Mercurial > repos > devteam > picard
comparison picard_CollectAlignmentSummaryMetrics.xml @ 32:f9242e01365a draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 285fab1660daa944d6833ae1e059b30cb1e88309
author | iuc |
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date | Mon, 25 Sep 2023 08:32:17 +0000 |
parents | 585027e65f3b |
children | 3f254c5ced1d |
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31:585027e65f3b | 32:f9242e01365a |
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32 ASSUME_SORTED="${assume_sorted}" | 32 ASSUME_SORTED="${assume_sorted}" |
33 | 33 |
34 VALIDATION_STRINGENCY="${validation_stringency}" | 34 VALIDATION_STRINGENCY="${validation_stringency}" |
35 QUIET=true | 35 QUIET=true |
36 VERBOSITY=ERROR | 36 VERBOSITY=ERROR |
37 @TMPDIR_OPTION@ | |
38 | 37 |
39 ]]></command> | 38 ]]></command> |
40 <inputs> | 39 <inputs> |
41 <param format="sam,bam" name="inputFile" type="data" label="Select SAM/BAM dataset or dataset collection" help="If empty, upload or import a SAM/BAM dataset."/> | 40 <param format="sam,bam" name="inputFile" type="data" label="Select SAM/BAM dataset or dataset collection" help="If empty, upload or import a SAM/BAM dataset."/> |
42 <conditional name="reference_source"> | 41 <conditional name="reference_source"> |