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comparison picard_CollectInsertSizeMetrics.xml @ 31:585027e65f3b draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 70d2a66c405be58d4413753792bcadf212a4da84
author iuc
date Sat, 25 Feb 2023 20:33:49 +0000
parents 2a17c789e0a5
children f9242e01365a
comparison
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30:b502c227b5e6 31:585027e65f3b
1 <tool name="CollectInsertSizeMetrics" id="picard_CollectInsertSizeMetrics" version="@TOOL_VERSION@.@WRAPPER_VERSION@"> 1 <tool name="CollectInsertSizeMetrics" id="picard_CollectInsertSizeMetrics" version="@TOOL_VERSION@.@WRAPPER_VERSION@">
2 <description>plots distribution of insert sizes</description> 2 <description>plots distribution of insert sizes</description>
3 <macros> 3 <macros>
4 <import>picard_macros.xml</import> 4 <import>picard_macros.xml</import>
5 <token name="@WRAPPER_VERSION@">1</token> 5 <token name="@WRAPPER_VERSION@">2</token>
6 </macros> 6 </macros>
7 <expand macro="requirements"> 7 <expand macro="requirements">
8 <requirement type="package" version="3.4.1">r-base</requirement> 8 <requirement type="package" version="3.4.1">r-base</requirement>
9 </expand> 9 </expand>
10 <command detect_errors="exit_code"><![CDATA[ 10 <command detect_errors="exit_code"><![CDATA[
70 <expand macro="VS" /> 70 <expand macro="VS" />
71 71
72 </inputs> 72 </inputs>
73 73
74 <outputs> 74 <outputs>
75 <data format="tabular" name="outFile"/> 75 <data format="tabular" name="outFile" label="${tool.name} on ${on_string}: tabular"/>
76 <data format="pdf" name="histFile"/> 76 <data format="pdf" name="histFile" label="${tool.name} on ${on_string}: PDF"/>
77 </outputs> 77 </outputs>
78 78
79 <tests> 79 <tests>
80 <test> 80 <test>
81 <param name="metric_accumulation_level" value="ALL_READS"/> 81 <param name="metric_accumulation_level" value="ALL_READS"/>