Mercurial > repos > devteam > package_samtools_0_1_19

comparison tool_dependencies.xml @ 1:95d2c4aefb5f draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Updated from GH
author devteam
date Wed, 03 Dec 2014 15:58:09 -0500
parents 1ef76f8d8e52
children
comparison
equal deleted inserted replaced
0:1ef76f8d8e52 1:95d2c4aefb5f
21 <action type="download_by_url">http://depot.galaxyproject.org/package/source/samtools/samtools-0.1.19.tar.bz2</action> 21 <action type="download_by_url">http://depot.galaxyproject.org/package/source/samtools/samtools-0.1.19.tar.bz2</action>
22 <action type="shell_command">sed -i.bak 's/-lcurses/-lncurses/' Makefile</action> 22 <action type="shell_command">sed -i.bak 's/-lcurses/-lncurses/' Makefile</action>
23 <action type="shell_command">make</action> 23 <action type="shell_command">make</action>
24 <action type="move_file"> 24 <action type="move_file">
25 <source>samtools</source> 25 <source>samtools</source>
26 <destination>$INSTALL_DIR/bin</destination>
27 </action>
28 <action type="move_file">
29 <source>bcftools/bcftools</source>
30 <destination>$INSTALL_DIR/bin</destination>
31 </action>
32 <action type="move_file">
33 <source>bcftools/vcfutils.pl</source>
26 <destination>$INSTALL_DIR/bin</destination> 34 <destination>$INSTALL_DIR/bin</destination>
27 </action> 35 </action>
28 <action type="move_file"> 36 <action type="move_file">
29 <source>libbam.a</source> 37 <source>libbam.a</source>
30 <destination>$INSTALL_DIR/lib</destination> 38 <destination>$INSTALL_DIR/lib</destination>