Mercurial > repos > devteam > picard
comparison picard_ReplaceSamHeader.xml @ 14:465cbb0cf2eb draft
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit 74ee0f0b594075fab7f707aaffb4a7f9dac35f2f
author | devteam |
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date | Wed, 07 Dec 2016 14:56:30 -0500 |
parents | 7e6fd3d0f16e |
children | 5053a18d9bc8 |
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13:7e6fd3d0f16e | 14:465cbb0cf2eb |
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13 ln -s "${inputFile}" "${fasta_file}" && | 13 ln -s "${inputFile}" "${fasta_file}" && |
14 | 14 |
15 picard | 15 picard |
16 ReplaceSamHeader | 16 ReplaceSamHeader |
17 | 17 |
18 INPUT='$inputFile.element_identifier' | 18 INPUT='$escaped_element_identifier' |
19 HEADER="${header}" | 19 HEADER="${header}" |
20 OUTPUT="${outFile}" | 20 OUTPUT="${outFile}" |
21 | 21 |
22 QUIET=true | 22 QUIET=true |
23 VERBOSITY=ERROR | 23 VERBOSITY=ERROR |