annotate tool_dependencies.xml @ 3:bf1c3f9f8282

Fix for FastqToSam MAX_Q usage detection.
author Daniel Blankenberg <dan@bx.psu.edu>
date Fri, 03 May 2013 17:13:01 -0400
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children ab1f60c26526
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="picard" version="1.56.0">
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4 <install version="1.0">
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5 <actions>
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6 <action type="download_by_url">http://downloads.sourceforge.net/project/picard/picard-tools/1.56/picard-tools-1.56.zip</action>
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7 <action type="move_directory_files">
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8 <source_directory>picard-tools-1.56</source_directory>
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9 <destination_directory>$INSTALL_DIR/jars</destination_directory>
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10 </action>
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11 <action type="set_environment">
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12 <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR/jars</environment_variable>
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13 </action>
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14 </actions>
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15 </install>
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16 <readme>
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17 </readme>
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18 </package>
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19 </tool_dependency>