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comparison picard_FixMateInformation.xml @ 19:5053a18d9bc8 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 7036343b9ac0a0ffc2ce4f6db465b9298ef05e73
author iuc
date Mon, 16 Apr 2018 21:27:29 -0400
parents 7e6fd3d0f16e
children 2a17c789e0a5
comparison
equal deleted inserted replaced
18:7615ac66c6e5 19:5053a18d9bc8
1 <tool name="FixMateInformation" id="picard_FixMateInformation" version="@TOOL_VERSION@.0"> 1 <tool name="FixMateInformation" id="picard_FixMateInformation" version="@TOOL_VERSION@.@WRAPPER_VERSION@">
2 <description>ensure that all mate-pair information is in sync between each read and it's mate pair</description> 2 <description>ensure that all mate-pair information is in sync between each read and it's mate pair</description>
3 <macros> 3 <macros>
4 <import>picard_macros.xml</import> 4 <import>picard_macros.xml</import>
5 <token name="@WRAPPER_VERSION@">0</token>
5 </macros> 6 </macros>
6 <expand macro="requirements" /> 7 <expand macro="requirements" />
7 <command detect_errors="exit_code"><![CDATA[ 8 <command detect_errors="exit_code"><![CDATA[
8 @java_options@ 9 @java_options@
9 picard 10 picard
70 MC=Boolean Adds the mate CIGAR tag (MC) if true, does not if false. Default value: true. 71 MC=Boolean Adds the mate CIGAR tag (MC) if true, does not if false. Default value: true.
71 72
72 @more_info@ 73 @more_info@
73 74
74 </help> 75 </help>
76 <expand macro="citations" />
75 </tool> 77 </tool>
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