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comparison picard_CleanSam.xml @ 8:3a3234d7a2e8 draft

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit 00a7926c285bc4a339bd7deebf40b28f39c7d947-dirty
author devteam
date Thu, 16 Jul 2015 15:53:10 -0400
parents 3d4f1fa26f0e
children 05087b27692a
comparison
equal deleted inserted replaced
7:379fdf4c41ac 8:3a3234d7a2e8
1 <tool id="picard_CleanSam" name="CleanSam" version="1.126.0"> 1 <tool id="picard_CleanSam" name="CleanSam" version="@TOOL_VERSION@.0">
2
3 <description>perform SAM/BAM grooming</description> 2 <description>perform SAM/BAM grooming</description>
4
5 <requirements>
6 <requirement type="package" version="1.126.0">picard</requirement>
7 </requirements>
8
9 <macros> 3 <macros>
10 <import>picard_macros.xml</import> 4 <import>picard_macros.xml</import>
11 </macros> 5 </macros>
12 6 <expand macro="requirements" />
13 <command> 7 <command>
14 @java_options@ 8 @java_options@
15 java -jar \$JAVA_JAR_PATH/picard.jar 9 java -jar \$JAVA_JAR_PATH/picard.jar
16 CleanSam 10 CleanSam
17 INPUT="${inputFile}" 11 INPUT="${inputFile}"