT SKTE</Hsp_midline>
+    </Hsp>
+  </Hit_hsps>
+</Hit>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>0</Statistics_db-num>
+      <Statistics_db-len>0</Statistics_db-len>
+      <Statistics_hsp-len>18</Statistics_hsp-len>
+      <Statistics_eff-space>109230</Statistics_eff-space>
+      <Statistics_kappa>0.071</Statistics_kappa>
+      <Statistics_lambda>0.299</Statistics_lambda>
+      <Statistics_entropy>0.27</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+</Iteration>
+</BlastOutput_iterations>
+</BlastOutput>
+