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comparison picard_CollectInsertSizeMetrics.xml @ 14:465cbb0cf2eb draft

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit 74ee0f0b594075fab7f707aaffb4a7f9dac35f2f
author devteam
date Wed, 07 Dec 2016 14:56:30 -0500
parents 7e6fd3d0f16e
children 5053a18d9bc8
comparison
equal deleted inserted replaced
13:7e6fd3d0f16e 14:465cbb0cf2eb
19 #set $reference_fasta_filename = str( $reference_source.ref_file.fields.path ) 19 #set $reference_fasta_filename = str( $reference_source.ref_file.fields.path )
20 #end if 20 #end if
21 21
22 picard 22 picard
23 CollectInsertSizeMetrics 23 CollectInsertSizeMetrics
24 INPUT='$inputFile.element_identifier' 24 INPUT='$escaped_element_identifier'
25 OUTPUT="${outFile}" 25 OUTPUT="${outFile}"
26 HISTOGRAM_FILE="${histFile}" 26 HISTOGRAM_FILE="${histFile}"
27 DEVIATIONS="${deviations}" 27 DEVIATIONS="${deviations}"
28 28
29 #if str( $hist_width ): 29 #if str( $hist_width ):