Mercurial > repos > devteam > picard

comparison picard_CollectAlignmentSummaryMetrics.xml @ 9:5eaa8a968300 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit 1869970193a1878acbc0f8a79b81dd02b37f1dc1
author devteam
date Fri, 09 Oct 2015 17:43:13 -0400
parents 3a3234d7a2e8
children 777ccdd1d6e4
comparison
equal deleted inserted replaced
8:3a3234d7a2e8 9:5eaa8a968300
61 <option value="READ_GROUP">Read group</option> 61 <option value="READ_GROUP">Read group</option>
62 </param> 62 </param>
63 <param name="assume_sorted" type="boolean" label="Assume the input file is already sorted" checked="true" truevalue="true" falsevalue="false" help="ASSUME_SORTED"/> 63 <param name="assume_sorted" type="boolean" label="Assume the input file is already sorted" checked="true" truevalue="true" falsevalue="false" help="ASSUME_SORTED"/>
64 <param name="bisulphite" type="boolean" label="Input file contains Bisulphite sequenced reads" checked="false" falsevalue="false" truevalue="true" help="IS_BISULFITE_SEQUENCED"/> 64 <param name="bisulphite" type="boolean" label="Input file contains Bisulphite sequenced reads" checked="false" falsevalue="false" truevalue="true" help="IS_BISULFITE_SEQUENCED"/>
65 <repeat name="adapters" title="Adapter" min="0" help="You can provide multiple adaptor sequences"> 65 <repeat name="adapters" title="Adapter" min="0" help="You can provide multiple adaptor sequences">
66 <param name="adapter" type="text" size="50" label="Use this adaptor sequence" help="ADAPTER_SEQUENCE"/> 66 <param name="adapter" type="text" label="Use this adaptor sequence" help="ADAPTER_SEQUENCE"/>
67 </repeat> 67 </repeat>
68 <param name="maxinsert" value="100000" type="integer" label="Larger paired end reads and inter-chromosomal pairs considered chimeric" size="20" help="MAX_INSERT_SIZE"/> 68 <param name="maxinsert" value="100000" type="integer" label="Larger paired end reads and inter-chromosomal pairs considered chimeric" help="MAX_INSERT_SIZE"/>
69 69
70 <expand macro="VS" /> 70 <expand macro="VS" />
71 71
72 </inputs> 72 </inputs>
73 73