| Sun, 19 Nov 2023 22:57:39 +0000 |
peterjc |
Fix for get_species_taxids
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| Thu, 26 Oct 2023 12:25:07 +0000 |
peterjc |
Update for NCBI BLAST+ 2.14.1
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| Tue, 07 Jun 2022 12:15:44 +0000 |
peterjc |
Update with window size fix
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| Tue, 29 Mar 2022 14:54:02 +0000 |
peterjc |
"2.10.1+galaxy1 with taxid improvements"
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| Thu, 10 Sep 2020 13:23:34 +0000 |
peterjc |
"Updated to 2.10.1+galaxy0"
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| Thu, 10 Sep 2020 10:35:28 +0000 |
peterjc |
"Updated to 2.9.0+galaxy0"
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| Wed, 09 Sep 2020 15:32:17 +0000 |
peterjc |
"planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/ncbi_blast_plus commit 3f9f39ad808325a11d9967980d2cb82c96d69324"
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| Sat, 20 Jul 2019 18:36:36 -0400 |
peterjc |
v0.3.3 - fixed legacy dependecy definition
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| Tue, 23 Oct 2018 08:48:19 -0400 |
peterjc |
v0.3.1 completed gzip support
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| Mon, 09 Jul 2018 10:08:16 -0400 |
peterjc |
Fixed tool_dependencies.xml
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| Sat, 30 Jun 2018 17:22:46 -0400 |
peterjc |
v0.3.0 Updated for NCBI BLAST+ 2.7.1
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| Mon, 18 Sep 2017 06:21:27 -0400 |
peterjc |
v0.2.01 add -max_hsps, -use_sw_tback; lists args; internal updates
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| Wed, 19 Apr 2017 05:27:19 -0400 |
peterjc |
v0.2.00, for NCBI BLAST+ 2.5.0 via bioconda or tool_dependencies.xml
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| Mon, 07 Nov 2016 11:31:37 -0500 |
peterjc |
Uploaded v0.1.08, can search multiple local databases, fixes a pipe problem in blastdbcmd, and minor internal changes.
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| Thu, 19 Nov 2015 06:30:35 -0500 |
peterjc |
v0.1.07 - fix macro problem in blastxml_to_tabular.xml, reenable .loc tests
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| Mon, 07 Sep 2015 04:44:24 -0400 |
peterjc |
v0.1.06, now using BLAST+ 2.2.31
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| Fri, 04 Sep 2015 09:45:57 -0400 |
peterjc |
v0.1.05 - Update citation information now GigaScience paper is out
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| Wed, 22 Jul 2015 05:01:11 -0400 |
peterjc |
Uploaded v0.1.04, fix regression with BLAST database from history
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| Sun, 05 Jul 2015 10:37:27 -0400 |
peterjc |
Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc)
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| Mon, 01 Dec 2014 05:59:16 -0500 |
peterjc |
Uploaded v0.1.01 - Requires blastdbd datatype (blast_datatypes v0.0.19). Support for makeprofiledb to create protein domain databases and use them in RPS-BLAST and RPS-TBLASTN. Tools now support GI and SeqID filters, and embed the citations.
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| Fri, 14 Mar 2014 07:40:46 -0400 |
peterjc |
Uploaded v0.1.00, uses BLAST+ 2.2.29, allows custom column selection for tabular output - including taxonomy fields.
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| Tue, 21 Jan 2014 13:37:01 -0500 |
peterjc |
Re-uploaded v0.0.22, in order to update the blast_datatypes dependency
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| Thu, 05 Dec 2013 06:55:59 -0500 |
peterjc |
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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| Mon, 23 Sep 2013 06:14:13 -0400 |
peterjc |
Uploaded v0.0.20, handles dependencies via package_blast_plus_2_2_26, development moved to GitHub, RST README, MIT licence, citation information, more tests, percentage identity option to BLASTN, cElementTree to ElementTree fallback.
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| Thu, 25 Apr 2013 09:38:37 -0400 |
peterjc |
Uploaded v0.0.19, adds wrappers for rpsblast and rpstblastn with new blastdb_d.loc file for their protein domain database.
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| Tue, 19 Feb 2013 12:49:43 -0500 |
peterjc |
Uploaded v0.0.17, default to extended 24 column tabular output (rather than standard 12 column output). This should avoid many cases of repeated BLAST jobs being run due to later needing the extra columns.
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| Fri, 08 Feb 2013 05:51:26 -0500 |
peterjc |
Uploaded v0.0.16, declares explicit dependency on the 'blast_datatypes' repository.
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| Thu, 24 Jan 2013 12:40:41 -0500 |
peterjc |
Uploaded v0.0.15, clearer warning about searching against a FASTA file.
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| Fri, 09 Nov 2012 06:53:55 -0500 |
peterjc |
Uploaded v0.0.14 adding local BLAST database support.
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| Wed, 19 Sep 2012 13:08:31 -0400 |
peterjc |
Uploaded v0.0.13 which uses the recently added error handling. No longer bundles the hide_stderr.py script which is now redundant.
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| Thu, 23 Aug 2012 09:00:40 -0400 |
peterjc |
Uploaded v0.0.12b, same code but moving folders around to match all my other tools and make future development simpler.
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| Thu, 23 Aug 2012 07:32:06 -0400 |
peterjc |
Uploaded v0.0.12 again, without extra path
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