# HG changeset patch
# User devteam
# Date 1392407502 18000
# Node ID 60266bea92bb127f6187f1efb437d8626668f3fe
# Parent  7d66b50885d16b731a497b05fb5104b6f515e8c0
Uploaded

diff -r 7d66b50885d1 -r 60266bea92bb tool_dependencies.xml
--- a/tool_dependencies.xml	Fri Feb 14 12:45:06 2014 -0500
+++ b/tool_dependencies.xml	Fri Feb 14 14:51:42 2014 -0500
@@ -1,5 +1,8 @@
 <?xml version="1.0"?>
 <tool_dependency>
+    <set_environment version="1.0">
+        <environment_variable name="PERL5LIB" action="set_to">$REPOSITORY_INSTALL_DIR/perl</environment_variable>   
+    </set_environment>
     <package name="vcftools" version="0.1.11">
         <install version="1.0">
             <actions>
@@ -11,13 +14,13 @@
                 <action type="set_environment">
                     <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/vcftools/bin</environment_variable>
                 </action>
+                <action type="set_environment">
+                    <environment_variable name="PERL5LIB" action="prepend_to">$INSTALL_DIR/vcftools/lib/perl5/site_perl</environment_variable>
+                </action>
             </actions>
         </install>
         <readme>
             A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project
         </readme>
     </package>
-    <set_environment version="1.0">
-        <environment_variable name="PERL5LIB" action="set_to">$REPOSITORY_INSTALL_DIR/perl</environment_variable>   
-    </set_environment>
 </tool_dependency>
\ No newline at end of file