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comparison test-data/picard_QualityScoreDistribution_test1.tab @ 5:3d4f1fa26f0e draft

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author devteam
date Tue, 16 Dec 2014 19:03:21 -0500
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4:ab1f60c26526 5:3d4f1fa26f0e
1 ## htsjdk.samtools.metrics.StringHeader
2 # picard.analysis.QualityScoreDistribution CHART_OUTPUT=/Users/anton/galaxy-central/database/files/000/dataset_968.dat ALIGNED_READS_ONLY=false PF_READS_ONLY=false INCLUDE_NO_CALLS=false INPUT=/Users/anton/galaxy-central/database/files/000/dataset_966.dat OUTPUT=/Users/anton/galaxy-central/database/files/000/dataset_967.dat REFERENCE_SEQUENCE=localref.fa ASSUME_SORTED=true VERBOSITY=ERROR QUIET=true VALIDATION_STRINGENCY=LENIENT STOP_AFTER=0 COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
3 ## htsjdk.samtools.metrics.StringHeader
4 # Started on: Wed Oct 15 14:31:45 EDT 2014
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7 ## HISTOGRAM java.lang.Byte
8 QUALITY COUNT_OF_Q
9 6 704
10 7 2044
11 8 745
12 9 2761
13 10 1193
14 11 723
15 12 1766
16 13 1467
17 14 1400
18 15 1463
19 16 478
20 17 831
21 18 330
22 19 904
23 20 1538
24 21 2953
25 22 565
26 23 4270
27 24 1496
28 25 5178
29 26 3992
30 27 3779
31 28 3074
32 29 2909
33 30 19446
34 31 3520
35 32 13368
36 33 9203
37 34 22271
38 35 24655
39 36 64306
40 37 38212
41 38 95777
42 39 67370
43 40 36926
44