annotate test-data/picard_CollectBaseDistributionByCycle_test1.tab @ 16:6741a8ace658 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
author iuc
date Wed, 08 Feb 2017 12:45:35 -0500
parents 3d4f1fa26f0e
children 5053a18d9bc8
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1 ## htsjdk.samtools.metrics.StringHeader
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2 # picard.analysis.CollectBaseDistributionByCycle CHART_OUTPUT=/Users/anton/galaxy-central/database/files/000/dataset_660.dat ALIGNED_READS_ONLY=true PF_READS_ONLY=true INPUT=/Users/anton/galaxy-central/database/files/000/dataset_616.dat OUTPUT=/Users/anton/galaxy-central/database/files/000/dataset_659.dat REFERENCE_SEQUENCE=/Users/anton/temp/mt.fa ASSUME_SORTED=true VERBOSITY=ERROR QUIET=true VALIDATION_STRINGENCY=LENIENT STOP_AFTER=0 COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
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3 ## htsjdk.samtools.metrics.StringHeader
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4 # Started on: Fri Oct 03 10:05:03 EDT 2014
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6 ## METRICS CLASS picard.analysis.BaseDistributionByCycleMetrics
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7 READ_END CYCLE PCT_A PCT_C PCT_G PCT_T PCT_N
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