Mercurial > repos > devteam > picard
comparison picard_MarkDuplicates.xml @ 14:465cbb0cf2eb draft
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit 74ee0f0b594075fab7f707aaffb4a7f9dac35f2f
author | devteam |
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date | Wed, 07 Dec 2016 14:56:30 -0500 |
parents | 7e6fd3d0f16e |
children | fc288950c3b7 |
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13:7e6fd3d0f16e | 14:465cbb0cf2eb |
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8 @java_options@ | 8 @java_options@ |
9 @symlink_element_identifier@ | 9 @symlink_element_identifier@ |
10 picard | 10 picard |
11 MarkDuplicates | 11 MarkDuplicates |
12 | 12 |
13 INPUT='$inputFile.element_identifier' | 13 INPUT='$escaped_element_identifier' |
14 OUTPUT="${outFile}" | 14 OUTPUT="${outFile}" |
15 | 15 |
16 METRICS_FILE="${metrics_file}" | 16 METRICS_FILE="${metrics_file}" |
17 #for $element in $comments: | 17 #for $element in $comments: |
18 COMMENT="${element.comment}" | 18 COMMENT="${element.comment}" |