Mercurial > repos > devteam > pgsnp2gd_snp

comparison test-data/pgSnp2snp_output.txt @ 0:d281062566f9 draft

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author devteam
date Mon, 28 Jul 2014 11:55:36 -0400
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-1:000000000000 0:d281062566f9
1 #{"column_names":["chr","pos","A","B","Q","1A","1B","1G","1Q"],
2 #"individuals":[["na",6]],
3 #"dbkey":"hg19","pos":2,"rPos":2,"ref":1,"scaffold":1,"species":"hg19"}
4 chr1 1888681 T C -1 3 4 1 0.8893
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6 chr1 3211457 A C -1 17 10 1 0.8576
7 chr1 3222692 G A -1 10 14 1 0.8694
8 chr1 3281273 G A -1 5 4 1 0.8210
9 chr1 3630475 C T -1 12 12 1 0.8430
10 chr1 4599834 C T -1 0 18 0 0.8797
11 chr1 5287107 T G -1 0 6 0 0.8443
12 chr1 5307765 C T -1 22 12 1 0.8505
13 chr1 5341621 A C -1 5 3 1 0.9001
14 chr1 5478586 A G -1 0 11 0 0.8997
15 chr1 5680961 A C -1 16 10 1 0.8135
16 chr1 5736051 G A -1 34 57 1 0.8655
17 chr1 5831207 C T -1 5 10 1 0.8575
18 chr1 6200884 A C -1 0 13 0 0.8346
19 chr1 6307254 T C -1 0 11 0 0.8723
20 chr1 6621228 G T -1 10 11 1 0.8336
21 chr1 7094424 G A -1 0 4 0 0.8578
22 chr1 7392593 C T -1 15 25 1 0.8644
23 chr1 7500089 C G -1 0 13 0 0.8508
24 chr1 7911301 C T -1 8 9 1 0.8736
25 chr1 7954646 C T -1 12 8 1 0.8490
26 chr1 8027386 C T -1 15 21 1 0.8528
27 chr1 8549302 C T -1 8 7 1 0.8633
28 chr1 8932179 G T -1 13 12 1 0.8594
29 chr1 9016389 C T -1 0 14 0 0.8590
30 chr1 9494443 C T -1 0 6 0 0.8567
31 chr1 10615774 T C -1 0 15 0 0.8684
32 chr1 10622975 C T -1 0 4 0 0.8001
33 chr1 10782207 C T -1 0 3 0 0.8402
34 chr1 12238146 G A -1 9 4 1 0.8560
35 chr1 12429037 A G -1 8 6 1 0.8863
36 chr1 12669902 T C -1 24 10 1 0.8495
37 chr1 13189040 A T -1 8 4 1 0.8868
38 chr1 14208570 G A -1 8 10 1 0.8646
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41 chr1 15286095 A G -1 0 21 0 0.8600
42 chr1 15441925 C T -1 0 17 0 0.8402
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48 chr1 17053721 G T -1 0 66 0 0.8916
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53 chr1 18857430 C T -1 17 14 1 0.8586
54 chr1 19092742 G T -1 16 10 1 0.8678
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57 chr1 20044146 C T -1 5 6 1 0.8847
58 chr1 20269168 T C -1 10 5 1 0.8936
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61 chr1 21941643 G T -1 0 12 0 0.8389
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64 chr1 22904350 A G -1 10 4 1 0.8523
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162 chr1 57865802 G A -1 15 23 1 0.8628
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1619 chr3 15509326 C G -1 8 11 1 0.8599
1620 chr3 15572071 T C -1 15 8 1 0.8860
1621 chr3 15742821 T C -1 0 8 0 0.7984
1622 chr3 15928309 G C -1 0 11 0 0.8483
1623 chr3 16062814 G T -1 10 16 1 0.8467
1624 chr3 16112492 G A -1 19 15 1 0.8382
1625 chr3 16178870 C T -1 0 14 0 0.8503
1626 chr3 16366219 T C -1 0 6 0 0.8714
1627 chr3 16799932 T A -1 0 20 0 0.8772
1628 chr3 17137367 T C -1 24 12 1 0.8677
1629 chr3 18425380 C T -1 0 8 0 0.8688
1630 chr3 19136802 G T -1 21 19 1 0.8302
1631 chr3 19151226 G C -1 7 4 1 0.8568
1632 chr3 19962997 G T -1 0 28 0 0.8514
1633 chr3 20607112 C G -1 8 6 1 0.8741
1634 chr3 20648996 C T -1 14 10 1 0.8212
1635 chr3 21072048 A G -1 17 10 1 0.8512
1636 chr3 21235639 T G -1 0 4 0 0.9064
1637 chr3 21297909 C T -1 0 5 0 0.8095
1638 chr3 21357863 C A -1 14 8 1 0.8299
1639 chr3 21974922 T C -1 14 10 1 0.8590
1640 chr3 22022815 T C -1 7 6 1 0.9019
1641 chr3 22042307 A G -1 14 16 1 0.7899
1642 chr3 22049719 C T -1 0 12 0 0.8678
1643 chr3 22164859 C T -1 0 12 0 0.8434
1644 chr3 22164906 A G -1 0 6 0 0.8042
1645 chr3 22223597 C T -1 21 17 1 0.8595
1646 chr3 22240683 A T -1 24 8 1 0.8706
1647 chr3 22461099 C T -1 18 8 1 0.8527
1648 chr3 22563443 G T -1 0 32 0 0.8321
1649 chr3 23129657 G T -1 0 4 0 0.8685
1650 chr3 23159552 A T -1 15 13 1 0.8685
1651 chr3 23481112 G A -1 15 15 1 0.8447
1652 chr3 24191198 T A -1 0 4 0 0.8580
1653 chr3 24364672 C G -1 10 23 1 0.8526
1654 chr3 24723985 G A -1 7 7 1 0.8431
1655 chr3 24973846 A G -1 26 15 1 0.8726
1656 chr3 25461744 A G -1 0 3 0 0.8731
1657 chr3 25548204 A G -1 0 19 0 0.8802
1658 chr3 25785332 C T -1 13 6 1 0.8326
1659 chr3 26241695 T C -1 4 11 1 0.8669
1660 chr3 27050780 G A -1 18 9 1 0.8364
1661 chr3 27079101 C A -1 0 21 0 0.8463
1662 chr3 27371842 T C -1 18 15 1 0.8678
1663 chr3 27486374 G C -1 8 5 1 0.8077
1664 chr3 27871375 C T -1 10 4 1 0.8208
1665 chr3 28479716 T C -1 10 5 1 0.8460
1666 chr3 29246180 A C -1 12 6 1 0.8708
1667 chr3 30367146 A G -1 14 7 1 0.8853
1668 chr3 30691472 G A -1 0 17 0 0.8833
1669 chr3 30923559 G A -1 16 11 1 0.8906
1670 chr3 30949052 A G -1 24 15 1 0.8594
1671 chr3 31299774 T G -1 0 29 0 0.8232
1672 chr3 31435576 G A -1 0 34 0 0.8536
1673 chr3 31783325 A G -1 10 11 1 0.8024
1674 chr3 32033747 C G -1 15 20 1 0.9017
1675 chr3 32234674 T C -1 0 7 0 0.8057
1676 chr3 32257820 T A -1 0 19 0 0.8551
1677 chr3 32445245 A G -1 3 3 1 0.8950
1678 chr3 32900865 C T -1 2 2 1 0.8586
1679 chr3 33078220 G C -1 0 3 0 0.8197
1680 chr3 33103427 T C -1 0 22 0 0.8686
1681 chr3 33242341 C T -1 0 26 0 0.8675
1682 chr3 33480586 A C -1 7 13 1 0.8512
1683 chr3 33531799 A G -1 8 4 1 0.8344
1684 chr3 33665651 T C -1 14 10 1 0.8567
1685 chr3 33791753 A C -1 0 6 0 0.8135
1686 chr3 33796931 G T -1 10 10 1 0.8577
1687 chr3 34054737 A G -1 12 9 1 0.8807
1688 chr3 34209327 C T -1 19 19 1 0.7817
1689 chr3 34238216 G A -1 5 8 1 0.8299
1690 chr3 34367510 C T -1 18 10 1 0.8633
1691 chr3 34720121 T C -1 0 13 0 0.8936
1692 chr3 34793711 T A -1 0 19 0 0.8308
1693 chr3 35229807 A G -1 0 4 0 0.8712
1694 chr3 35427134 T C -1 17 13 1 0.8811
1695 chr3 35450285 C A -1 0 12 0 0.7948
1696 chr3 35460957 C T -1 0 11 0 0.8742
1697 chr3 35961895 T C -1 12 12 1 0.8670
1698 chr3 36487695 C T -1 0 27 0 0.8583
1699 chr3 36687851 A G -1 7 7 1 0.8200
1700 chr3 37199349 A T -1 6 7 1 0.8921
1701 chr3 37507448 G A -1 20 19 1 0.8664
1702 chr3 38406792 T G -1 0 25 0 0.8695
1703 chr3 38565937 T A -1 0 4 0 0.7900
1704 chr3 38804667 A C -1 12 10 1 0.7817
1705 chr3 39011225 A G -1 19 19 1 0.8503
1706 chr3 39054634 T C -1 5 4 1 0.7974
1707 chr3 39331971 A C -1 15 11 1 0.8309
1708 chr3 39578257 T C -1 0 21 0 0.8444
1709 chr3 39639753 T C -1 31 29 1 0.8506
1710 chr3 39640994 C T -1 17 14 1 0.8592
1711 chr3 39850445 G T -1 16 9 1 0.8393
1712 chr3 40012717 C T -1 14 17 1 0.8480
1713 chr3 40458040 T C -1 0 24 0 0.8698
1714 chr3 41010581 C G -1 10 16 1 0.8533
1715 chr3 41583038 G T -1 0 3 0 0.7862
1716 chr3 41632668 A C -1 0 38 0 0.8605
1717 chr3 41636663 C G -1 9 7 1 0.8456
1718 chr3 41794936 T G -1 20 17 1 0.8523
1719 chr3 41859851 T G -1 6 4 1 0.8840
1720 chr3 41946902 G A -1 14 14 1 0.8826
1721 chr3 42203992 A G -1 0 7 0 0.8771
1722 chr3 42270680 C T -1 0 11 0 0.8511
1723 chr3 42374628 T C -1 8 6 1 0.8660
1724 chr3 42409827 C T -1 7 4 1 0.8682
1725 chr3 42503533 G A -1 19 17 1 0.8686
1726 chr3 42784629 A G -1 24 14 1 0.8521
1727 chr3 43140032 T A -1 20 11 1 0.8564
1728 chr3 43256120 T A -1 19 28 1 0.8752
1729 chr3 45124876 G T -1 20 17 1 0.8718
1730 chr3 45202837 T C -1 0 22 0 0.8669
1731 chr3 45434708 C T -1 16 11 1 0.8497
1732 chr3 45648152 C T -1 19 13 1 0.8802
1733 chr3 45996760 G A -1 0 31 0 0.8392
1734 chr3 46589167 A T -1 0 4 0 0.8838
1735 chr3 46625654 C T -1 7 9 1 0.8462
1736 chr3 46743933 G T -1 3 6 1 0.8434
1737 chr3 46985862 A G -1 0 13 0 0.8791
1738 chr3 49936101 T C -1 11 7 1 0.8812
1739 chr3 50352199 A G -1 17 13 1 0.8580
1740 chr3 50837082 A C -1 0 28 0 0.8501
1741 chr3 50851987 G A -1 0 17 0 0.8225
1742 chr3 50900968 C N -1 24 0 2 0.8554
1743 chr3 50987193 G A -1 0 25 0 0.8454
1744 chr3 51006236 T C -1 0 11 0 0.9004
1745 chr3 51201411 T C -1 0 28 0 0.8655
1746 chr3 52720079 A C -1 0 15 0 0.8341
1747 chr3 52971578 G A -1 18 8 1 0.8434
1748 chr3 53084288 T G -1 0 9 0 0.8820
1749 chr3 54228290 A T -1 15 13 1 0.7837
1750 chr3 54267623 T C -1 22 14 1 0.8790
1751 chr3 54499049 C T -1 0 9 0 0.9304
1752 chr3 54926622 C A -1 0 10 0 0.8497
1753 chr3 54929650 C A -1 20 16 1 0.8356
1754 chr3 55119275 G A -1 14 21 1 0.8659
1755 chr3 55181875 T C -1 4 2 1 0.9610
1756 chr3 55492049 C T -1 0 26 0 0.8568
1757 chr3 55936700 A G -1 15 24 1 0.8462
1758 chr3 56135450 A G -1 9 18 1 0.8599
1759 chr3 56161289 T A -1 0 30 0 0.8452
1760 chr3 56228601 G A -1 6 8 1 0.7838
1761 chr3 56263255 T C -1 0 22 0 0.8632
1762 chr3 56502077 G T -1 0 12 0 0.8276
1763 chr3 56650707 G A -1 0 16 0 0.9014
1764 chr3 57278672 A G -1 0 26 0 0.8841
1765 chr3 57394484 T C -1 0 4 0 0.8452
1766 chr3 57455696 C T -1 10 6 1 0.7793
1767 chr3 57701936 C T -1 10 3 1 0.9208
1768 chr3 57834310 C T -1 6 3 1 0.8655
1769 chr3 57846576 C A -1 9 5 1 0.8268
1770 chr3 59415537 T C -1 4 3 1 0.8835
1771 chr3 59446925 T C -1 0 2 0 0.8953
1772 chr3 59576384 A G -1 0 15 0 0.8759
1773 chr3 59711016 C T -1 16 18 1 0.8571
1774 chr3 59733522 G A -1 5 13 1 0.8759
1775 chr3 59935242 G A -1 0 24 0 0.8670
1776 chr3 60190058 G A -1 0 3 0 0.8704
1777 chr3 60696312 T G -1 4 10 1 0.8906
1778 chr3 61170596 C T -1 18 12 1 0.8354
1779 chr3 61402546 G A -1 12 7 1 0.8093
1780 chr3 61503137 G C -1 11 6 1 0.8179
1781 chr3 61612839 C T -1 13 12 1 0.8470
1782 chr3 61669671 G A -1 21 11 1 0.8558
1783 chr3 62103206 T C -1 7 5 1 0.7560
1784 chr3 62542636 C T -1 7 19 1 0.8422
1785 chr3 62710807 C G -1 18 12 1 0.8712
1786 chr3 63010708 C T -1 7 11 1 0.8823
1787 chr3 63049584 A G -1 15 9 1 0.8692
1788 chr3 63166595 A G -1 0 34 0 0.7937
1789 chr3 63376646 A C -1 0 8 0 0.8426
1790 chr3 63588758 A G -1 0 17 0 0.8766
1791 chr3 63617362 T C -1 0 25 0 0.8485
1792 chr3 64653895 T A -1 22 8 1 0.8559
1793 chr3 64655814 A T -1 24 11 1 0.8609
1794 chr3 64902863 A T -1 10 14 1 0.8716
1795 chr3 65186244 A G -1 0 19 0 0.8735
1796 chr3 65802554 C T -1 11 6 1 0.8995
1797 chr3 65886518 A G -1 13 17 1 0.8198
1798 chr3 66057490 A G -1 11 10 1 0.8626
1799 chr3 67305724 T G -1 0 15 0 0.8558
1800 chr3 67338407 C T -1 11 13 1 0.8271
1801 chr3 67430279 C A -1 18 18 1 0.8792
1802 chr3 67456178 G C -1 0 16 0 0.8502
1803 chr3 67519386 G A -1 0 41 0 0.8677
1804 chr3 68106466 G A -1 19 22 1 0.8068
1805 chr3 68328673 T C -1 25 16 1 0.8532
1806 chr3 68561318 A G -1 5 8 1 0.8715
1807 chr3 68594318 G A -1 6 4 1 0.8575
1808 chr3 68628730 G A -1 11 18 1 0.8271
1809 chr3 69209055 C T -1 4 6 1 0.8473
1810 chr3 69282460 T C -1 0 17 0 0.8409
1811 chr3 69440853 C T -1 23 14 1 0.8720
1812 chr3 69686550 T A -1 5 3 1 0.8799
1813 chr3 69728894 A C -1 0 21 0 0.9032
1814 chr3 70260205 T C -1 10 13 1 0.8594
1815 chr3 71174438 G A -1 0 29 0 0.8794
1816 chr3 71744800 G A -1 0 37 0 0.8731
1817 chr3 72049287 T G -1 4 4 1 0.8546
1818 chr3 72158909 A G -1 0 26 0 0.8587
1819 chr3 72199038 A C -1 0 16 0 0.8925
1820 chr3 72366388 C T -1 10 7 1 0.9121
1821 chr3 72596704 G A -1 16 13 1 0.8740
1822 chr3 73340113 G A -1 10 8 1 0.8804
1823 chr3 73371681 A T -1 11 11 1 0.8190
1824 chr3 73771359 C T -1 0 20 0 0.8571
1825 chr3 73779273 G C -1 4 6 1 0.8793
1826 chr3 74589482 G A -1 17 17 1 0.8511
1827 chr3 74621971 A C -1 17 22 1 0.8512
1828 chr3 74815004 A C -1 6 3 1 0.8384
1829 chr3 74859099 G A -1 11 9 1 0.8585
1830 chr3 74985248 C T -1 0 5 0 0.9166
1831 chr3 75018428 G C -1 0 11 0 0.8850
1832 chr3 75219375 C G -1 13 5 1 0.8113
1833 chr3 75274309 A G -1 30 8 1 0.8790
1834 chr3 75714464 G T -1 4 8 1 0.8630
1835 chr3 75730599 C A -1 23 16 1 0.8402
1836 chr3 75753239 T C -1 16 24 1 0.8727
1837 chr3 75753269 A T -1 14 9 1 0.7236
1838 chr3 75755570 A T -1 27 25 1 0.8755
1839 chr3 75758389 T C -1 29 17 1 0.8619
1840 chr3 75798670 C A -1 30 13 1 0.8549
1841 chr3 75835681 G C -1 14 20 1 0.8290
1842 chr3 75836244 G A -1 0 6 0 0.8779
1843 chr3 75865062 T C -1 6 7 1 0.8151
1844 chr3 75994600 T C -1 6 4 1 0.8316
1845 chr3 76369350 G A -1 9 4 1 0.8694
1846 chr3 76796855 T G -1 14 5 1 0.8597
1847 chr3 76935672 A C -1 0 32 0 0.8679
1848 chr3 77476738 T C -1 5 4 1 0.8873
1849 chr3 77722694 C A -1 9 8 1 0.8390
1850 chr3 78359242 C G -1 9 6 1 0.8639
1851 chr3 78386665 T C -1 15 18 1 0.8572
1852 chr3 78404410 G A -1 6 4 1 0.8568
1853 chr3 78619514 A C -1 12 19 1 0.8600
1854 chr3 79000104 A T -1 3 4 1 0.7818
1855 chr3 79115080 T C -1 0 14 0 0.8753
1856 chr3 79257869 T C -1 4 4 1 0.9102
1857 chr3 79429810 G A -1 13 7 1 0.8814
1858 chr3 79693618 G A -1 0 5 0 0.8678
1859 chr3 79756483 A G -1 11 15 1 0.8698
1860 chr3 80052550 G A -1 15 8 1 0.8646
1861 chr3 80637237 T C -1 7 12 1 0.8816
1862 chr3 81840221 T C -1 11 9 1 0.8938
1863 chr3 82493906 G A -1 11 7 1 0.8381
1864 chr3 82512425 T C -1 11 10 1 0.8382
1865 chr3 82616036 G T -1 15 8 1 0.8699
1866 chr3 82804760 G A -1 9 12 1 0.8549
1867 chr3 83180679 T G -1 20 13 1 0.8877
1868 chr3 83522278 T A -1 0 22 0 0.8718
1869 chr3 83759824 G C -1 0 12 0 0.8688
1870 chr3 83949184 C T -1 15 14 1 0.8747
1871 chr3 84128384 C A -1 5 3 1 0.7550
1872 chr3 84299714 T A -1 0 13 0 0.8191
1873 chr3 84339957 C T -1 14 10 1 0.8421
1874 chr3 84720460 G T -1 0 26 0 0.8656
1875 chr3 84876249 C T -1 15 11 1 0.8552
1876 chr3 84936395 C T -1 9 6 1 0.8727
1877 chr3 85853952 G A -1 0 3 0 0.8768
1878 chr3 86106302 G A -1 12 22 1 0.8762
1879 chr3 86209359 C A -1 18 12 1 0.8841
1880 chr3 86278208 A G -1 21 12 1 0.8277
1881 chr3 86286880 C A -1 13 12 1 0.8754
1882 chr3 86794432 G A -1 18 17 1 0.8608
1883 chr3 86935861 A G -1 10 9 1 0.8448
1884 chr3 86952655 A T -1 6 3 1 0.7956
1885 chr3 87015149 T A -1 12 11 1 0.8532
1886 chr3 87194995 T C -1 0 9 0 0.8897
1887 chr3 88065830 T C -1 0 13 0 0.9039
1888 chr3 88492143 C T -1 10 4 1 0.8253
1889 chr3 88747634 A G -1 0 4 0 0.8805
1890 chr3 88917128 T A -1 20 14 1 0.7889
1891 chr3 89104979 A G -1 9 11 1 0.8893
1892 chr3 89316026 C T -1 18 18 1 0.8602
1893 chr3 89427194 A G -1 6 3 1 0.7876
1894 chr3 89980402 G T -1 5 6 1 0.8732
1895 chr3 90333848 T G -1 4 3 1 0.9041
1896 chr3 90379808 A C -1 5 4 1 0.8707
1897 chr3 90405601 G A -1 6 6 1 0.8672
1898 chr3 94021191 G T -1 0 8 0 0.8946
1899 chr3 94038828 T C -1 21 10 1 0.8875
1900 chr3 94106811 C T -1 12 12 1 0.8418
1901 chr3 94422946 A G -1 0 5 0 0.9074
1902 chr3 94964527 A G -1 18 9 1 0.8863
1903 chr3 95230267 C G -1 14 7 1 0.7979
1904 chr3 95712518 G T -1 0 4 0 0.8596
1905 chr3 96275861 T A -1 10 13 1 0.8993
1906 chr3 96484353 A G -1 6 12 1 0.8060
1907 chr3 96549128 T A -1 15 8 1 0.8666
1908 chr3 96900440 G A -1 8 4 1 0.8420
1909 chr3 96936264 G A -1 17 12 1 0.8577
1910 chr3 97228892 G A -1 0 3 0 0.9293
1911 chr3 97334173 C A -1 0 32 0 0.8470
1912 chr3 97909212 A G -1 0 5 0 0.9144
1913 chr3 98027887 C T -1 0 16 0 0.8589
1914 chr3 98740727 T C -1 0 23 0 0.8346
1915 chr3 98797804 G T -1 20 10 1 0.8330
1916 chr3 98964053 T C -1 0 5 0 0.8017
1917 chr3 99072829 C T -1 0 8 0 0.8331
1918 chr3 99521107 C T -1 0 13 0 0.8281
1919 chr3 99688975 C T -1 6 13 1 0.8443
1920 chr3 99941650 T G -1 0 10 0 0.8669
1921 chr3 100085555 C A -1 0 6 0 0.8588
1922 chr3 101262839 C A -1 0 22 0 0.8637
1923 chr3 101712039 C G -1 25 12 1 0.8405
1924 chr3 102001474 A G -1 3 3 1 0.7834
1925 chr3 102048254 C T -1 0 27 0 0.8461
1926 chr3 102779192 G A -1 12 10 1 0.8550
1927 chr3 102816613 T G -1 16 22 1 0.7270
1928 chr3 102939292 G A -1 0 3 0 0.8757
1929 chr3 103101750 T C -1 12 9 1 0.8599
1930 chr3 103122584 C T -1 7 3 1 0.8690
1931 chr3 104034940 C A -1 0 3 0 0.8049
1932 chr3 106015451 C A -1 8 9 1 0.8566
1933 chr3 106351891 C T -1 9 7 1 0.9049
1934 chr3 106617797 T A -1 0 29 0 0.8536
1935 chr3 107034969 T C -1 13 4 1 0.8756
1936 chr3 107066873 G A -1 16 10 1 0.7990
1937 chr3 107196595 G A -1 19 13 1 0.8577
1938 chr3 107329176 G T -1 5 12 1 0.8173
1939 chr3 107399161 G A -1 18 12 1 0.8404
1940 chr3 107609989 C T -1 0 32 0 0.8647
1941 chr3 107902492 A C -1 12 10 1 0.8797
1942 chr3 108342565 A G -1 0 6 0 0.8491
1943 chr3 108912208 G T -1 11 15 1 0.8371
1944 chr3 109505764 T C -1 0 28 0 0.8769
1945 chr3 109606770 G A -1 12 14 1 0.8367
1946 chr3 110050978 T C -1 9 8 1 0.8241
1947 chr3 110116543 T C -1 18 11 1 0.8405
1948 chr3 110996785 C A -1 14 14 1 0.8386
1949 chr3 111153710 G A -1 0 27 0 0.8575
1950 chr3 111486927 G C -1 11 8 1 0.9152
1951 chr3 111498341 T C -1 0 39 0 0.8563
1952 chr3 111518037 T C -1 3 6 1 0.8626
1953 chr3 111610854 A G -1 13 12 1 0.8472
1954 chr3 111647455 A G -1 16 17 1 0.8721
1955 chr3 111694437 T C -1 0 9 0 0.8804
1956 chr3 111875921 T C -1 0 10 0 0.8038
1957 chr3 111884172 C G -1 4 7 1 0.8664
1958 chr3 111971879 T A -1 17 16 1 0.8450
1959 chr3 112536239 T A -1 14 12 1 0.8940
1960 chr3 112973063 T G -1 9 16 1 0.8720
1961 chr3 113017486 G T -1 5 8 1 0.8943
1962 chr3 113239021 A G -1 6 4 1 0.8849
1963 chr3 115175457 G T -1 14 9 1 0.8665
1964 chr3 115818342 A G -1 20 15 1 0.8616
1965 chr3 115844505 C T -1 0 25 0 0.8601
1966 chr3 116028663 C T -1 10 15 1 0.8406
1967 chr3 116114622 T C -1 11 9 1 0.8732
1968 chr3 116289944 C T -1 0 44 0 0.8356
1969 chr3 116419418 C G -1 0 24 0 0.8418
1970 chr3 116867346 C T -1 0 40 0 0.8778
1971 chr3 117318038 C A -1 0 35 0 0.8349
1972 chr3 117495688 A G -1 17 13 1 0.8778
1973 chr3 118184024 G A -1 0 7 0 0.8606
1974 chr3 118348699 T G -1 17 13 1 0.8742
1975 chr3 118430448 T G -1 0 29 0 0.8725
1976 chr3 120551700 T C -1 0 3 0 0.7684
1977 chr3 121184375 C T -1 0 6 0 0.8303
1978 chr3 121611167 T C -1 0 27 0 0.8637
1979 chr3 122032833 G A -1 10 8 1 0.8865
1980 chr3 122701434 T C -1 4 10 1 0.8240
1981 chr3 123401554 G A -1 0 24 0 0.8324
1982 chr3 123513477 G A -1 9 12 1 0.8020
1983 chr3 123623576 T C -1 0 21 0 0.9124
1984 chr3 123897305 C T -1 3 7 1 0.8552
1985 chr3 123961057 C G -1 20 13 1 0.8715
1986 chr3 124195603 C T -1 10 10 1 0.8263
1987 chr3 124348661 T A -1 14 14 1 0.8661
1988 chr3 124364509 C T -1 9 6 1 0.8070
1989 chr3 124729096 G T -1 0 4 0 0.7988
1990 chr3 124926345 A C -1 13 20 1 0.8813
1991 chr3 125188969 T C -1 0 23 0 0.8644
1992 chr3 125439051 G T -1 0 3 0 0.9056
1993 chr3 125511506 C A -1 7 3 1 0.8271
1994 chr3 125836156 C G -1 4 5 1 0.9162
1995 chr3 126178389 A C -1 11 7 1 0.8827
1996 chr3 126356546 C T -1 9 6 1 0.8688
1997 chr3 127020360 C G -1 0 19 0 0.8970
1998 chr3 127748733 T G -1 26 22 1 0.8788
1999 chr3 127913262 A G -1 12 13 1 0.8509
2000 chr3 128129039 T C -1 4 4 1 0.8389
2001 chr3 128159585 A C -1 8 10 1 0.8704
2002 chr3 128704289 A T -1 7 5 1 0.8901
2003 chr3 128887526 A G -1 0 9 0 0.8940
2004 chr3 129084989 G A -1 11 10 1 0.8607
2005 chr3 129136059 C A -1 4 5 1 0.8817
2006 chr3 129276112 C G -1 6 8 1 0.8759
2007 chr3 129698702 T C -1 0 25 0 0.8172
2008 chr3 130133619 T C -1 12 8 1 0.8375
2009 chr3 130135574 A T -1 6 7 1 0.8183
2010 chr3 130304773 T C -1 8 6 1 0.8546
2011 chr3 130511024 T C -1 0 20 0 0.8958
2012 chr3 131066312 C A -1 15 11 1 0.8319
2013 chr3 131805810 C T -1 12 9 1 0.8438
2014 chr3 131843596 C G -1 30 17 1 0.8338
2015 chr3 132727356 G A -1 0 12 0 0.8482
2016 chr3 133375033 A G -1 0 24 0 0.8709
2017 chr3 133595332 T C -1 7 8 1 0.8296
2018 chr3 134007732 G T -1 0 10 0 0.8479
2019 chr3 134054044 A T -1 0 14 0 0.8819
2020 chr3 134219018 C T -1 7 7 1 0.8564
2021 chr3 134296512 G C -1 0 3 0 0.8369
2022 chr3 134530097 T G -1 0 4 0 0.8131
2023 chr3 134761039 T C -1 0 17 0 0.8895
2024 chr3 135110410 A C -1 13 5 1 0.8458
2025 chr3 135363557 C T -1 17 7 1 0.8796
2026 chr3 135771729 T C -1 0 35 0 0.8286
2027 chr3 136098558 C A -1 4 3 1 0.8333
2028 chr3 136413838 C T -1 0 31 0 0.8445
2029 chr3 136455955 C G -1 12 7 1 0.8785
2030 chr3 136498168 A C -1 17 13 1 0.8777
2031 chr3 137395602 C T -1 15 6 1 0.8943
2032 chr3 137795666 T G -1 7 5 1 0.9082
2033 chr3 138402353 A G -1 6 7 1 0.6744
2034 chr3 138872625 A T -1 7 3 1 0.8421
2035 chr3 140892820 T C -1 0 31 0 0.8849
2036 chr3 140951391 G T -1 0 4 0 0.8451
2037 chr3 141359254 T C -1 0 2 0 0.9450
2038 chr3 142395071 A G -1 16 10 1 0.8823
2039 chr3 142921927 A G -1 0 20 0 0.8438
2040 chr3 143360567 C A -1 15 10 1 0.8421
2041 chr3 143587925 A G -1 0 2 0 0.9188
2042 chr3 143595445 A G -1 0 24 0 0.8372
2043 chr3 143601887 A C -1 7 5 1 0.8474
2044 chr3 143605433 A G -1 9 4 1 0.8881
2045 chr3 143658933 C G -1 0 15 0 0.8591
2046 chr3 144090889 A T -1 7 6 1 0.9251
2047 chr3 144246106 A C -1 17 17 1 0.7681
2048 chr3 144271653 C T -1 14 9 1 0.7523
2049 chr3 144655655 T C -1 0 27 0 0.8502
2050 chr3 144681634 T C -1 0 15 0 0.8898
2051 chr3 144859261 A T -1 11 4 1 0.8450
2052 chr3 145131672 G A -1 9 4 1 0.8444
2053 chr3 145133375 G A -1 5 3 1 0.8470
2054 chr3 145245466 C T -1 13 10 1 0.8606
2055 chr3 145564367 G C -1 0 18 0 0.8544
2056 chr3 145758563 A C -1 27 17 1 0.8537
2057 chr3 145775424 T C -1 0 20 0 0.8638
2058 chr3 145807639 G A -1 17 11 1 0.8571
2059 chr3 146045525 C T -1 12 5 1 0.8367
2060 chr3 146123635 C T -1 6 6 1 0.8638
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2062 chr3 147331126 C T -1 5 3 1 0.7820
2063 chr3 147334137 G T -1 0 13 0 0.8801
2064 chr3 147348030 T C -1 6 12 1 0.8704
2065 chr3 147920677 G C -1 13 7 1 0.8796
2066 chr3 148263686 C T -1 9 6 1 0.8722
2067 chr3 148344396 G A -1 12 9 1 0.8554
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2075 chr3 150091656 G A -1 18 5 1 0.8186
2076 chr3 150125238 G C -1 5 10 1 0.8407
2077 chr3 150181917 C T -1 12 6 1 0.8214
2078 chr3 150238548 T C -1 15 5 1 0.8698
2079 chr3 150423630 C T -1 11 12 1 0.8376
2080 chr3 150565052 G T -1 9 5 1 0.7952
2081 chr3 150727495 T C -1 20 23 1 0.8439
2082 chr3 150852991 C T -1 11 6 1 0.8800
2083 chr3 151057174 G A -1 0 8 0 0.8247
2084 chr3 151238772 A G -1 12 7 1 0.8938
2085 chr3 151759592 A C -1 5 6 1 0.8526
2086 chr3 152054221 A G -1 15 16 1 0.8508
2087 chr3 152213085 C T -1 0 35 0 0.8502
2088 chr3 153489810 G A -1 0 5 0 0.8479
2089 chr3 153733728 C T -1 0 34 0 0.8479
2090 chr3 153988465 T C -1 4 6 1 0.8907
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2100 chr3 157494083 T C -1 0 14 0 0.8220
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2103 chr3 158099781 T C -1 0 9 0 0.8384
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2105 chr3 158569224 A G -1 29 14 1 0.9029
2106 chr3 159100164 C T -1 4 2 1 0.8952
2107 chr3 159523087 C T -1 0 30 0 0.8770
2108 chr3 160034573 A G -1 13 12 1 0.8431
2109 chr3 160165607 G T -1 7 4 1 0.8048
2110 chr3 160340208 A C -1 22 8 1 0.8199
2111 chr3 161914911 T C -1 16 19 1 0.8703
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2113 chr3 162412771 T C -1 0 16 0 0.8976
2114 chr3 162426027 T C -1 0 9 0 0.8443
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2116 chr3 162497012 T C -1 9 15 1 0.8364
2117 chr3 162730802 A G -1 4 3 1 0.8161
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2120 chr3 164127325 G A -1 12 9 1 0.8498
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2122 chr3 165393628 T A -1 22 10 1 0.8617
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2124 chr3 165788381 A C -1 0 20 0 0.8712
2125 chr3 165842802 T C -1 10 11 1 0.8809
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2132 chr3 168226051 C T -1 0 4 0 0.8751
2133 chr3 168610223 T C -1 7 12 1 0.8802
2134 chr3 168852681 T C -1 17 12 1 0.8711
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2138 chr3 170575551 C T -1 14 15 1 0.8276
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2141 chr3 170970129 T G -1 5 6 1 0.8799
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2147 chr3 173023607 A G -1 7 5 1 0.8176
2148 chr3 173028174 A C -1 5 12 1 0.8712
2149 chr3 173308201 C T -1 8 8 1 0.8736
2150 chr3 173310567 G C -1 0 32 0 0.8722
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2156 chr3 174065179 A G -1 17 13 1 0.8778
2157 chr3 174227188 T C -1 0 3 0 0.8732
2158 chr3 174565240 A T -1 0 19 0 0.8395
2159 chr3 174736918 A G -1 3 4 1 0.9232
2160 chr3 175063542 G A -1 0 25 0 0.8642
2161 chr3 175360566 T C -1 0 4 0 0.9282
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2163 chr3 175946325 T C -1 15 8 1 0.8594
2164 chr3 175955646 A G -1 20 13 1 0.8760
2165 chr3 176055596 T G -1 4 3 1 0.8949
2166 chr3 176174839 G A -1 0 33 0 0.8497
2167 chr3 176533082 A T -1 19 8 1 0.8351
2168 chr3 176599355 T C -1 0 31 0 0.8744
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2207 chr3 187219487 C T -1 18 10 1 0.8702
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2209 chr3 187695753 A G -1 15 11 1 0.8999
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2220 chr3 190363593 G A -1 12 16 1 0.8257
2221 chr3 190433647 T C -1 20 17 1 0.8854
2222 chr3 190520661 A C -1 13 8 1 0.8750
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2228 chr3 191015892 T C -1 4 5 1 0.8610
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2240 chr3 194078986 T N -1 27 0 2 0.8552
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2273 chr4 6697765 T G -1 17 18 1 0.8351
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9945 chrX 133907790 C A -1 0 12 0 0.8533
9946 chrX 134518384 A C -1 0 9 0 0.8196
9947 chrX 134766489 A G -1 15 9 1 0.8127
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9949 chrX 135190793 A G -1 0 17 0 0.8961
9950 chrX 136655716 T G -1 0 6 0 0.8716
9951 chrX 136733809 T C -1 0 15 0 0.8669
9952 chrX 137469231 T C -1 0 18 0 0.8722
9953 chrX 137852981 G T -1 0 11 0 0.8276
9954 chrX 139003000 G A -1 0 13 0 0.8526
9955 chrX 139110302 G A -1 0 9 0 0.8564
9956 chrX 139529487 T C -1 0 18 0 0.8521
9957 chrX 139531472 C T -1 0 11 0 0.8682
9958 chrX 139615864 A G -1 0 9 0 0.8202
9959 chrX 139702889 T C -1 0 3 0 0.8590
9960 chrX 140485622 C G -1 0 3 0 0.8489
9961 chrX 140511684 A G -1 0 13 0 0.8238
9962 chrX 140743414 T C -1 0 4 0 0.8914
9963 chrX 141082368 T C -1 0 12 0 0.8648
9964 chrX 141153066 C G -1 0 7 0 0.8369
9965 chrX 141213396 C A -1 0 4 0 0.8604
9966 chrX 142194135 G A -1 0 10 0 0.8411
9967 chrX 142652846 C T -1 0 19 0 0.8740
9968 chrX 142688444 C A -1 0 6 0 0.8866
9969 chrX 142756403 T C -1 0 18 0 0.8646
9970 chrX 144873543 T C -1 0 12 0 0.8420
9971 chrX 145351956 C T -1 0 5 0 0.8467
9972 chrX 145881542 T G -1 0 3 0 0.8178
9973 chrX 145924332 A G -1 0 9 0 0.8605
9974 chrX 145935548 A C -1 0 14 0 0.7743
9975 chrX 146079383 A C -1 0 3 0 0.8542
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9977 chrX 146613499 A C -1 0 11 0 0.8771
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9980 chrX 149603761 C A -1 0 3 0 0.8279
9981 chrX 150053854 A C -1 0 11 0 0.8358
9982 chrX 150408360 C T -1 0 11 0 0.8165
9983 chrX 150451895 G A -1 0 23 0 0.8775
9984 chrX 150777182 C T -1 0 16 0 0.8623
9985 chrX 150808405 G T -1 0 15 0 0.8428
9986 chrX 150923430 T G -1 3 3 1 0.8295
9987 chrX 150989778 G C -1 0 8 0 0.8441
9988 chrX 152584270 A G -1 0 7 0 0.8157
9989 chrX 152845290 C T -1 0 12 0 0.8522
9990 chrX 153055432 G A -1 0 17 0 0.8461
9991 chrX 153090059 A G -1 0 3 0 0.8010
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9993 chrY 9939199 C T -1 20 13 1 0.8191
9994 chrY 9962146 T G -1 5 3 1 0.8341
9995 chrY 9991556 T G -1 22 31 1 0.8248
9996 chrY 10050627 T C -1 5 4 1 0.8047
9997 chrY 10068141 A T -1 15 20 1 0.8232
9998 chrY 13195465 G T -1 8 8 1 0.8215
9999 chrY 13295972 C T -1 16 10 1 0.8173
10000 chrY 13567253 A C -1 5 6 1 0.8351
10001 chrY 18619115 A C -1 0 4 0 0.8518
10002 chrY 59026174 A G -1 5 13 1 0.8404