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comparison picard_BedToIntervalList.xml @ 8:3a3234d7a2e8 draft

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit 00a7926c285bc4a339bd7deebf40b28f39c7d947-dirty
author devteam
date Thu, 16 Jul 2015 15:53:10 -0400
parents 3d4f1fa26f0e
children 05087b27692a
comparison
equal deleted inserted replaced
7:379fdf4c41ac 8:3a3234d7a2e8
1 <tool name="BedToIntervalList" id="picard_BedToIntervalList" version="1.126.0"> 1 <tool name="BedToIntervalList" id="picard_BedToIntervalList" version="@TOOL_VERSION@.0">
2 <description>convert coordinate data into picard interval list format</description> 2 <description>convert coordinate data into picard interval list format</description>
3 <requirements><requirement type="package" version="1.126.0">picard</requirement></requirements>
4
5 <macros> 3 <macros>
6 <import>picard_macros.xml</import> 4 <import>picard_macros.xml</import>
7 </macros> 5 </macros>
8 6 <expand macro="requirements" />
9 <command> 7 <command>
10 @java_options@ 8 @java_options@
11 9
12 #set $picard_dict = "localref.dict" 10 #set $picard_dict = "localref.dict"
13 #set $ref_fasta = "localref.fa" ## This is done because picards "likes" .fa extension 11 #set $ref_fasta = "localref.fa" ## This is done because picards "likes" .fa extension