Mercurial > repos > devteam > package_freebayes_0_9_18_0059bdf

view tool_dependencies.xml @ 1:76afbeece45f draft

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author devteam
date Tue, 16 Dec 2014 16:21:52 -0500
parents 8f3ba7808a87
children c5fce4d80347
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<?xml version="1.0"?>
<tool_dependency>
    <package name="freebayes" version="0.9.18_0059bdf">
        <install version="1.0">
            <actions_group>
                <actions architecture="x86_64" os="linux">
                    <action type="download_by_url">http://depot.galaxyproject.org/package/linux/x86_64/freebayes/freebayes-0.9.18_0059bdf.tar.gz</action>
                    <action type="move_directory_files">
                        <source_directory>.</source_directory>
                        <destination_directory>$INSTALL_DIR</destination_directory>
                    </action>       
                </actions>                
                <action type="set_environment">
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                </action>
            </actions_group>
        </install>
        <readme>
	  Starting from version freebayes-0.9.14 freebayes is distributed through ToolShed only as pre-compiled x86_64 linux binaries.
	  This tarball contains two binaries:
	  
	  bamleftalign
	  freebayes
	  
	  Corresponding freebayes release 0.9.18 (0059bdf)
        </readme>
    </package>
</tool_dependency>